Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 5.8e-69 264.2 145 100.0
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 8.7e-49 197.2 143 71.3
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 2.8e-47 192.2 142 70.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 3.6e-47 191.8 142 73.2
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 6.2e-47 191.0 145 71.7
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 1.8e-46 189.5 142 69.0
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 3.1e-46 188.7 142 71.1
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 4.0e-46 188.3 143 68.5
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 5.2e-46 188.0 143 68.5
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 6.9e-46 187.6 143 67.8
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.0e-45 186.0 143 67.1
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.6e-45 185.7 143 67.8
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.6e-45 185.7 143 66.4
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 2.6e-45 185.7 143 68.5
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 1.7e-44 183.0 143 68.5
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 8.4e-44 180.6 142 68.3
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 1.4e-43 179.9 142 65.5
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 1.9e-43 179.5 142 69.7
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.9e-43 179.5 143 66.4
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 3.2e-43 178.7 142 65.5
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 4.2e-43 178.3 142 66.2
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 5.4e-43 177.9 143 69.2
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 9.3e-43 177.2 142 67.6
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 9.3e-43 177.2 142 66.2
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.2e-42 176.8 142 66.9
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 1.6e-42 176.4 144 71.5
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 3.5e-42 175.3 142 67.6
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 4.6e-42 174.9 142 65.5
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 4.6e-42 174.9 142 64.1
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 4.6e-42 174.9 140 66.4
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 4.6e-42 174.9 140 66.4
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 6.0e-42 174.5 142 62.7
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 1.7e-41 172.9 143 65.0
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.7e-41 172.9 141 65.2
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.7e-41 172.9 141 65.2
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.3e-41 172.6 142 64.8
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 2.3e-41 172.6 141 63.1
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 3.0e-41 172.2 142 65.5
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 3.0e-41 172.2 142 63.4
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 3.0e-41 172.2 142 63.4
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 5.1e-41 171.4 142 62.7
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 5.1e-41 171.4 142 64.1
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 8.7e-41 170.6 143 64.3
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 1.1e-40 170.2 141 65.2
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 1.1e-40 170.2 141 63.1
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 1.5e-40 169.9 143 64.3
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.5e-40 169.9 145 65.5
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.5e-40 169.9 130 71.5
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 9.6e-40 167.2 143 63.6
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 1.3e-39 166.8 142 63.4
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 1.3e-39 166.8 142 63.4
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 1.3e-39 166.8 128 74.2
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 1.3e-39 166.8 141 64.5
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.6e-39 166.4 129 69.8
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.6e-39 166.4 142 63.4
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 2.1e-39 166.0 143 65.0
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 3.6e-39 165.2 142 65.5
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 1.4e-38 163.3 139 64.0
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 6.9e-38 161.0 129 65.9
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 6.9e-38 161.0 130 65.4
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 6.9e-38 161.0 143 59.4
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 1.5e-37 159.8 139 62.6
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 2.6e-37 159.1 134 61.9
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 2.6e-37 159.1 130 64.6
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 3.4e-37 158.7 141 60.3
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 5.8e-37 157.9 141 61.0
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 7.6e-37 157.5 142 60.6
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 7.6e-37 157.5 141 59.6
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 9.9e-37 157.1 141 58.9
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 9.9e-37 157.1 135 63.7
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.3e-36 156.8 133 64.7
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.7e-36 156.4 138 62.3
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 2.2e-36 156.0 139 62.6
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 4.9e-36 154.8 145 59.3
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 4.2e-35 151.8 124 65.3
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 5.4e-35 151.4 129 63.6
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 2.1e-34 149.4 142 56.3
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 1.3e-33 146.7 130 58.5
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 1.8e-33 146.4 125 64.0
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 3.0e-33 145.6 129 62.8
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 8.7e-33 144.1 139 56.8
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 1.5e-32 143.3 120 65.0
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 1.9e-32 142.9 137 56.9
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 3.3e-32 142.1 139 56.1
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 4.8e-31 138.3 121 60.3
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 4.0e-30 135.2 141 53.2
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.5e-29 133.3 133 56.4
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 2.0e-29 132.9 110 64.5
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 2.0e-29 132.9 141 54.6
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.6e-29 132.5 136 58.1
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 2.6e-29 132.5 130 56.9
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 7.6e-29 131.0 136 56.6
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 2.7e-26 122.5 140 50.7
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 3.0e-25 119.0 102 63.7
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 4.3e-24 115.2 137 49.6
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 1.6e-23 113.2 121 53.7
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.6e-21 105.9 142 47.9
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 3.2e-19 99.0 134 43.3
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 2.7e-18 95.9 136 44.9
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 8.2e-15 84.3 132 40.9
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 6.7e-09 64.7 51 66.7
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 3.1e-06 55.8 69 52.2


User provided reference genes

Program Settings