Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 3.1e-95 352.1 211 100.0
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 1.7e-37 160.2 215 47.4
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 3.6e-35 152.5 218 46.8
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.7e-30 134.8 214 41.6
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 2.2e-29 133.3 224 39.3
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.9e-29 132.9 215 41.4
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.4e-28 130.6 215 40.9
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 1.4e-28 130.6 212 41.0
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 3.2e-28 129.4 214 43.5
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 4.2e-28 129.0 216 37.5
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 7.2e-28 128.3 197 38.6
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 9.4e-28 127.9 201 41.3
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 1.6e-27 127.1 230 38.3
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 3.6e-27 125.9 217 39.2
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 1.0e-26 124.4 205 41.0
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 3.0e-26 122.9 213 39.9
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 3.0e-26 122.9 222 39.6
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.5e-25 120.6 211 38.4
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 2.6e-25 119.8 201 38.3
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 7.4e-25 118.2 209 45.9
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.3e-24 117.5 198 38.4
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 3.7e-24 115.9 203 37.4
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 4.8e-24 115.5 212 38.2
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 6.3e-24 115.2 202 38.6
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.1e-23 114.4 202 40.6
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.1e-23 114.4 207 38.6
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.4e-23 113.2 202 38.1
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 3.1e-23 112.8 221 37.1
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 7.0e-23 111.7 216 38.0
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 7.0e-23 111.7 212 38.7
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.2e-22 110.9 200 36.5
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.2e-22 110.9 200 36.5
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 1.5e-22 110.5 212 39.6
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.5e-22 110.5 200 38.0
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 3.5e-22 109.4 215 35.3
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 4.5e-22 109.0 198 39.4
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 5.9e-22 108.6 205 38.0
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.3e-21 107.5 198 36.9
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 1.3e-21 107.5 200 37.0
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.3e-21 107.5 204 35.8
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.7e-21 107.1 204 35.8
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.7e-21 107.1 212 36.8
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.2e-21 106.7 197 35.5
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 2.9e-21 106.3 221 33.9
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 5.0e-21 105.5 204 37.3
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 8.5e-21 104.8 203 37.9
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 1.1e-20 104.4 202 36.6
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.1e-20 104.4 225 39.6
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 1.5e-20 104.0 212 34.0
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.5e-20 104.0 200 36.0
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 1.5e-20 104.0 212 34.0
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.5e-20 104.0 213 37.1
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.9e-20 103.6 201 36.3
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.9e-20 103.6 201 36.3
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 2.5e-20 103.2 202 35.6
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 2.5e-20 103.2 214 34.6
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 3.2e-20 102.8 200 36.5
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 3.2e-20 102.8 202 36.6
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 4.2e-20 102.4 214 34.6
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 5.5e-20 102.1 200 36.5
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 5.5e-20 102.1 226 31.0
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 5.5e-20 102.1 195 36.9
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 7.2e-20 101.7 213 34.3
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 7.2e-20 101.7 200 36.5
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 7.2e-20 101.7 213 34.3
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 7.2e-20 101.7 200 36.5
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 7.2e-20 101.7 201 35.3
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 9.4e-20 101.3 203 35.5
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.2e-19 100.9 223 34.1
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.2e-19 100.9 202 36.1
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 1.6e-19 100.5 203 37.4
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.7e-19 99.8 202 41.6
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.7e-19 99.0 191 36.1
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 4.7e-19 99.0 199 35.2
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 4.7e-19 99.0 200 35.5
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 8.0e-19 98.2 197 35.5
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 8.0e-19 98.2 230 32.6
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 1.0e-18 97.8 198 37.4
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.4e-18 97.4 198 36.4
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.8e-18 97.1 216 38.4
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 6.7e-18 95.1 217 34.1
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.1e-17 94.4 199 42.7
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.5e-17 94.0 215 45.6
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.0e-17 93.6 210 35.2
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 3.3e-17 92.8 223 30.0
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 5.7e-17 92.0 204 34.3
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 5.7e-17 92.0 199 33.2
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 9.7e-17 91.3 203 34.5
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 9.7e-17 91.3 196 36.2
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 9.7e-17 91.3 204 35.3
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.3e-16 90.9 194 35.6
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 1.3e-16 90.9 214 33.2
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.3e-16 90.9 210 33.8
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 1.7e-16 90.5 209 30.6
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 3.7e-16 89.4 210 31.9
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 6.3e-16 88.6 200 33.0
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 1.4e-15 87.4 197 32.5
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 3.1e-15 86.3 225 34.2
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 5.3e-15 85.5 204 33.8
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.2e-14 84.3 198 34.3
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 2.0e-14 83.6 208 31.7
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 3.8e-13 79.3 202 41.6
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 3.8e-13 79.3 203 34.5
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 5.0e-13 79.0 201 33.3
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.1e-12 77.8 200 32.5
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 1.9e-12 77.0 199 34.2
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 2.5e-12 76.6 206 33.0
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 2.5e-12 76.6 211 34.6
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 2.5e-12 76.6 195 31.3
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 3.2e-12 76.3 199 31.7
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 8.0e-11 71.6 204 27.9
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.4e-10 70.9 191 31.9
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 3.0e-10 69.7 206 32.0
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 5.2e-10 68.9 196 29.6
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.4e-09 66.2 201 27.4
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 4.4e-09 65.9 211 30.8
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 4.4e-09 65.9 43 69.8
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 7.5e-09 65.1 214 28.0
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 7.5e-09 65.1 72 55.6
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 9.8e-09 64.7 193 27.5
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.8e-08 63.2 43 67.4
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 1.1e-07 61.2 197 39.1
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 3.1e-07 59.7 193 34.7
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 4.1e-07 59.3 203 33.5
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 2.7e-06 56.6 94 35.1


User provided reference genes

Program Settings