Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 8.5e-182 640.2 319 100.0
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 2.7e-127 459.1 323 73.7
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 2.8e-116 422.5 319 67.4
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 3.6e-116 422.2 323 66.3
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.5e-114 416.8 319 65.2
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 2.0e-114 416.4 319 65.2
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 2.2e-113 412.9 319 65.2
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 4.9e-113 411.8 323 64.4
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.1e-112 410.6 323 65.9
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 2.7e-111 406.0 319 65.8
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 4.6e-111 405.2 323 63.8
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 1.3e-110 403.7 323 61.3
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 2.3e-110 402.9 319 65.2
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 5.1e-110 401.7 366 59.0
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.9e-109 399.8 323 62.2
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 9.6e-109 397.5 319 63.6
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 6.2e-108 394.8 322 64.6
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 6.9e-107 391.3 323 62.8
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.0e-106 389.8 323 63.5
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.6e-106 389.4 323 63.8
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 5.8e-106 388.3 319 63.0
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 3.8e-105 385.6 319 64.9
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 8.4e-105 384.4 323 61.9
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.6e-103 380.2 323 59.4
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.0e-102 377.5 321 61.4
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 1.0e-102 377.5 319 60.5
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.8e-102 376.7 321 62.0
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 6.7e-102 374.8 322 60.9
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 8.7e-102 374.4 320 59.4
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 4.3e-101 372.1 321 59.8
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 4.3e-101 372.1 319 61.1
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 5.6e-101 371.7 322 59.0
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 7.4e-101 371.3 323 60.1
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 9.6e-101 370.9 319 58.9
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 9.6e-101 370.9 323 58.8
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.3e-100 370.5 319 61.4
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.6e-100 370.2 323 58.2
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.6e-100 370.2 322 59.9
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 4.8e-100 368.6 323 58.2
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 4.8e-100 368.6 323 58.2
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 6.2e-100 368.2 320 58.4
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 5.3e-99 365.2 323 58.8
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 1.0e-97 360.9 326 60.4
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.3e-97 360.5 323 57.9
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.3e-97 360.5 323 60.7
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 4.9e-97 358.6 324 56.5
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 1.4e-96 357.1 323 58.5
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 4.2e-96 355.5 323 59.1
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 3.5e-95 352.4 319 60.5
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 4.6e-95 352.1 319 59.2
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.0e-95 351.7 394 51.3
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 3.0e-94 349.4 319 58.9
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 3.0e-94 349.4 320 57.8
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 1.6e-92 343.6 325 56.6
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 2.1e-92 343.2 321 56.7
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 1.8e-91 340.1 319 54.9
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 3.1e-91 339.3 320 55.3
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 5.3e-91 338.6 319 54.2
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.4e-90 335.9 438 45.7
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 4.5e-90 335.5 319 54.9
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 1.7e-89 333.6 321 54.5
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 3.8e-89 332.4 319 54.5
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 6.5e-89 331.6 319 53.9
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 1.1e-88 330.9 319 53.9
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 2.5e-88 329.7 320 55.3
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 4.2e-88 328.9 320 53.4
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.7e-87 326.2 320 53.4
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 7.9e-87 324.7 322 53.4
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.3e-86 323.2 334 52.4
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 3.0e-86 322.8 240 66.2
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 1.5e-85 320.5 322 53.1
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 2.5e-85 319.7 323 51.7
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 4.3e-85 318.9 320 52.2
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 5.7e-85 318.5 320 51.6
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 6.3e-84 315.1 334 50.6
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 1.8e-83 313.5 319 52.0
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.4e-83 313.2 319 52.4
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 3.1e-83 312.8 322 51.6
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 3.1e-83 312.8 320 53.1
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.1e-83 312.8 323 50.8
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 5.3e-83 312.0 319 51.7
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 3.4e-82 309.3 321 51.4
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 4.5e-82 308.9 320 50.9
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 1.1e-80 304.3 320 51.2
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.5e-80 303.1 319 51.4
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 9.4e-80 301.2 319 52.4
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 1.4e-78 297.4 325 51.4
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 2.0e-77 293.5 323 49.8
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 2.5e-77 293.1 229 64.6
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 5.7e-77 292.0 263 60.5
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 4.8e-76 288.9 344 47.4
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 1.4e-75 287.3 278 58.6
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 1.2e-74 284.3 327 49.8
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.2e-74 284.3 259 61.0
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.0e-73 281.2 251 57.8
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.0e-73 281.2 279 52.7
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 3.8e-73 279.3 290 52.8
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 2.5e-72 276.6 330 46.4
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 7.2e-72 275.0 277 55.6
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.3e-70 270.0 329 47.7
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 2.0e-69 266.9 295 52.5
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 5.7e-69 265.4 273 49.1
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.3e-68 264.2 392 42.1
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 5.3e-67 258.8 319 46.4
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 1.0e-65 254.6 237 54.0
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 6.5e-65 251.9 319 46.1
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 4.2e-64 249.2 299 46.2
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 5.0e-57 225.7 314 41.7
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 6.1e-55 218.8 280 46.4
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 6.1e-55 218.8 169 60.9
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 2.3e-54 216.9 332 38.6
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.7e-52 210.7 231 48.5
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 1.1e-51 208.0 340 38.5
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 1.4e-51 207.6 320 39.4
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 2.4e-51 206.8 341 38.7
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 2.0e-50 203.8 198 53.0
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 6.5e-49 198.7 264 45.5
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 5.5e-48 195.7 329 36.2
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.3e-44 184.5 334 37.7
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.8e-43 180.6 338 36.4
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 6.6e-41 172.2 319 36.1
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 3.6e-39 166.4 243 44.0
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 6.0e-18 95.9 55 78.2
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 4.1e-11 73.2 66 57.6
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 5.4e-11 72.8 49 71.4
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 7.1e-11 72.4 47 70.2


User provided reference genes

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