Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 9.4e-130 466.8 233 100.0
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 4.4e-119 431.4 234 91.9
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 2.8e-118 428.7 234 91.5
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.4e-117 426.4 238 89.9
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 7.0e-117 424.1 234 91.0
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 9.1e-117 423.7 236 89.4
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 4.5e-116 421.4 233 89.7
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 1.3e-115 419.9 242 88.0
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.7e-115 419.5 236 89.0
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 2.9e-115 418.7 235 88.9
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 2.5e-114 415.6 234 88.9
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 4.2e-114 414.8 236 88.1
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.2e-113 413.3 236 87.3
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.1e-113 412.5 240 85.8
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 2.8e-113 412.1 233 88.0
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 3.6e-113 411.8 233 88.8
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 4.7e-113 411.4 234 88.5
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 1.4e-112 409.8 235 86.4
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.8e-112 409.5 233 86.7
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 1.8e-112 409.5 233 86.3
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 1.8e-112 409.5 233 87.1
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.8e-112 409.5 239 86.2
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 3.0e-112 408.7 241 84.2
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 4.0e-112 408.3 233 85.8
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 5.2e-112 407.9 233 86.3
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 5.2e-112 407.9 233 86.3
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 5.2e-112 407.9 226 89.4
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 6.8e-112 407.5 238 86.6
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.8e-112 407.5 233 85.8
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.8e-112 407.5 233 85.8
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 8.8e-112 407.1 233 86.7
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-111 406.4 233 85.8
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-111 406.4 233 85.4
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 4.4e-111 404.8 236 86.0
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 5.7e-111 404.4 233 85.4
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 9.8e-111 403.7 235 87.7
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 9.8e-111 403.7 234 85.9
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.3e-110 403.3 233 86.3
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 2.2e-110 402.5 248 83.5
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 3.7e-110 401.7 233 85.0
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 4.9e-110 401.4 233 85.0
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 4.9e-110 401.4 233 85.4
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 6.3e-110 401.0 233 83.7
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 6.3e-110 401.0 233 84.1
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 8.3e-110 400.6 233 86.3
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 8.3e-110 400.6 233 83.7
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 1.1e-109 400.2 233 84.5
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.4e-109 399.8 233 82.0
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 4.1e-109 398.3 239 84.1
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 4.1e-109 398.3 233 85.4
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 5.4e-109 397.9 231 85.7
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 9.2e-109 397.1 239 84.1
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 1.2e-108 396.7 233 84.5
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.6e-108 396.4 233 84.5
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.6e-108 396.4 233 84.5
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.6e-108 396.4 237 83.1
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 3.5e-108 395.2 233 83.3
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 4.5e-108 394.8 232 82.3
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 1.7e-107 392.9 234 83.3
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 1.9e-106 389.4 234 82.5
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 7.3e-106 387.5 236 81.8
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 9.5e-106 387.1 233 80.7
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 2.8e-105 385.6 237 83.5
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 1.0e-104 383.6 222 82.9
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.4e-104 383.3 236 81.8
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 2.3e-104 382.5 239 78.2
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 4.0e-104 381.7 229 84.3
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 6.8e-104 380.9 240 77.9
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 8.9e-104 380.6 234 82.5
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 8.9e-104 380.6 222 82.4
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 2.0e-103 379.4 238 79.8
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 4.4e-103 378.3 233 79.8
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 4.4e-103 378.3 229 80.3
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 4.4e-103 378.3 222 81.5
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 9.8e-103 377.1 229 80.3
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 1.7e-102 376.3 233 79.0
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 2.2e-102 375.9 233 80.3
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 2.2e-102 375.9 224 82.6
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 3.7e-102 375.2 230 80.4
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 6.4e-102 374.4 240 79.2
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 8.3e-102 374.0 233 78.5
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 8.3e-102 374.0 233 78.5
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.8e-101 372.9 234 78.6
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 3.2e-101 372.1 232 79.7
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 3.2e-101 372.1 220 81.4
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 5.4e-101 371.3 233 79.4
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 5.4e-101 371.3 234 78.6
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 5.4e-101 371.3 233 78.5
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 9.2e-101 370.5 223 80.3
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 1.6e-100 369.8 229 79.9
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 1.6e-100 369.8 233 76.8
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 2.0e-100 369.4 234 77.4
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.7e-100 369.0 238 79.0
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 3.5e-100 368.6 232 79.3
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 3.5e-100 368.6 233 77.7
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 1.3e-99 366.7 224 79.5
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.3e-99 366.7 220 80.5
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 1.7e-99 366.3 220 79.5
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 3.0e-99 365.5 233 75.5
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.1e-98 363.6 229 79.0
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 4.3e-98 361.7 233 79.4
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 5.6e-98 361.3 234 78.2
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.6e-97 359.8 304 62.5
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 1.6e-97 359.8 233 76.0
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 3.6e-97 358.6 229 78.6
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 2.3e-96 355.9 258 70.2
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.2e-95 353.6 233 79.0
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 9.8e-95 350.5 329 60.2
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 2.9e-94 349.0 240 75.0
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.1e-93 345.1 233 74.2
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 1.2e-92 343.6 227 74.0
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 6.6e-91 337.8 187 88.2
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 1.9e-90 336.3 223 70.4
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 2.5e-90 335.9 233 72.1
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 1.6e-89 333.2 233 72.5
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 2.3e-88 329.3 233 70.8
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 1.9e-85 319.7 198 78.3
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 7.1e-85 317.8 192 79.7
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 2.7e-84 315.8 230 65.2
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 4.6e-84 315.1 234 71.4
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 6.0e-84 314.7 231 65.4
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 7.8e-84 314.3 193 79.3
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 3.0e-83 312.4 224 65.2
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.5e-82 310.1 198 78.3
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 9.6e-74 280.8 197 71.6
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 6.2e-73 278.1 168 78.6
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 1.4e-69 266.9 162 82.1
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 5.6e-66 255.0 226 61.5
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 4.0e-56 222.2 154 66.9
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 2.4e-53 213.0 218 49.1
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 5.5e-45 185.3 119 73.1
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 7.6e-39 164.9 105 81.9
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 6.7e-35 151.8 189 38.1
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 2.2e-33 146.7 97 79.4
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 5.9e-23 112.1 208 32.2
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.6e-12 77.4 72 50.0


User provided reference genes

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