Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 6.0e-203 710.7 373 100.0
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.2e-166 590.1 382 80.6
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.5e-166 589.7 375 81.9
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.1e-164 583.6 375 81.6
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.6e-163 579.7 372 80.9
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 3.6e-163 578.6 358 83.0
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.3e-162 576.6 375 80.3
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 3.0e-162 575.5 360 82.8
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 3.0e-162 575.5 356 82.9
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 3.0e-162 575.5 372 81.5
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 3.0e-162 575.5 362 79.6
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.7e-162 573.9 354 81.9
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.1e-161 573.5 379 79.9
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.1e-161 573.5 379 79.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 4.3e-161 571.6 379 81.0
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 9.7e-161 570.5 391 79.0
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.3e-160 570.1 366 82.0
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 2.2e-160 569.3 352 83.8
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 2.8e-160 568.9 360 82.8
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 2.8e-160 568.9 361 83.4
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 2.8e-160 568.9 361 83.4
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.3e-160 567.8 380 79.5
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 8.2e-160 567.4 369 80.2
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 8.2e-160 567.4 386 79.0
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.1e-159 567.0 351 81.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.1e-159 567.0 361 82.5
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.1e-159 567.0 378 78.0
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.4e-159 566.6 357 81.5
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.4e-159 566.6 380 79.5
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 4.1e-159 565.1 376 80.3
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 4.1e-159 565.1 360 82.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 5.3e-159 564.7 379 77.6
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 5.3e-159 564.7 351 80.6
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 5.3e-159 564.7 377 80.4
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 5.3e-159 564.7 357 82.6
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 6.9e-159 564.3 381 80.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 6.9e-159 564.3 380 80.0
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.9e-159 564.3 357 82.1
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 9.1e-159 563.9 361 83.1
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 9.1e-159 563.9 373 80.7
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.2e-158 563.5 380 78.4
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.2e-158 563.5 378 77.5
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.6e-158 562.4 355 80.0
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 3.4e-158 562.0 372 76.9
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 7.7e-158 560.8 380 79.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 7.7e-158 560.8 372 78.0
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.0e-157 560.5 361 82.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.0e-157 560.5 361 82.8
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 2.2e-157 559.3 356 82.0
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 3.8e-157 558.5 347 83.6
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.8e-157 558.5 347 83.6
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 5.0e-157 558.1 390 77.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 6.5e-157 557.8 382 79.6
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 6.5e-157 557.8 360 82.2
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 8.5e-157 557.4 383 73.9
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-156 557.0 355 78.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 3.2e-156 555.4 364 78.8
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.2e-156 555.1 357 81.5
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 4.2e-156 555.1 390 76.7
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.2e-156 554.3 357 81.8
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.2e-156 554.3 357 81.5
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.2e-155 553.5 338 81.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.2e-155 553.5 358 77.4
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.6e-155 553.1 360 80.8
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.1e-155 552.7 360 80.8
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.0e-154 550.4 379 75.5
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.4e-154 550.1 353 78.5
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.4e-154 550.1 348 79.3
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.4e-154 550.1 391 76.7
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.8e-154 549.7 362 78.7
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-154 549.7 360 80.6
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.0e-154 548.9 376 75.3
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.0e-154 548.9 389 76.1
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 6.7e-154 547.7 373 76.7
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 6.7e-154 547.7 348 77.6
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.1e-153 547.0 371 74.9
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.1e-153 547.0 359 75.5
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.5e-153 546.6 381 76.6
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.0e-153 546.2 359 77.2
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.6e-153 545.8 379 73.1
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.3e-153 545.4 379 73.6
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 5.7e-153 544.7 368 77.2
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 5.7e-153 544.7 386 72.5
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 7.4e-153 544.3 357 76.5
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 3.7e-152 542.0 328 81.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 3.7e-152 542.0 362 77.3
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 4.8e-152 541.6 330 81.2
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 6.3e-152 541.2 351 76.9
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 6.3e-152 541.2 382 73.0
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 8.2e-152 540.8 360 78.6
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 8.2e-152 540.8 372 74.5
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 8.2e-152 540.8 382 72.8
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.1e-151 540.4 378 72.8
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.1e-151 540.4 375 76.0
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 3.1e-151 538.9 379 72.6
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 3.1e-151 538.9 350 75.4
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.2e-150 537.0 369 77.8
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.6e-150 535.8 359 76.3
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 3.4e-150 535.4 399 73.2
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 4.5e-150 535.0 375 74.7
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 5.9e-150 534.6 329 82.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 7.7e-150 534.3 346 77.2
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.7e-149 533.1 372 76.3
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.9e-149 532.3 360 74.2
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 2.9e-149 532.3 376 77.4
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 6.5e-149 531.2 369 76.2
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.2e-148 528.5 390 73.3
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.2e-148 528.5 385 72.7
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 4.2e-148 528.5 370 74.1
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 7.2e-148 527.7 383 74.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 2.7e-147 525.8 332 77.1
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 4.7e-147 525.0 379 72.8
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.0e-146 523.9 469 62.7
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.0e-146 523.9 398 68.6
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.4e-143 512.7 304 81.2
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 7.0e-143 511.1 360 71.9
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 4.5e-142 508.4 329 77.2
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 7.7e-142 507.7 323 76.8
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.8e-141 505.4 339 75.5
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 2.5e-140 502.7 355 71.0
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.2e-140 501.9 347 72.3
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.2e-139 500.4 367 72.2
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.1e-135 485.7 370 68.6
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-134 483.8 358 74.6
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.5e-134 481.9 378 70.1
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 4.5e-134 481.9 269 84.8
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 3.8e-133 478.8 306 80.4
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.5e-133 478.0 303 82.2
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 4.7e-131 471.9 374 69.8
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.3e-130 469.5 378 68.5
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.2e-129 467.2 293 81.9
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 5.7e-129 464.9 300 75.7
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 4.8e-128 461.8 394 63.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.1e-127 460.7 360 69.2
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.0e-126 456.4 393 65.4
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 1.0e-122 444.1 340 62.6
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.8e-120 436.0 320 65.3
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.1e-119 432.2 351 64.1
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.0e-118 429.9 298 67.1
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.0e-117 427.6 299 67.2
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.3e-117 427.2 363 59.8
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.1e-116 424.1 262 79.0
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.6e-115 420.2 298 65.4
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 2.9e-112 409.5 221 90.0
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 1.1e-111 407.5 420 54.8
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 4.1e-111 405.6 303 64.0
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.2e-110 404.1 352 62.5
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 7.5e-105 384.8 382 59.7
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.9e-100 370.2 240 77.5
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.9e-92 343.6 300 57.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.1e-86 323.6 211 71.1
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.5e-84 316.6 241 71.4
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 3.3e-68 263.1 150 84.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.9e-63 247.3 351 46.4
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 4.9e-56 222.6 196 59.7
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.6e-54 217.6 170 70.0
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.4e-42 177.9 174 56.3
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.4e-34 150.6 95 77.9
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.1e-28 131.7 293 30.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.6e-28 130.6 93 69.9
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 5.0e-24 116.3 335 28.4
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.9e-23 114.4 297 28.3
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 1.6e-22 111.3 65 76.9
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.0e-21 107.1 240 34.2
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 3.7e-19 100.1 67 74.6
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 3.7e-19 100.1 67 74.6
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 3.1e-18 97.1 67 73.1
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 5.9e-17 92.8 69 72.5
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-16 90.9 59 74.6
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.9e-16 90.5 377 25.2
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.2e-15 87.0 90 67.8
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 8.0e-14 82.4 87 67.8
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.8e-10 71.2 108 34.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.2e-09 68.6 33 93.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 8.6e-08 62.4 49 63.3
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.5e-07 61.6 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.5e-07 60.8 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 3.3e-07 60.5 38 73.7


User provided reference genes

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