Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1780 Acer truncatum HOM05D004219 ORTHO05D004857 2.3e-240 835.1 412 100.0
Gohir.A07G017500 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.4e-197 692.2 419 81.9
Gorai.001G018000 Gossypium raimondii HOM05D004219 ORTHO05D004857 5.4e-197 691.0 419 82.3
Ciclev10007563m.g Citrus clementina HOM05D004219 ORTHO05D004857 3.5e-196 688.3 418 82.5
Duzib168G0770 Durio zibethinus HOM05D004219 ORTHO05D004857 1.9e-194 682.6 419 81.4
Duzib187G1712 Durio zibethinus HOM05D004219 ORTHO05D004857 2.5e-194 682.2 419 80.9
Gohir.D07G017300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 1.3e-193 679.9 414 81.6
Duzib150G0120 Durio zibethinus HOM05D004219 ORTHO05D004857 6.2e-193 677.6 423 80.4
Thecc.09G069400 Theobroma cacao HOM05D004219 ORTHO05D004857 1.2e-191 673.3 419 79.7
Potri.006G135500 Populus trichocarpa HOM05D004219 ORTHO05D004857 2.2e-190 669.1 418 80.9
Potri.018G064500 Populus trichocarpa HOM05D004219 ORTHO05D004857 6.4e-190 667.5 416 80.3
Cpa.g.sc82.51 Carica papaya HOM05D004219 ORTHO05D004857 3.2e-189 665.2 417 79.4
TWI34G1001 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 4.2e-189 664.8 418 78.9
Sabra18G0057200 Salix brachista HOM05D004219 ORTHO05D004857 1.2e-188 663.3 416 80.0
Nn6g35715 Nelumbo nucifera HOM05D004219 ORTHO05D004857 6.0e-188 661.0 418 78.5
QL11p003182 Quercus lobata HOM05D004219 ORTHO05D004857 1.3e-187 659.8 429 77.2
Manes.16G089900 Manihot esculenta HOM05D004219 ORTHO05D004857 1.7e-187 659.4 419 79.7
Cfa002934 Carpinus fangiana HOM05D004219 ORTHO05D004857 1.5e-186 656.4 420 77.9
TWI63G0110 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 1.8e-184 649.4 418 77.8
Manes.03G045300 Manihot esculenta HOM05D004219 ORTHO05D004857 2.4e-184 649.0 418 77.0
TAR383G0549 Trochodendron aralioides HOM05D004219 ORTHO05D004857 4.5e-183 644.8 419 77.1
Gorai.010G095800 Gossypium raimondii HOM05D004219 ORTHO05D004857 1.7e-182 642.9 419 77.6
Gorai.009G038600 Gossypium raimondii HOM05D004219 ORTHO05D004857 1.4e-181 639.8 419 76.6
TAR624G1175 Trochodendron aralioides HOM05D004219 ORTHO05D004857 2.4e-181 639.0 428 75.5
Gohir.A05G036600 Gossypium hirsutum HOM05D004219 ORTHO05D004857 4.2e-181 638.3 419 75.9
Eucgr.C00764 Eucalyptus grandis HOM05D004219 ORTHO05D004857 1.2e-180 636.7 418 74.9
GSVIVG01015005001 Vitis vinifera HOM05D004219 ORTHO05D004857 2.1e-180 636.0 412 78.4
Gohir.A06G084100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 6.0e-180 634.4 420 77.4
MBI13_g01684_MAGBIO Magnolia biondii HOM05D004219 ORTHO05D004857 6.0e-180 634.4 416 76.0
Gohir.D05G038100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 1.8e-179 632.9 419 76.6
TAR626G0374 Trochodendron aralioides HOM05D004219 ORTHO05D004857 1.9e-178 629.4 387 79.3
Dinv20389 Davidia involucrata HOM05D004219 ORTHO05D004857 1.7e-174 616.3 416 73.6
CSS0038823 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 1.4e-173 613.2 418 73.2
CSS0000587 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 3.2e-173 612.1 418 73.2
Actinidia21828 Actinidia chinensis HOM05D004219 ORTHO05D004857 2.7e-172 609.0 417 72.2
GSVIVG01016680001 Vitis vinifera HOM05D004219 ORTHO05D004857 1.3e-169 600.1 418 72.0
Haze_26074 Corylus avellana HOM05D004219 ORTHO05D004857 3.7e-169 598.6 508 63.0
PGR142G3683 Punica granatum HOM05D004219 ORTHO05D004857 1.1e-168 597.0 418 72.7
Aqoxy7G00940 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 3.1e-168 595.5 419 71.8
Cc04_g00810 Coffea canephora HOM05D004219 ORTHO05D004857 2.0e-167 592.8 418 70.1
Gohir.D06G082300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.2e-166 589.3 419 72.3
Nitab4.5_0004589g0030 Nicotiana tabacum HOM05D004219 ORTHO05D004857 3.2e-165 585.5 418 69.4
PSO724G0293 Papaver somniferum HOM05D004219 ORTHO05D004857 7.1e-165 584.3 426 69.5
Cfa003467 Carpinus fangiana HOM05D004219 ORTHO05D004857 1.2e-164 583.6 419 68.7
Rhsim08G0243800 Rhododendron simsii HOM05D004219 ORTHO05D004857 1.2e-164 583.6 448 66.3
PGSC0003DMG400028852 Solanum tuberosum HOM05D004219 ORTHO05D004857 2.1e-164 582.8 418 69.6
CiPaw.01G212300 Carya illinoinensis HOM05D004219 ORTHO05D004857 3.5e-164 582.0 421 69.8
CANSAT56G2968 Cannabis sativa HOM05D004219 ORTHO05D004857 4.6e-164 581.6 418 69.4
MD17G1153300 Malus domestica HOM05D004219 ORTHO05D004857 7.9e-164 580.9 418 70.6
Nitab4.5_0000357g0090 Nicotiana tabacum HOM05D004219 ORTHO05D004857 1.0e-163 580.5 419 68.5
QL05p001749 Quercus lobata HOM05D004219 ORTHO05D004857 1.0e-163 580.5 419 69.2
Solyc12g049570.3 Solanum lycopersicum HOM05D004219 ORTHO05D004857 1.0e-163 580.5 418 69.4
Glyma.U031325 Glycine max HOM05D004219 ORTHO05D004857 1.8e-163 579.7 420 70.0
QL05p001473 Quercus lobata HOM05D004219 ORTHO05D004857 1.8e-163 579.7 419 69.2
PSO135G0149 Papaver somniferum HOM05D004219 ORTHO05D004857 5.1e-163 578.2 423 68.8
Prupe.3G031800 Prunus persica HOM05D004219 ORTHO05D004857 6.7e-163 577.8 419 70.6
vmacro15080 Vaccinium macrocarpon HOM05D004219 ORTHO05D004857 1.1e-162 577.0 435 66.2
Sopen12g024040 Solanum pennellii HOM05D004219 ORTHO05D004857 1.5e-162 576.6 418 69.1
VMungo1309G2772 Vigna mungo HOM05D004219 ORTHO05D004857 1.5e-162 576.6 422 70.1
Thhalv10002415m.g Eutrema salsugineum HOM05D004219 ORTHO05D004857 1.9e-162 576.2 416 69.0
Lj6g0016067 Lotus japonicus HOM05D004219 ORTHO05D004857 2.5e-162 575.9 421 69.8
CARHR153440 Cardamine hirsuta HOM05D004219 ORTHO05D004857 3.3e-162 575.5 411 70.1
Lj5A30T66 Lonicera japonica HOM05D004219 ORTHO05D004857 3.3e-162 575.5 406 70.9
Sp5g18450 Schrenkiella parvula HOM05D004219 ORTHO05D004857 5.7e-162 574.7 415 69.4
Phvul.009G223200 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 2.8e-161 572.4 422 69.4
MD09G1173700 Malus domestica HOM05D004219 ORTHO05D004857 3.7e-161 572.0 418 69.4
Peaxi162Scf00177g00619 Petunia axillaris HOM05D004219 ORTHO05D004857 4.8e-161 571.6 419 68.7
CiPaw.02G131700 Carya illinoinensis HOM05D004219 ORTHO05D004857 1.4e-160 570.1 419 67.8
CAN.G1721.2 Capsicum annuum HOM05D004219 ORTHO05D004857 3.1e-160 568.9 417 67.6
AL5G21340 Arabidopsis lyrata HOM05D004219 ORTHO05D004857 6.9e-160 567.8 420 68.3
Carub.0005s0906 Capsella rubella HOM05D004219 ORTHO05D004857 1.2e-159 567.0 417 68.6
Glyma.09G074300 Glycine max HOM05D004219 ORTHO05D004857 2.0e-159 566.2 421 69.6
Lalb_Chr08g0232811 Lupinus albus HOM05D004219 ORTHO05D004857 3.4e-159 565.5 421 68.9
Medtr2g044550 Medicago truncatula HOM05D004219 ORTHO05D004857 4.5e-159 565.1 425 68.9
Oeu059024.1 Olea europaea HOM05D004219 ORTHO05D004857 1.3e-158 563.5 418 66.7
AT3G43240 Arabidopsis thaliana HOM05D004219 ORTHO05D004857 3.8e-158 562.0 419 67.8
Ca_02284_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 5.0e-158 561.6 431 68.4
EL10Ac7g16483 Beta vulgaris HOM05D004219 ORTHO05D004857 1.6e-156 556.6 412 67.2
Lalb_Chr23g0276141 Lupinus albus HOM05D004219 ORTHO05D004857 3.6e-156 555.4 422 68.5
THA.LOC104799604 Tarenaya hassleriana HOM05D004219 ORTHO05D004857 6.1e-156 554.7 419 68.3
COL.COLO4_21198 Corchorus olitorius HOM05D004219 ORTHO05D004857 1.8e-155 553.1 418 68.4
A06p22640 Brassica napus HOM05D004219 ORTHO05D004857 2.3e-155 552.7 418 66.3
Migut.I01126 Erythranthe guttata HOM05D004219 ORTHO05D004857 5.1e-155 551.6 425 64.9
Glyma.07G045100 Glycine max HOM05D004219 ORTHO05D004857 2.0e-154 549.7 414 65.9
Glyma.16G013100 Glycine max HOM05D004219 ORTHO05D004857 3.3e-154 548.9 414 65.9
BcaC01g02109 Brassica carinata HOM05D004219 ORTHO05D004857 4.3e-154 548.5 418 65.8
TPR.G26875 Trifolium pratense HOM05D004219 ORTHO05D004857 4.3e-154 548.5 425 66.8
SGA_v2.0_scaffold71G23915 Striga asiatica HOM05D004219 ORTHO05D004857 7.4e-154 547.7 419 64.9
FAN09G1853 Fragaria x ananassa HOM05D004219 ORTHO05D004857 1.7e-153 546.6 418 66.5
BcaB01g01229 Brassica carinata HOM05D004219 ORTHO05D004857 2.8e-153 545.8 418 66.0
CDE04G3533 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 3.7e-153 545.4 410 67.8
RcHm_v2.0_Chr2g0147711 Rosa chinensis HOM05D004219 ORTHO05D004857 3.7e-153 545.4 418 66.3
FvH4_6g35710 Fragaria vesca HOM05D004219 ORTHO05D004857 6.3e-153 544.7 418 66.3
FAN14G4832 Fragaria x ananassa HOM05D004219 ORTHO05D004857 6.3e-153 544.7 418 66.3
Hund05707 Selenicereus undatus HOM05D004219 ORTHO05D004857 8.2e-153 544.3 410 66.3
Sc15g0000780 Simmondsia chinensis HOM05D004219 ORTHO05D004857 8.2e-153 544.3 418 65.3
Phvul.010G123900 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 1.1e-152 543.9 414 65.5
ATR0099G075 Amborella trichopoda HOM05D004219 ORTHO05D004857 2.4e-152 542.7 413 67.3
Sed0001277 Sechium edule HOM05D004219 ORTHO05D004857 9.1e-152 540.8 418 64.8
Psat1g137920 Pisum sativum HOM05D004219 ORTHO05D004857 1.5e-151 540.0 426 66.0
FAN02G2730 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.4e-151 538.9 418 65.3
HPP92_019289 Vanilla planifolia HOM05D004219 ORTHO05D004857 3.4e-151 538.9 408 65.0
AUR62025624 Chenopodium quinoa HOM05D004219 ORTHO05D004857 5.9e-151 538.1 423 64.8
Sed0013084 Sechium edule HOM05D004219 ORTHO05D004857 5.9e-151 538.1 419 65.6
BolC3t19092H Brassica oleracea HOM05D004219 ORTHO05D004857 2.2e-150 536.2 421 64.8
HanXRQChr09g0277221 Helianthus annuus HOM05D004219 ORTHO05D004857 1.9e-149 533.1 398 67.6
ClCG09G001310 Citrullus lanatus HOM05D004219 ORTHO05D004857 5.5e-149 531.6 419 65.6
DCAR_016092 Daucus carota HOM05D004219 ORTHO05D004857 5.5e-149 531.6 412 66.0
MELO3C022696.2 Cucumis melo HOM05D004219 ORTHO05D004857 1.2e-148 530.4 421 65.8
TPR.G18148 Trifolium pratense HOM05D004219 ORTHO05D004857 1.0e-147 527.3 420 63.3
VMungo0331G1133 Vigna mungo HOM05D004219 ORTHO05D004857 3.9e-147 525.4 414 63.8
ECA232G2871 Erigeron canadensis HOM05D004219 ORTHO05D004857 1.1e-146 523.9 419 64.2
ClCG07G014320 Citrullus lanatus HOM05D004219 ORTHO05D004857 1.5e-146 523.5 430 63.5
CsaV3_3G030980 Cucumis sativus L. HOM05D004219 ORTHO05D004857 1.5e-146 523.5 421 64.6
Lj3g0000905 Lotus japonicus HOM05D004219 ORTHO05D004857 1.5e-146 523.5 414 64.5
CsaV3_7G034010 Cucumis sativus L. HOM05D004219 ORTHO05D004857 5.7e-146 521.5 419 65.2
Sabra06G0106200 Salix brachista HOM05D004219 ORTHO05D004857 2.8e-145 519.2 410 68.5
Ca_23428_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 3.7e-145 518.8 420 63.6
Medtr8g022980 Medicago truncatula HOM05D004219 ORTHO05D004857 7.0e-144 514.6 417 62.8
Aqoxy7G04168 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 2.6e-143 512.7 409 63.3
Ah.08g217310 Amaranthus hybridus HOM05D004219 ORTHO05D004857 3.5e-143 512.3 410 62.9
Psat4g165840 Pisum sativum HOM05D004219 ORTHO05D004857 3.5e-143 512.3 421 61.8
MELO3C024313.2 Cucumis melo HOM05D004219 ORTHO05D004857 5.9e-143 511.5 409 65.5
Lalb_Chr04g0253891 Lupinus albus HOM05D004219 ORTHO05D004857 5.9e-143 511.5 415 63.6
Lalb_Chr17g0343311 Lupinus albus HOM05D004219 ORTHO05D004857 1.3e-142 510.4 414 63.0
Zm00001eb313820 Zea mays HOM05D004219 ORTHO05D004857 2.5e-141 506.1 422 60.2
arahy.Tifrunner.gnm1.ann1.82J223 Arachis hypogaea HOM05D004219 ORTHO05D004857 3.2e-141 505.8 425 63.1
Aa31LG4G12950 Aethionema arabicum HOM05D004219 ORTHO05D004857 2.7e-140 502.7 436 60.8
Sed0013718 Sechium edule HOM05D004219 ORTHO05D004857 8.0e-140 501.1 421 63.4
arahy.Tifrunner.gnm1.ann1.BBC6WZ Arachis hypogaea HOM05D004219 ORTHO05D004857 1.8e-139 500.0 424 61.8
Zm00001eb099960 Zea mays HOM05D004219 ORTHO05D004857 6.7e-139 498.0 422 59.7
Os08g0451400 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.6e-135 486.9 422 58.3
Lsat_1_v5_gn_4_92081 Lactuca sativa HOM05D004219 ORTHO05D004857 3.2e-133 479.2 406 63.3
Haze_16129 Corylus avellana HOM05D004219 ORTHO05D004857 3.0e-131 472.6 457 56.2
CDE06G0638 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 4.2e-125 452.2 411 59.4
PGR044G2279 Punica granatum HOM05D004219 ORTHO05D004857 5.4e-120 435.3 420 56.4
Hma1.2p1_0229F.1_g097030 Hydrangea macrophylla HOM05D004219 ORTHO05D004857 2.0e-119 433.3 365 62.7
Zm00001eb040700 Zea mays HOM05D004219 ORTHO05D004857 1.5e-117 427.2 387 56.1
Eucgr.I02158 Eucalyptus grandis HOM05D004219 ORTHO05D004857 1.8e-115 420.2 407 55.3
unitig_26.g8917 Utricularia gibba HOM05D004219 ORTHO05D004857 5.4e-112 408.7 421 53.0
Os08g0451700 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 5.9e-111 405.2 421 50.1
Actinidia24435 Actinidia chinensis HOM05D004219 ORTHO05D004857 2.7e-103 379.8 283 64.0
AUR62001416 Chenopodium quinoa HOM05D004219 ORTHO05D004857 4.6e-95 352.4 410 48.5
Mapoly0094s0004 Marchantia polymorpha HOM05D004219 ORTHO05D004857 3.9e-86 322.8 383 44.9
Os09g0434100 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 8.9e-83 311.6 277 56.3
Pp3c15_1350 Physcomitrium patens HOM05D004219 ORTHO05D004857 4.9e-73 279.3 385 41.6
SMO133G0025 Selaginella moellendorffii HOM05D004219 ORTHO05D004857 3.9e-70 269.6 409 40.8
Pp3c6_26590 Physcomitrium patens HOM05D004219 ORTHO05D004857 2.5e-69 266.9 382 40.8
unitig_749.g14036 Utricularia gibba HOM05D004219 ORTHO05D004857 1.6e-60 237.7 282 45.7
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 4.8e-60 236.1 370 37.6
Medtr8g038730 Medicago truncatula HOM05D004219 ORTHO05D004857 2.9e-57 226.9 199 58.3
Nn5g27342 Nelumbo nucifera HOM05D004219 ORTHO05D004857 1.1e-51 208.4 142 71.8
CBR_g66811 Chara braunii HOM05D004219 ORTHO05D004857 7.6e-50 202.2 399 33.6
TAR383G0322 Trochodendron aralioides HOM05D004219 ORTHO05D004857 3.0e-46 190.3 149 65.8
AagrBONN_evm.TU.Sc2ySwM_344.4361 Anthoceros agrestis HOM05D004219 ORTHO05D004857 3.3e-37 160.2 187 46.0
BraA06t25350Z Brassica rapa HOM05D004219 ORTHO05D004857 3.3e-29 133.7 89 75.3
Os08g0361000 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 6.3e-28 129.4 172 41.3
Os08g0451500 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 5.5e-24 116.3 142 41.5
Cre10.g429880 Chlamydomonas reinhardtii HOM05D004219 ORTHO05D004857 2.8e-20 104.0 386 24.9
Oeu028234.1 Olea europaea HOM05D004219 ORTHO05D004857 9.8e-13 79.0 73 52.1
unitig_749.g14037 Utricularia gibba HOM05D004219 ORTHO05D004857 1.7e-12 78.2 47 76.6
AUR62025956 Chenopodium quinoa HOM05D000121 ORTHO05D024978 3.1e-11 73.9 66 57.6
arahy.Tifrunner.gnm1.ann1.B45F8N Arachis hypogaea HOM05D004219 ORTHO05D004857 4.0e-06 57.0 32 87.5
arahy.Tifrunner.gnm1.ann1.W70I1I Arachis hypogaea HOM05D004219 ORTHO05D004857 4.0e-06 57.0 32 87.5


User provided reference genes

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