Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 2.4e-114 415.6 226 100.0
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 7.9e-73 277.7 243 69.5
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.3e-71 272.3 240 67.9
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.3e-71 271.9 239 68.6
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 4.8e-70 268.5 235 66.4
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.8e-69 266.5 240 68.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.4e-69 266.2 240 67.5
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.4e-69 266.2 236 68.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.0e-69 265.4 239 67.4
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 4.0e-69 265.4 242 67.4
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.5e-68 263.5 230 65.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 4.5e-68 261.9 241 67.2
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 4.5e-68 261.9 257 63.4
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 5.8e-68 261.5 238 65.5
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 5.8e-68 261.5 239 66.9
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 9.9e-68 260.8 239 65.3
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 9.9e-68 260.8 232 65.1
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.9e-67 259.2 239 66.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.9e-67 258.5 237 65.0
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 8.4e-67 257.7 242 64.0
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 4.2e-66 255.4 238 65.5
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 5.5e-66 255.0 236 65.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 7.1e-66 254.6 234 66.2
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 9.3e-66 254.2 226 67.3
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.2e-65 253.8 243 62.6
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.7e-65 252.7 239 62.8
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 6.0e-65 251.5 234 63.7
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 7.9e-65 251.1 236 64.8
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.0e-64 250.8 227 66.1
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.8e-64 250.0 228 66.7
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 3.9e-64 248.8 227 65.6
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.1e-64 248.4 240 64.6
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 6.7e-64 248.1 229 64.6
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.9e-63 246.5 229 65.9
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.9e-63 246.5 232 64.2
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.9e-63 246.5 232 64.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.5e-63 246.1 243 63.0
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 5.6e-63 245.0 235 63.4
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 5.6e-63 245.0 235 61.3
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 7.4e-63 244.6 238 63.0
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 9.6e-63 244.2 221 64.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.3e-62 243.8 234 64.1
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.6e-62 243.4 233 64.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.1e-62 243.0 232 64.2
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.8e-62 242.7 240 61.7
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 4.8e-62 241.9 217 64.5
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 6.2e-62 241.5 238 62.2
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.1e-61 240.7 226 62.8
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.1e-61 240.7 240 61.7
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.8e-61 240.0 236 62.3
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.8e-61 240.0 236 63.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.1e-61 239.2 227 64.3
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 5.3e-61 238.4 240 61.2
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 5.3e-61 238.4 226 63.7
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 2.6e-60 236.1 233 63.5
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 3.4e-60 235.7 226 63.3
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 4.5e-60 235.3 227 63.4
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.0e-59 234.2 225 63.1
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 3.8e-59 232.3 226 60.2
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 4.9e-59 231.9 235 62.1
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 9.3e-58 227.6 222 60.8
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.6e-57 226.9 222 61.3
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 2.1e-57 226.5 222 60.4
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 2.1e-57 226.5 227 61.2
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 4.6e-57 225.3 222 59.9
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 4.6e-57 225.3 237 60.3
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.0e-56 224.2 221 60.6
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.0e-56 224.2 232 62.1
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 5.1e-56 221.9 222 60.8
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 8.7e-56 221.1 229 61.6
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.1e-55 220.7 222 61.7
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.5e-55 220.3 228 57.9
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 5.7e-55 218.4 226 57.5
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.4e-55 218.0 224 59.4
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.4e-55 218.0 224 59.8
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.3e-54 217.2 224 59.4
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.1e-54 216.5 184 64.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.8e-54 216.1 205 62.9
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.7e-54 215.7 223 59.2
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 3.7e-54 215.7 239 57.3
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.7e-54 215.7 255 56.9
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 4.8e-54 215.3 222 59.5
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.8e-54 215.3 175 68.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.3e-54 214.9 224 58.9
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 1.4e-53 213.8 221 59.3
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.4e-53 213.8 173 67.6
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.4e-53 213.8 235 57.4
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.1e-53 212.2 147 75.5
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 5.3e-53 211.8 238 58.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 5.3e-53 211.8 235 57.0
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 6.9e-53 211.5 230 57.0
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 5.8e-52 208.4 134 79.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 1.0e-51 207.6 230 58.7
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 8.4e-51 204.5 195 60.0
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.9e-50 203.4 222 57.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 7.2e-50 201.4 268 50.4
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.2e-49 200.7 248 52.0
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 2.1e-49 199.9 243 51.9
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.5e-49 199.1 147 71.4
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.0e-48 197.6 145 71.0
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.0e-48 197.6 145 71.0
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 2.5e-47 193.0 230 55.2
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.5e-47 193.0 234 53.8
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.4e-45 186.4 173 57.2
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.4e-44 182.6 203 61.1
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.1e-42 177.6 145 63.4
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.9e-42 176.8 175 58.3
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 9.4e-42 174.5 170 62.9
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.4e-40 170.6 178 61.2
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.8e-38 162.2 200 53.5
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.4e-37 160.6 197 56.3
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-36 156.8 140 64.3
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 7.7e-36 154.8 169 57.4
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 5.0e-35 152.1 128 64.8
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.2e-33 147.5 128 62.5
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.1e-29 134.4 144 50.0
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 5.3e-29 132.1 145 47.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.9e-27 126.3 144 47.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.0e-24 116.3 222 37.8
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.4e-21 107.5 104 52.9
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.7e-19 100.5 75 68.0
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.8e-16 90.5 106 46.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.6e-15 86.7 105 45.7
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-11 73.6 116 47.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 6.1e-09 65.5 110 44.5


User provided reference genes

Program Settings