Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 3.4e-253 877.9 445 100.0
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 3.7e-151 538.9 470 61.5
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 3.9e-148 528.9 504 59.1
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.3e-147 525.8 456 61.6
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 6.1e-146 521.5 465 57.8
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 1.4e-145 520.4 468 62.0
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 1.4e-145 520.4 476 60.5
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 2.3e-145 519.6 467 61.0
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 2.6e-144 516.2 455 61.3
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 4.4e-144 515.4 505 56.8
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 4.4e-144 515.4 503 55.9
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 1.4e-142 510.4 500 56.0
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 2.4e-142 509.6 501 56.3
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 5.4e-142 508.4 457 59.3
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 5.4e-142 508.4 463 60.3
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 9.2e-142 507.7 504 56.0
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 2.7e-141 506.1 455 60.0
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 6.0e-141 505.0 505 55.0
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 1.7e-140 503.4 456 59.4
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.3e-140 503.1 469 57.4
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 3.9e-140 502.3 504 56.5
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 8.6e-140 501.1 468 56.8
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 8.6e-140 501.1 469 57.1
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.5e-139 500.4 469 56.9
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 1.4e-137 493.8 462 59.3
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.4e-137 493.8 487 59.1
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 3.1e-137 492.7 461 58.1
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 5.2e-137 491.9 464 57.8
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 1.5e-136 490.3 465 60.6
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 2.0e-136 490.0 489 57.5
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 3.7e-135 485.7 498 55.0
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.1e-134 484.2 465 58.9
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 2.4e-134 483.0 460 58.0
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 7.0e-134 481.5 500 55.8
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 2.7e-133 479.6 383 65.0
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 7.8e-133 478.0 482 54.6
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 1.3e-132 477.2 499 54.3
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 3.0e-132 476.1 479 55.7
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 2.5e-131 473.0 451 57.4
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 2.5e-131 473.0 462 55.6
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 9.5e-131 471.1 460 59.1
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 2.1e-130 469.9 458 58.3
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 2.8e-130 469.5 459 58.6
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 6.2e-130 468.4 460 59.1
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 1.4e-129 467.2 452 57.1
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 1.8e-129 466.8 459 56.0
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 4.0e-129 465.7 452 56.6
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 5.2e-129 465.3 453 57.8
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 1.2e-128 464.2 451 56.3
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 2.0e-128 463.4 455 55.6
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 2.6e-128 463.0 462 53.9
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 4.4e-128 462.2 458 55.9
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 2.2e-127 459.9 452 56.2
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 1.9e-126 456.8 451 56.3
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 1.9e-126 456.8 462 54.3
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 7.1e-126 454.9 453 56.3
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 9.2e-126 454.5 452 55.8
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 1.2e-125 454.1 470 53.6
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 2.1e-125 453.4 451 55.4
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 4.6e-125 452.2 460 53.9
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 6.6e-124 448.4 454 54.8
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.5e-123 447.2 451 55.9
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 4.7e-122 442.2 463 54.0
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 1.8e-121 440.3 471 53.3
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 6.8e-121 438.3 464 53.2
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 2.0e-120 436.8 465 53.5
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 2.6e-120 436.4 471 52.4
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 6.4e-119 431.8 407 58.2
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.1e-118 431.0 456 51.5
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 1.4e-118 430.6 423 56.0
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 6.0e-117 425.2 469 52.5
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 1.1e-115 421.0 456 52.4
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 5.6e-115 418.7 532 47.0
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 6.2e-114 415.2 458 51.7
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 6.2e-114 415.2 472 48.1
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 8.1e-114 414.8 464 50.4
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 3.1e-113 412.9 474 49.2
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 3.8e-111 406.0 473 47.6
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 4.9e-111 405.6 460 51.3
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 6.0e-109 398.7 469 51.2
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 1.3e-108 397.5 483 46.8
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 1.7e-103 380.6 445 52.6
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.1e-102 377.9 412 49.0
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 1.4e-97 360.9 394 53.6
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.3e-95 354.4 338 57.7
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 5.5e-94 349.0 446 48.0
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 6.0e-93 345.5 450 46.4
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.9e-91 340.5 331 55.9
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.3e-90 337.8 376 50.5
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 3.4e-88 329.7 397 47.6
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 1.4e-86 324.3 445 45.2
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 4.1e-81 306.2 445 44.9
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 5.3e-81 305.8 458 39.1
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 1.5e-72 277.7 202 69.8
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.5e-72 277.7 451 41.0
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 1.4e-70 271.2 196 70.4
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.1e-67 261.5 219 61.6
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 6.3e-66 255.8 208 65.9
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 7.7e-64 248.8 244 55.3
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.0e-63 248.4 287 47.4
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 5.5e-62 242.7 326 45.4
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 1.3e-58 231.5 506 34.2
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 7.2e-54 215.7 538 31.4
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 6.1e-53 212.6 217 55.8
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 2.6e-51 207.2 415 34.2
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 1.4e-49 201.4 124 80.6
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 2.5e-46 190.7 269 39.4
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 2.5e-46 190.7 514 29.4
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.2e-42 177.6 124 74.2
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 1.4e-33 148.3 171 44.4
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 9.5e-30 135.6 114 61.4
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 1.6e-29 134.8 143 49.0
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-25 122.1 72 83.3
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 4.6e-24 116.7 69 84.1
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 6.6e-15 86.3 163 33.7
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-14 85.5 80 58.8
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 2.1e-13 81.3 88 54.5
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 8.1e-13 79.3 48 83.3
Cre02.g083400 Chlamydomonas reinhardtii HOM05D006388 ORTHO05D008026 1.3e-10 72.0 171 33.9
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 2.9e-10 70.9 52 71.2
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 5.6e-06 56.6 47 55.3


User provided reference genes

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