Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 6.3e-168 594.0 287 100.0
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 2.1e-107 392.9 286 66.1
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 1.8e-106 389.8 270 70.7
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.2e-105 387.1 286 65.4
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 2.0e-105 386.3 291 65.3
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 3.4e-105 385.6 277 67.5
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 5.4e-103 378.3 278 66.5
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.6e-102 376.7 277 66.4
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.1e-102 376.3 272 66.2
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.9e-100 369.8 291 61.2
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 4.3e-100 368.6 268 67.9
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 7.3e-100 367.9 274 64.6
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 2.8e-99 365.9 277 66.4
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 3.6e-99 365.5 268 67.2
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 4.7e-99 365.2 274 65.0
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 4.7e-99 365.2 268 64.6
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 8.1e-99 364.4 274 65.3
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.1e-98 364.0 290 60.7
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 3.1e-98 362.5 292 62.3
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.2e-97 360.5 270 64.4
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.5e-97 360.1 266 62.8
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 5.8e-97 358.2 273 63.7
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 7.6e-97 357.8 267 62.2
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.7e-96 356.7 265 62.6
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 2.2e-96 356.3 278 62.6
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.9e-96 355.9 278 62.6
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 4.9e-96 355.1 265 62.3
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 6.4e-96 354.8 286 61.5
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 8.4e-96 354.4 289 62.3
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-95 354.0 266 64.3
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 3.2e-95 352.4 265 62.6
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 4.2e-95 352.1 278 61.9
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 9.3e-95 350.9 269 62.5
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.1e-94 349.7 307 58.3
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 1.3e-93 347.1 297 58.6
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 1.9e-92 343.2 292 59.9
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 9.6e-92 340.9 266 62.4
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 9.6e-92 340.9 266 62.4
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 9.6e-92 340.9 269 63.9
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 9.6e-92 340.9 272 61.0
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.6e-91 340.1 268 61.6
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 2.1e-91 339.7 270 61.9
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 2.1e-91 339.7 270 61.9
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 2.8e-91 339.3 270 61.9
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 2.8e-91 339.3 275 62.9
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 3.6e-91 339.0 289 60.2
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 8.1e-91 337.8 266 61.7
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 1.8e-90 336.7 272 59.6
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 4.0e-90 335.5 244 66.8
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 2.6e-89 332.8 273 60.8
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 3.4e-89 332.4 273 60.8
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 2.2e-88 329.7 264 61.7
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 2.9e-88 329.3 263 61.6
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.8e-88 328.9 286 60.5
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 4.9e-88 328.6 296 56.4
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 8.4e-88 327.8 278 59.4
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.9e-87 326.6 263 61.6
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.9e-87 326.6 263 61.6
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.4e-87 326.2 263 61.2
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 3.2e-87 325.9 292 56.5
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 5.4e-87 325.1 283 53.7
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 7.1e-87 324.7 276 58.3
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 2.7e-86 322.8 268 62.3
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 3.5e-86 322.4 287 57.5
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 3.5e-86 322.4 288 56.9
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 1.3e-85 320.5 271 56.1
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 2.3e-85 319.7 275 57.5
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 7.4e-84 314.7 216 70.8
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.1e-83 313.2 271 57.6
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 2.1e-83 313.2 273 56.4
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 3.7e-83 312.4 273 56.8
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-82 310.8 274 57.3
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 1.1e-82 310.8 270 58.9
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 1.1e-82 310.8 272 58.8
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 3.1e-82 309.3 264 53.8
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 5.3e-82 308.5 270 56.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.3e-82 308.5 270 57.8
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 9.0e-82 307.8 274 56.9
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 2.6e-81 306.2 297 55.6
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 3.4e-81 305.8 310 53.5
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 7.6e-81 304.7 266 57.5
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 9.9e-81 304.3 297 54.9
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 3.2e-79 299.3 287 54.7
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 5.5e-79 298.5 271 54.2
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.6e-78 297.0 274 56.6
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 1.0e-77 294.3 212 66.5
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 1.1e-76 290.8 252 57.1
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 1.5e-76 290.4 289 53.6
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 4.8e-75 285.4 273 52.0
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 4.8e-75 285.4 259 57.1
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 6.2e-75 285.0 277 51.6
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.4e-74 283.9 254 57.5
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 4.0e-74 282.3 280 51.8
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 5.3e-74 282.0 255 54.9
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 2.0e-73 280.0 285 53.3
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 1.7e-72 276.9 252 56.3
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 2.2e-72 276.6 277 50.2
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 4.9e-72 275.4 251 55.8
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 6.5e-72 275.0 242 58.3
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 5.7e-68 261.9 305 49.2
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 6.9e-66 255.0 272 48.9
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 2.6e-65 253.1 193 65.3
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 8.5e-64 248.1 252 50.8
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.9e-63 246.9 274 51.1
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 1.2e-62 244.2 350 38.6
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.6e-62 243.8 270 46.3
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.0e-61 241.1 267 48.7
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.5e-60 237.3 270 45.2
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.8e-59 233.0 300 41.3
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.7e-54 216.5 273 45.8
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.7e-54 215.7 219 49.3
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.7e-54 215.7 219 49.3
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.7e-53 211.8 226 50.4
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.3e-52 209.5 219 49.8
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 5.7e-52 208.8 291 38.5
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.3e-51 207.6 219 49.3
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 7.0e-50 201.8 197 56.9
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 2.0e-49 200.3 194 52.6
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 3.0e-45 186.4 250 42.0
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 3.7e-43 179.5 185 52.4
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 5.3e-42 175.6 210 46.2
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 9.1e-42 174.9 124 67.7
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 2.9e-40 169.9 161 59.0
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 5.2e-37 159.1 135 57.0
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 5.2e-37 159.1 276 35.1
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 1.3e-35 154.5 152 57.9
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 2.2e-35 153.7 429 27.7
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 1.4e-34 151.0 161 49.1
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 3.5e-33 146.4 352 31.5
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.2e-30 137.9 294 29.9
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 1.0e-29 134.8 388 26.8
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 4.0e-29 132.9 155 47.1
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 7.5e-28 128.6 74 77.0
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 3.1e-26 123.2 155 43.9
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.0e-21 106.3 72 68.1
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 4.4e-20 102.8 140 47.9
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 9.8e-20 101.7 53 79.2
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 8.3e-19 98.6 165 36.4
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.6e-17 94.4 195 34.4
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.3e-15 86.3 57 61.4
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.0e-13 81.6 48 72.9
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.6e-12 77.0 61 59.0
Haze_02522 Corylus avellana HOM05D004971 ORTHO05D006289 1.5e-07 61.2 89 38.2
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 1.5e-07 61.2 38 63.2
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 1.5e-07 61.2 38 63.2
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 8.0e-06 55.5 38 57.9


User provided reference genes

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