Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1142 Acer truncatum HOM05D002758 ORTHO05D002885 1.2e-44 183.0 106 100.0
Manes.06G058000 Manihot esculenta HOM05D002758 ORTHO05D002885 4.1e-16 88.2 91 62.6
Potri.018G131100 Populus trichocarpa HOM05D002758 ORTHO05D002885 4.1e-16 88.2 93 62.4
Potri.006G069100 Populus trichocarpa HOM05D002758 ORTHO05D002885 1.6e-15 86.3 95 65.3
CANSAT11G2365 Cannabis sativa HOM05D002758 ORTHO05D002885 6.0e-15 84.3 91 58.2
Manes.14G132900 Manihot esculenta HOM05D002758 ORTHO05D002885 6.0e-15 84.3 91 69.2
FAN28G2446 Fragaria x ananassa HOM05D000315 ORTHO05D001379 1.3e-14 83.2 93 59.1
MD15G1172200 Malus domestica HOM05D002758 ORTHO05D002885 1.3e-14 83.2 93 63.4
FAN23G2585 Fragaria x ananassa HOM05D002758 ORTHO05D002885 2.3e-14 82.4 93 59.1
FAN26G2290 Fragaria x ananassa HOM05D002758 ORTHO05D002885 2.3e-14 82.4 93 59.1
Gohir.A05G016000 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-14 82.4 92 60.9
Gohir.D05G017100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-14 82.4 92 60.9
Gorai.009G017300 Gossypium raimondii HOM05D002758 ORTHO05D002885 2.3e-14 82.4 92 60.9
Prupe.7G243900 Prunus persica HOM05D002758 ORTHO05D002885 2.3e-14 82.4 91 58.2
Sabra06G0051500 Salix brachista HOM05D002758 ORTHO05D002885 2.3e-14 82.4 94 61.7
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 3.9e-14 81.6 91 57.1
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 5.1e-14 81.3 91 61.5
FAN19G2709 Fragaria x ananassa HOM05D002758 ORTHO05D002885 6.6e-14 80.9 93 58.1
QL02p088621 Quercus lobata HOM05D002758 ORTHO05D002885 6.6e-14 80.9 92 63.0
Duzib168G0478 Durio zibethinus HOM05D002758 ORTHO05D002885 8.6e-14 80.5 91 70.3
FvH4_1g03160 Fragaria vesca HOM05D002758 ORTHO05D002885 1.1e-13 80.1 93 58.1
RcHm_v2.0_Chr2g0088291 Rosa chinensis HOM05D002758 ORTHO05D002885 1.1e-13 80.1 93 58.1
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 1.9e-13 79.3 91 58.2
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 3.3e-13 78.6 91 53.8
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea HOM05D002758 ORTHO05D002885 4.3e-13 78.2 106 52.8
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea HOM05D002758 ORTHO05D002885 4.3e-13 78.2 106 52.8
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 5.6e-13 77.8 91 57.1
Oeu058050.1 Olea europaea HOM05D002758 ORTHO05D002885 5.6e-13 77.8 91 65.9
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 7.3e-13 77.4 92 54.3
Glyma.13G166500 Glycine max HOM05D002758 ORTHO05D002885 7.3e-13 77.4 94 64.9
MD02G1030600 Malus domestica HOM05D002758 ORTHO05D002885 7.3e-13 77.4 93 60.2
Rhsim01G0069000 Rhododendron simsii HOM05D002758 ORTHO05D002885 1.2e-12 76.6 91 58.2
VMungo1215G1272 Vigna mungo HOM05D002758 ORTHO05D002885 2.1e-12 75.9 91 54.9
Ciclev10009903m.g Citrus clementina HOM05D002758 ORTHO05D002885 3.6e-12 75.1 93 59.1
Glyma.17G114300 Glycine max HOM05D002758 ORTHO05D002885 3.6e-12 75.1 94 55.3
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 3.6e-12 75.1 92 60.9
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 3.6e-12 75.1 92 57.6
CiPaw.03G244800 Carya illinoinensis HOM05D002758 ORTHO05D002885 6.2e-12 74.3 93 61.3
Oeu034104.1 Olea europaea HOM05D002758 ORTHO05D002885 6.2e-12 74.3 91 59.3
Actinidia21981 Actinidia chinensis HOM05D002758 ORTHO05D002885 1.1e-11 73.6 92 59.8
PGR142G4319 Punica granatum HOM05D002758 ORTHO05D002885 1.1e-11 73.6 108 61.1
Ca_21675_v3 Cicer arietinum L. HOM05D002758 ORTHO05D002885 1.4e-11 73.2 92 54.3
Phvul.003G165200 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 1.4e-11 73.2 91 52.7
Actinidia40476 Actinidia chinensis HOM05D002758 ORTHO05D002885 2.3e-11 72.4 101 52.5
DCAR_020919 Daucus carota HOM05D002758 ORTHO05D002885 2.3e-11 72.4 92 59.8
Gohir.A07G036200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-11 72.4 87 58.6
Gohir.D07G040200 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.3e-11 72.4 87 64.4
Gorai.001G042500 Gossypium raimondii HOM05D002758 ORTHO05D002885 3.1e-11 72.0 87 60.9
Lalb_Chr07g0178991 Lupinus albus HOM05D002758 ORTHO05D002885 4.0e-11 71.6 105 48.6
TPR.G26478 Trifolium pratense HOM05D002758 ORTHO05D002885 5.2e-11 71.2 94 57.4
Cpa.g.sc46.5 Carica papaya HOM05D002758 ORTHO05D002885 6.8e-11 70.9 119 46.2
vmacro20564 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 8.9e-11 70.5 91 57.1
Glyma.04G147200 Glycine max HOM05D002758 ORTHO05D002885 1.2e-10 70.1 91 52.7
Lsat_1_v5_gn_5_95300 Lactuca sativa HOM05D002758 ORTHO05D002885 1.2e-10 70.1 95 53.7
Medtr4g114600 Medicago truncatula HOM05D002758 ORTHO05D002885 1.2e-10 70.1 94 52.1
Haze_25567 Corylus avellana HOM05D002758 ORTHO05D002885 1.5e-10 69.7 91 58.2
ECA234G1831 Erigeron canadensis HOM05D002758 ORTHO05D002885 1.5e-10 69.7 93 52.7
CSS0022572 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 2.0e-10 69.3 90 57.8
Psat4g039800 Pisum sativum HOM05D002758 ORTHO05D002885 2.0e-10 69.3 93 60.2
TWI32G0299 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 4.4e-10 68.2 84 58.3
Dinv36518 Davidia involucrata HOM05D002758 ORTHO05D002885 5.8e-10 67.8 91 60.4
Nitab4.5_0000028g0360 Nicotiana tabacum HOM05D002758 ORTHO05D002885 5.8e-10 67.8 99 50.5
ClCG06G011200 Citrullus lanatus HOM05D002758 ORTHO05D002885 7.6e-10 67.4 92 52.2
Lj4g0007884 Lotus japonicus HOM05D002758 ORTHO05D002885 1.7e-09 66.2 91 57.1
COL.COLO4_35114 Corchorus olitorius HOM05D002758 ORTHO05D002885 2.2e-09 65.9 91 53.8
Eucgr.C01181 Eucalyptus grandis HOM05D002758 ORTHO05D002885 2.9e-09 65.5 95 50.5
Peaxi162Scf00046g00524 Petunia axillaris HOM05D002758 ORTHO05D002885 2.9e-09 65.5 96 56.2
Cfa003385 Carpinus fangiana HOM05D002758 ORTHO05D002885 6.4e-09 64.3 91 50.5
DCAR_014886 Daucus carota HOM05D002758 ORTHO05D002885 6.4e-09 64.3 93 51.6
HanXRQChr10g0315561 Helianthus annuus HOM05D002758 ORTHO05D002885 6.4e-09 64.3 93 50.5
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 6.4e-09 64.3 93 48.4
EL10Ac8g18667 Beta vulgaris HOM05D002758 ORTHO05D002885 8.4e-09 63.9 93 50.5
SalBow1G1971 Salvia bowleyana HOM05D002758 ORTHO05D002885 8.4e-09 63.9 95 52.6
CsaV3_1G030210 Cucumis sativus L. HOM05D002758 ORTHO05D002885 1.1e-08 63.5 102 54.9
Hund26508 Selenicereus undatus HOM05D002758 ORTHO05D002885 1.1e-08 63.5 92 54.3
TWI63G1461 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 1.1e-08 63.5 83 63.9
MELO3C010338.2 Cucumis melo HOM05D002758 ORTHO05D002885 1.4e-08 63.2 102 54.9
Aqoxy7G02215 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 2.4e-08 62.4 91 48.4
Sed0025517 Sechium edule HOM05D002758 ORTHO05D002885 2.4e-08 62.4 94 58.5
GSVIVG01015544001 Vitis vinifera HOM05D002758 ORTHO05D002885 3.2e-08 62.0 99 62.6
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 4.1e-08 61.6 92 46.7
Sabra18G0111200 Salix brachista HOM05D002758 ORTHO05D005776 4.1e-08 61.6 61 68.9
MSTRG.10674 Avicennia marina HOM05D002758 ORTHO05D002885 5.4e-08 61.2 104 53.8
HanXRQChr12g0356261 Helianthus annuus HOM05D002758 ORTHO05D002885 7.1e-08 60.8 92 48.9
Nitab4.5_0005728g0010 Nicotiana tabacum HOM05D002758 ORTHO05D002885 7.1e-08 60.8 92 48.9
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 9.2e-08 60.5 88 50.0
Sed0027515 Sechium edule HOM05D002758 ORTHO05D002885 9.2e-08 60.5 97 48.5
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 9.2e-08 60.5 76 52.6
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 1.2e-07 60.1 92 42.4
Solyc07g008280.4 Solanum lycopersicum HOM05D002758 ORTHO05D002885 1.6e-07 59.7 94 50.0
Sopen07g004170 Solanum pennellii HOM05D002758 ORTHO05D002885 1.6e-07 59.7 94 50.0
CiPaw.04G171600 Carya illinoinensis HOM05D002758 ORTHO05D002885 2.1e-07 59.3 78 55.1
Prupe.3G084900 Prunus persica HOM05D002758 ORTHO05D002885 2.1e-07 59.3 89 46.1
Lsat_1_v5_gn_7_45161 Lactuca sativa HOM05D002758 ORTHO05D002885 2.7e-07 58.9 96 45.8
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 2.7e-07 58.9 88 44.3
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 4.6e-07 58.2 92 51.1
CAN.G403.8 Capsicum annuum HOM05D002758 ORTHO05D002885 4.6e-07 58.2 94 48.9
Cc06_g08410 Coffea canephora HOM05D002758 ORTHO05D002885 4.6e-07 58.2 93 46.2
Lsat_1_v5_gn_8_58521 Lactuca sativa HOM05D002758 ORTHO05D002885 6.0e-07 57.8 93 51.6
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 6.0e-07 57.8 85 45.9
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 7.8e-07 57.4 92 48.9
PGSC0003DMG400019894 Solanum tuberosum HOM05D002758 ORTHO05D002885 7.8e-07 57.4 94 53.2
CiPaw.02G156300 Carya illinoinensis HOM05D002758 ORTHO05D002885 1.0e-06 57.0 82 43.9
Migut.K00449 Erythranthe guttata HOM05D002758 ORTHO05D002885 1.3e-06 56.6 102 53.9
AUR62011138 Chenopodium quinoa HOM05D002758 ORTHO05D002885 1.7e-06 56.2 91 49.5
Nitab4.5_0001764g0140 Nicotiana tabacum HOM05D002758 ORTHO05D002885 3.0e-06 55.5 92 45.7
HanXRQChr04g0096561 Helianthus annuus HOM05D002758 ORTHO05D002885 3.9e-06 55.1 91 46.2
Nn2g12041 Nelumbo nucifera HOM05D002758 ORTHO05D002885 3.9e-06 55.1 59 62.7
Sp1g39120 Schrenkiella parvula HOM05D002758 ORTHO05D002885 3.9e-06 55.1 91 49.5
Peaxi162Scf00332g00756 Petunia axillaris HOM05D002758 ORTHO05D002885 5.1e-06 54.7 91 41.8
Potri.001G192800 Populus trichocarpa HOM05D002758 ORTHO05D002885 5.1e-06 54.7 91 40.7
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 6.6e-06 54.3 92 45.7
C06p14110 Brassica napus HOM05D002758 ORTHO05D002885 6.6e-06 54.3 91 49.5
BolC6t36589H Brassica oleracea HOM05D002758 ORTHO05D002885 6.6e-06 54.3 91 49.5
BraA05t20788Z Brassica rapa HOM05D002758 ORTHO05D002885 6.6e-06 54.3 91 49.5
CARHR042690 Cardamine hirsuta HOM05D002758 ORTHO05D002885 6.6e-06 54.3 86 45.3
BcaC08g44003 Brassica carinata HOM05D002758 ORTHO05D002885 8.6e-06 53.9 91 39.6


User provided reference genes

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