Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1288 Acer truncatum HOM05D000034 ORTHO05D014273 5.1e-51 204.1 105 100.0
Atru.chr3.2332 Acer truncatum HOM05D000034 ORTHO05D000037 2.0e-39 165.6 99 86.9
Atru.chr10.2194 Acer truncatum HOM05D000034 ORTHO05D000037 2.6e-34 148.7 92 83.7
RcHm_v2.0_Chr7g0199291 Rosa chinensis HOM05D000034 ORTHO05D000037 1.2e-28 129.8 96 67.7
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 4.2e-21 104.8 87 56.3
FvH4_3g29911 Fragaria vesca HOM05D000034 ORTHO05D000037 4.2e-21 104.8 103 56.3
FAN12G2727 Fragaria x ananassa HOM05D000034 ORTHO05D014273 1.0e-19 100.1 77 63.6
FvH4_2g13361 Fragaria vesca HOM05D000034 ORTHO05D000037 1.8e-19 99.4 100 56.0
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 3.0e-19 98.6 100 57.0
FvH4_2g04530 Fragaria vesca HOM05D000034 ORTHO05D000037 4.0e-19 98.2 89 61.8
FvH4_2g11121 Fragaria vesca HOM05D000034 ORTHO05D000037 4.0e-19 98.2 89 61.8
FvH4_6g53026 Fragaria vesca HOM05D000034 ORTHO05D014273 4.0e-19 98.2 75 65.3
FvH4_4g20922 Fragaria vesca HOM05D000034 ORTHO05D000037 4.4e-18 94.7 98 54.1
FvH4_5g23912 Fragaria vesca HOM05D000034 ORTHO05D000037 5.7e-18 94.4 98 54.1
FvH4_7g19211 Fragaria vesca HOM05D000034 ORTHO05D000037 1.3e-17 93.2 98 53.1
RcHm_v2.0_Chr6g0292381 Rosa chinensis HOM05D000034 ORTHO05D000037 1.3e-17 93.2 92 56.5
RcHm_v2.0_Chr4g0414051 Rosa chinensis HOM05D000034 ORTHO05D000037 2.8e-17 92.0 99 53.5
CANSAT25G1749 Cannabis sativa HOM05D000034 ORTHO05D000037 1.4e-16 89.7 94 51.1
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 4.1e-16 88.2 94 50.0
Atru.chr3.1645 Acer truncatum HOM05D000034 ORTHO05D014273 1.2e-15 86.7 64 78.1
Atru.chr3.1646 Acer truncatum HOM05D000034 ORTHO05D014273 1.2e-15 86.7 64 78.1
CANSAT56G4166 Cannabis sativa HOM05D000034 ORTHO05D000037 1.6e-15 86.3 94 48.9
MD11G1151600 Malus domestica HOM05D000034 ORTHO05D000037 3.5e-15 85.1 65 58.5
PSO357G0155 Papaver somniferum HOM05D000034 ORTHO05D000037 4.5e-15 84.7 91 51.6
arahy.Tifrunner.gnm1.ann1.Y4Z60F Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-14 82.8 95 52.6
CANSAT11G0430 Cannabis sativa HOM05D000034 ORTHO05D000037 1.7e-14 82.8 89 49.4
RcHm_v2.0_Chr4g0419691 Rosa chinensis HOM05D000034 ORTHO05D014273 2.2e-14 82.4 64 70.3
FvH4_4g07761 Fragaria vesca HOM05D000876 ORTHO05D000285 1.5e-13 79.7 68 58.8
arahy.Tifrunner.gnm1.ann1.TEB0R7 Arachis hypogaea HOM05D000034 ORTHO05D000037 3.2e-13 78.6 94 51.1
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 4.2e-13 78.2 94 52.1
arahy.Tifrunner.gnm1.ann1.JL1WEN Arachis hypogaea HOM05D000034 ORTHO05D000037 4.2e-13 78.2 94 50.0
arahy.Tifrunner.gnm1.ann1.WA83K8 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.2e-13 78.2 94 50.0
RcHm_v2.0_Chr5g0009581 Rosa chinensis HOM05D010466 ORTHO05D013607 4.2e-13 78.2 87 54.0
arahy.Tifrunner.gnm1.ann1.JE1DTX Arachis hypogaea HOM05D000034 ORTHO05D000037 5.5e-13 77.8 94 50.0
Hma1.2p1_1747F.1_g300600 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.5e-13 77.8 92 45.7
FAN03G1391 Fragaria x ananassa HOM05D000876 ORTHO05D014273 1.2e-12 76.6 72 55.6
arahy.Tifrunner.gnm1.ann1.UAQH0I Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-12 75.5 94 50.0
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-12 75.5 71 52.1
Hma1.2p1_0344F.1_g131050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-12 75.5 92 42.4
Hma1.2p1_0344F.1_g131060 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-12 75.5 92 42.4
FAN09G2538 Fragaria x ananassa HOM05D000441 ORTHO05D013607 6.1e-12 74.3 93 49.5
FAN14G4281 Fragaria x ananassa HOM05D000020 ORTHO05D013607 1.0e-11 73.6 81 54.3
FvH4_1g19402 Fragaria vesca HOM05D000167 ORTHO05D014273 3.0e-11 72.0 58 63.8
FAN28G0617 Fragaria x ananassa HOM05D002834 ORTHO05D003029 4.0e-11 71.6 76 56.6
Atru.chr11.924 Acer truncatum HOM05D000034 ORTHO05D000285 8.8e-11 70.5 86 47.7
FAN16G1252 Fragaria x ananassa HOM05D000034 ORTHO05D014273 8.8e-11 70.5 59 57.6
Hma1.2p1_1123F.1_g259380 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.0e-10 69.3 90 42.2
Hma1.2p1_0455F.1_g156310 Hydrangea macrophylla HOM05D001457 ORTHO05D016634 3.4e-10 68.6 91 42.9
RcHm_v2.0_Chr4g0406001 Rosa chinensis HOM05D010466 ORTHO05D013607 1.3e-09 66.6 80 52.5
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 2.8e-09 65.5 90 37.8
Hma1.2p1_0148F.1_g066085 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-09 65.5 64 48.4
AUR62020810 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.7e-09 65.1 97 45.4
Ciclev10003111m.g Citrus clementina HOM05D033375 ORTHO05D000037 3.7e-09 65.1 93 41.9
RcHm_v2.0_Chr2g0085491 Rosa chinensis HOM05D000034 ORTHO05D014273 6.3e-09 64.3 47 74.5
AUR62009858 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.3e-09 63.9 97 44.3
HPP92_002979 Vanilla planifolia HOM05D000034 ORTHO05D000037 8.3e-09 63.9 119 36.1
FAN15G2037 Fragaria x ananassa HOM05D010466 ORTHO05D013607 1.1e-08 63.5 79 49.4
Oeu041652.1 Olea europaea HOM05D000034 ORTHO05D000037 1.4e-08 63.2 89 39.3
arahy.Tifrunner.gnm1.ann1.D4V5SR Arachis hypogaea HOM05D000034 ORTHO05D000037 1.8e-08 62.8 71 47.9
CANSAT01G2537 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 62.8 90 40.0
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 62.8 90 40.0
CANSAT78G0685 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 62.8 90 40.0
CANSAT78G1769 Cannabis sativa HOM05D000034 ORTHO05D000037 1.8e-08 62.8 90 40.0
FAN02G4215 Fragaria x ananassa HOM05D000034 ORTHO05D014273 1.8e-08 62.8 49 61.2
AUR62013970 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.4e-08 62.4 97 41.2
AUR62043022 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.4e-08 62.4 97 41.2
AUR62020230 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.1e-08 62.0 97 44.3
FAN26G1759 Fragaria x ananassa HOM05D010466 ORTHO05D014273 3.1e-08 62.0 71 53.5
FAN22G0927 Fragaria x ananassa HOM05D004779 ORTHO05D013607 4.1e-08 61.6 78 52.6
arahy.Tifrunner.gnm1.ann1.05F1M4 Arachis hypogaea HOM05D000034 ORTHO05D000037 7.0e-08 60.8 54 51.9
Medtr8g073195 Medicago truncatula HOM05D000034 ORTHO05D016667 7.0e-08 60.8 90 34.4
arahy.Tifrunner.gnm1.ann1.1TP3RE Arachis hypogaea HOM05D000034 ORTHO05D000037 9.2e-08 60.5 106 45.3
Hma1.2p1_0148F.1_g066090 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.2e-08 60.5 36 58.3
Atru.chr8.821 Acer truncatum HOM05D000034 ORTHO05D000037 1.2e-07 60.1 65 41.5
TPR.G22227 Trifolium pratense HOM05D000034 ORTHO05D000037 1.2e-07 60.1 97 36.1
HanXRQChr10g0313541 Helianthus annuus HOM05D000034 ORTHO05D000037 1.6e-07 59.7 100 39.0
Oeu022434.1 Olea europaea HOM05D008790 ORTHO05D000037 1.6e-07 59.7 74 40.5
Oeu043894.1 Olea europaea HOM05D000034 ORTHO05D000037 1.6e-07 59.7 96 37.5
Psat5g170880 Pisum sativum HOM05D000034 ORTHO05D000037 1.6e-07 59.7 92 35.9
arahy.Tifrunner.gnm1.ann1.0FUF30 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 59.3 91 36.3
arahy.Tifrunner.gnm1.ann1.9LP8WG Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 59.3 91 37.4
arahy.Tifrunner.gnm1.ann1.B5SYFK Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 59.3 91 36.3
arahy.Tifrunner.gnm1.ann1.HLEK2P Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-07 59.3 91 36.3
TPR.G25730 Trifolium pratense HOM05D000034 ORTHO05D000037 2.0e-07 59.3 58 46.6
TPR.G30701 Trifolium pratense HOM05D000034 ORTHO05D000037 2.0e-07 59.3 52 51.9
QL08p042355 Quercus lobata HOM05D000034 ORTHO05D000037 3.5e-07 58.5 89 38.2
AUR62036686 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.5e-07 58.2 97 40.2
HanXRQChr03g0088121 Helianthus annuus HOM05D000034 ORTHO05D000037 4.5e-07 58.2 107 35.5
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 4.5e-07 58.2 82 36.6
Oeu000525.1 Olea europaea HOM05D000034 ORTHO05D000037 4.5e-07 58.2 99 38.4
TPR.G22995 Trifolium pratense HOM05D000034 ORTHO05D000037 4.5e-07 58.2 57 47.4
arahy.Tifrunner.gnm1.ann1.FATU7S Arachis hypogaea HOM05D000034 ORTHO05D000037 5.9e-07 57.8 91 36.3
Oeu063461.1 Olea europaea HOM05D000034 ORTHO05D000037 5.9e-07 57.8 80 36.2
TWI56G1270 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.9e-07 57.8 91 44.0
RcHm_v2.0_Chr2g0145791 Rosa chinensis HOM05D000034 ORTHO05D014273 7.7e-07 57.4 39 76.9
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.7e-07 57.4 91 42.9
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.7e-07 57.4 91 42.9
Atru.chr4.703 Acer truncatum HOM05D000034 ORTHO05D000037 1.0e-06 57.0 88 35.2
Oeu043539.1 Olea europaea HOM05D000034 ORTHO05D000037 1.0e-06 57.0 74 39.2
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.0e-06 57.0 91 39.6
FvH4_5g30881 Fragaria vesca HOM05D009570 ORTHO05D009451 1.3e-06 56.6 83 43.4
TWI23G0109 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.3e-06 56.6 94 40.4
arahy.Tifrunner.gnm1.ann1.H3BLYN Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 56.2 58 44.8
arahy.Tifrunner.gnm1.ann1.MKXD2W Arachis hypogaea HOM05D000034 ORTHO05D000037 2.3e-06 55.8 61 41.0
HanXRQChr07g0199291 Helianthus annuus HOM05D000034 ORTHO05D000037 2.3e-06 55.8 110 35.5
TPR.G34480 Trifolium pratense HOM05D000034 ORTHO05D000037 2.3e-06 55.8 100 39.0
TWI38G1321 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.3e-06 55.8 98 38.8
BcaC05g25828 Brassica carinata HOM05D000034 ORTHO05D000037 2.9e-06 55.5 90 40.0
Oeu044176.1 Olea europaea HOM05D000034 ORTHO05D000037 2.9e-06 55.5 90 33.3
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.9e-06 55.5 93 35.5
Solyc12g150115.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.9e-06 55.5 93 35.5
TPR.G19328 Trifolium pratense HOM05D000034 ORTHO05D000037 2.9e-06 55.5 94 34.0
TWI15G1167 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.9e-06 55.5 57 50.9
arahy.Tifrunner.gnm1.ann1.VJTY5B Arachis hypogaea HOM05D000034 ORTHO05D000037 3.8e-06 55.1 91 35.2
CAN.G134.83 Capsicum annuum HOM05D001789 ORTHO05D001755 3.8e-06 55.1 51 47.1
Sopen06g005920 Solanum pennellii HOM05D000034 ORTHO05D000037 3.8e-06 55.1 93 35.5
Atru.chr13.1247 Acer truncatum HOM05D000034 ORTHO05D000037 5.0e-06 54.7 88 36.4
arahy.Tifrunner.gnm1.ann1.WG15T1 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.0e-06 54.7 90 34.4
EL10Ac7g18212 Beta vulgaris HOM05D000034 ORTHO05D000037 5.0e-06 54.7 90 36.7
ECA233G0273 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.0e-06 54.7 96 35.4
Oeu002825.1 Olea europaea HOM05D000034 ORTHO05D000037 5.0e-06 54.7 96 35.4
Oeu046621.1 Olea europaea HOM05D000034 ORTHO05D000037 5.0e-06 54.7 92 35.9
THA.LOC109117196 Tarenaya hassleriana HOM05D000034 ORTHO05D000037 5.0e-06 54.7 90 34.4
TWI09G0723 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.0e-06 54.7 92 41.3
TWI75G1861 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.0e-06 54.7 90 38.9
arahy.Tifrunner.gnm1.ann1.D49VG9 Arachis hypogaea HOM05D000034 ORTHO05D000037 6.6e-06 54.3 91 36.3
Lj6g0020842 Lotus japonicus HOM05D000034 ORTHO05D000037 6.6e-06 54.3 94 35.1
arahy.Tifrunner.gnm1.ann1.MFJS9C Arachis hypogaea HOM05D000034 ORTHO05D000037 8.6e-06 53.9 63 39.7
EL10Ac7g16586 Beta vulgaris HOM05D000034 ORTHO05D000037 8.6e-06 53.9 93 36.6
CANSAT80G1843 Cannabis sativa HOM05D000034 ORTHO05D000037 8.6e-06 53.9 85 40.0
ECA234G4025 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.6e-06 53.9 97 33.0
Lj2g0028060 Lotus japonicus HOM05D000034 ORTHO05D000037 8.6e-06 53.9 87 42.5
Lj3g0017061 Lotus japonicus HOM05D000034 ORTHO05D000037 8.6e-06 53.9 87 42.5
LjContig00272g0009285 Lotus japonicus HOM05D000034 ORTHO05D000037 8.6e-06 53.9 87 42.5
Oeu007209.1 Olea europaea HOM05D000034 ORTHO05D000037 8.6e-06 53.9 91 33.0
Oeu033241.1 Olea europaea HOM05D000034 ORTHO05D000037 8.6e-06 53.9 92 34.8
RcHm_v2.0_Chr7g0231491 Rosa chinensis HOM05D010466 ORTHO05D013607 8.6e-06 53.9 80 47.5


User provided reference genes

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