Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.949 Acer truncatum HOM05D006423 ORTHO05D008233 7.2e-49 196.8 92 100.0
Atru.chr6.948 Acer truncatum HOM05D006423 ORTHO05D008233 1.7e-42 175.6 89 89.9
Eucgr.G00648 Eucalyptus grandis HOM05D006423 ORTHO05D008233 2.9e-34 148.3 92 73.9
RcHm_v2.0_Chr7g0225141 Rosa chinensis HOM05D006423 ORTHO05D008233 3.8e-34 147.9 87 75.9
Sabra19G0051500 Salix brachista HOM05D006423 ORTHO05D008233 8.5e-34 146.7 85 76.5
Potri.019G041300 Populus trichocarpa HOM05D006423 ORTHO05D008233 4.2e-33 144.4 85 76.5
Ciclev10001185m.g Citrus clementina HOM05D006423 ORTHO05D008233 1.2e-32 142.9 98 69.4
Ca_24452_v3 Cicer arietinum L. HOM05D006423 ORTHO05D008233 1.6e-32 142.5 92 71.7
FvH4_5g30480 Fragaria vesca HOM05D006423 ORTHO05D008233 2.1e-32 142.1 87 71.3
FAN08G0633 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.1e-32 142.1 87 71.3
FAN18G4202 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.1e-32 142.1 87 71.3
Phvul.002G038000 Phaseolus vulgaris HOM05D006423 ORTHO05D008233 6.1e-32 140.6 85 72.9
FAN13G0653 Fragaria x ananassa HOM05D006423 ORTHO05D008233 8.0e-32 140.2 87 70.1
Psat0s769g0120 Pisum sativum HOM05D006423 ORTHO05D008233 8.0e-32 140.2 92 68.5
Haze_10785 Corylus avellana HOM05D006423 ORTHO05D008233 1.0e-31 139.8 98 66.3
Cfa005566 Carpinus fangiana HOM05D006423 ORTHO05D008233 1.8e-31 139.0 89 69.7
TWI14G0718 Tripterygium wilfordii HOM05D006423 ORTHO05D008233 2.3e-31 138.7 85 70.6
Medtr5g007970 Medicago truncatula HOM05D006423 ORTHO05D008233 3.0e-31 138.3 92 69.6
CiPaw.05G040800 Carya illinoinensis HOM05D006423 ORTHO05D008233 4.0e-31 137.9 84 72.6
QL02p073223 Quercus lobata HOM05D006423 ORTHO05D008233 5.2e-31 137.5 89 74.2
Sed0023404 Sechium edule HOM05D006423 ORTHO05D008233 6.7e-31 137.1 92 67.4
VMungo1215G0185 Vigna mungo HOM05D006423 ORTHO05D008233 6.7e-31 137.1 84 72.6
Glyma.12G035900 Glycine max HOM05D006423 ORTHO05D008233 8.8e-31 136.7 87 69.0
MD04G1037900 Malus domestica HOM05D006423 ORTHO05D008233 8.8e-31 136.7 93 64.5
Prupe.1G561000 Prunus persica HOM05D006423 ORTHO05D008233 1.2e-30 136.3 87 71.3
AT5G62030 Arabidopsis thaliana HOM05D006423 ORTHO05D008233 1.5e-30 136.0 91 70.3
CsaV3_7G006110 Cucumis sativus L. HOM05D006423 ORTHO05D008233 1.5e-30 136.0 95 67.4
Glyma.09G222400 Glycine max HOM05D006423 ORTHO05D008233 1.5e-30 136.0 90 68.9
ClCG09G013540 Citrullus lanatus HOM05D006423 ORTHO05D008233 2.0e-30 135.6 82 73.2
C03p65030 Brassica napus HOM05D006423 ORTHO05D008233 2.6e-30 135.2 92 69.6
BolC3t18761H Brassica oleracea HOM05D006423 ORTHO05D008233 2.6e-30 135.2 92 69.6
Sp2g25200 Schrenkiella parvula HOM05D006423 ORTHO05D008233 3.3e-30 134.8 91 69.2
FAN04G1985 Fragaria x ananassa HOM05D006423 ORTHO05D008233 4.4e-30 134.4 81 71.6
DCAR_004588 Daucus carota HOM05D006423 ORTHO05D008233 5.7e-30 134.0 87 71.3
LjContig00222g0011935 Lotus japonicus HOM05D006423 ORTHO05D008233 5.7e-30 134.0 88 68.2
AL8G38790 Arabidopsis lyrata HOM05D006423 ORTHO05D008233 7.5e-30 133.7 91 69.2
A06p28730 Brassica napus HOM05D006423 ORTHO05D008233 7.5e-30 133.7 92 68.5
BraA06t25814Z Brassica rapa HOM05D006423 ORTHO05D008233 7.5e-30 133.7 92 68.5
MELO3C018682.2 Cucumis melo HOM05D006423 ORTHO05D008233 7.5e-30 133.7 93 64.5
Dinv06913 Davidia involucrata HOM05D006423 ORTHO05D008233 7.5e-30 133.7 84 71.4
PGR042G0678 Punica granatum HOM05D006423 ORTHO05D008233 9.7e-30 133.3 95 66.3
Lalb_Chr05g0211301 Lupinus albus HOM05D006423 ORTHO05D008233 2.2e-29 132.1 93 65.6
Manes.14G151100 Manihot esculenta HOM05D006423 ORTHO05D008233 3.7e-29 131.3 103 61.2
arahy.Tifrunner.gnm1.ann1.B7BMME Arachis hypogaea HOM05D006423 ORTHO05D008233 4.8e-29 131.0 90 70.0
vmacro00241 Vaccinium macrocarpon HOM05D006423 ORTHO05D008233 4.8e-29 131.0 90 66.7
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea HOM05D006423 ORTHO05D008233 6.3e-29 130.6 90 70.0
arahy.Tifrunner.gnm1.ann1.K9W603 Arachis hypogaea HOM05D006423 ORTHO05D008233 6.3e-29 130.6 90 70.0
SHI26338 Sapria himalayana HOM05D006423 ORTHO05D008233 6.3e-29 130.6 82 72.0
PGSC0003DMG400016779 Solanum tuberosum HOM05D006423 ORTHO05D008233 1.4e-28 129.4 89 65.2
Thhalv10004160m.g Eutrema salsugineum HOM05D006423 ORTHO05D008233 1.8e-28 129.0 95 65.3
AUR62004741 Chenopodium quinoa HOM05D006423 ORTHO05D008233 2.4e-28 128.6 96 61.5
AUR62037510 Chenopodium quinoa HOM05D006423 ORTHO05D008233 2.4e-28 128.6 95 63.2
Duzib132G0113 Durio zibethinus HOM05D006423 ORTHO05D008233 2.4e-28 128.6 100 62.0
Rhsim11G0029000 Rhododendron simsii HOM05D006423 ORTHO05D008233 2.4e-28 128.6 89 68.5
Thecc.02G043600 Theobroma cacao HOM05D006423 ORTHO05D008233 2.4e-28 128.6 97 63.9
Carub.0008s2271 Capsella rubella HOM05D006423 ORTHO05D008233 3.1e-28 128.3 91 68.1
COL.COLO4_17915 Corchorus olitorius HOM05D006423 ORTHO05D008233 3.1e-28 128.3 87 70.1
Gorai.005G259400 Gossypium raimondii HOM05D006423 ORTHO05D008233 3.1e-28 128.3 87 67.8
Aa31LG11G1500 Aethionema arabicum HOM05D006423 ORTHO05D008233 5.3e-28 127.5 90 66.7
Nitab4.5_0002429g0030 Nicotiana tabacum HOM05D003584 ORTHO05D008233 5.3e-28 127.5 84 67.9
Peaxi162Scf00185g01125 Petunia axillaris HOM05D006423 ORTHO05D008233 5.3e-28 127.5 84 67.9
CARHR275820 Cardamine hirsuta HOM05D006423 ORTHO05D008233 7.0e-28 127.1 91 67.0
Gohir.D02G231700 Gossypium hirsutum HOM05D006423 ORTHO05D008233 7.0e-28 127.1 87 66.7
HanXRQChr03g0082011 Helianthus annuus HOM05D006423 ORTHO05D008233 7.0e-28 127.1 86 65.1
arahy.Tifrunner.gnm1.ann1.F1VCW7 Arachis hypogaea HOM05D006423 ORTHO05D008233 9.1e-28 126.7 90 66.7
arahy.Tifrunner.gnm1.ann1.WK2353 Arachis hypogaea HOM05D006423 ORTHO05D008233 1.2e-27 126.3 90 68.9
Lj8A319T61 Lonicera japonica HOM05D006423 ORTHO05D008233 1.2e-27 126.3 94 63.8
Nitab4.5_0001632g0060 Nicotiana tabacum HOM05D006423 ORTHO05D008233 1.2e-27 126.3 84 67.9
THA.LOC104798941 Tarenaya hassleriana HOM05D006423 ORTHO05D008233 1.2e-27 126.3 82 70.7
BcaB02g09615 Brassica carinata HOM05D006423 ORTHO05D008233 1.6e-27 125.9 94 62.8
Lsat_1_v5_gn_6_73261 Lactuca sativa HOM05D006423 ORTHO05D008233 2.0e-27 125.6 91 65.9
Sopen06g021720 Solanum pennellii HOM05D006423 ORTHO05D008233 2.0e-27 125.6 84 66.7
Actinidia01333 Actinidia chinensis HOM05D006423 ORTHO05D008233 2.7e-27 125.2 103 58.3
Cc08_g03820 Coffea canephora HOM05D006423 ORTHO05D008233 2.7e-27 125.2 89 65.2
TAR623G1045 Trochodendron aralioides HOM05D006423 ORTHO05D008233 2.7e-27 125.2 95 64.2
arahy.Tifrunner.gnm1.ann1.5N158K Arachis hypogaea HOM05D006423 ORTHO05D008233 3.5e-27 124.8 79 69.6
CAN.G474.25 Capsicum annuum HOM05D006423 ORTHO05D008233 3.5e-27 124.8 84 66.7
ECA240G4319 Erigeron canadensis HOM05D006423 ORTHO05D008233 4.5e-27 124.4 95 61.1
Solyc06g066300.1 Solanum lycopersicum HOM05D006423 ORTHO05D008233 4.5e-27 124.4 80 68.8
EL10Ac4g08897 Beta vulgaris HOM05D006423 ORTHO05D008233 5.9e-27 124.0 84 67.9
PSO170G0343 Papaver somniferum HOM05D006423 ORTHO05D008233 5.9e-27 124.0 84 66.7
Aqoxy4G02654 Aquilegia oxysepala HOM05D006423 ORTHO05D008233 7.7e-27 123.6 90 63.3
MBI10_g26061_MAGBIO Magnolia biondii HOM05D006423 ORTHO05D008233 1.0e-26 123.2 91 65.9
TAR622G0998 Trochodendron aralioides HOM05D006423 ORTHO05D008233 1.0e-26 123.2 83 71.1
CSS0010106 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 1.3e-26 122.9 94 61.7
CSS0049051 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 1.7e-26 122.5 90 64.4
Gohir.A03G210100 Gossypium hirsutum HOM05D006423 ORTHO05D008233 2.2e-26 122.1 83 65.1
Nn2g14478 Nelumbo nucifera HOM05D006423 ORTHO05D008233 2.2e-26 122.1 93 61.3
PSO782G4910 Papaver somniferum HOM05D006423 ORTHO05D008233 2.9e-26 121.7 84 65.5
SGA_v2.0_scaffold96G29045 Striga asiatica HOM05D006423 ORTHO05D008233 3.8e-26 121.3 89 60.7
MSTRG.11901 Avicennia marina HOM05D006423 ORTHO05D008233 6.5e-26 120.6 95 60.0
Sc20g0000910 Simmondsia chinensis HOM05D006423 ORTHO05D008233 1.9e-25 119.0 94 57.4
Ah.04g162870 Amaranthus hybridus HOM05D006423 ORTHO05D008233 3.2e-25 118.2 84 61.9
unitig_748.g8133 Utricularia gibba HOM05D006423 ORTHO05D008233 4.2e-25 117.9 89 57.3
Migut.A00614 Erythranthe guttata HOM05D006423 ORTHO05D008233 1.6e-24 115.9 98 55.1
SalBow1G0435 Salvia bowleyana HOM05D006423 ORTHO05D008233 1.6e-24 115.9 97 55.7
SalBow1G8647 Salvia bowleyana HOM05D006423 ORTHO05D008233 1.6e-24 115.9 97 55.7
SEGI_34782 Sequoiadendron giganteum HOM05D006423 ORTHO05D008233 1.6e-24 115.9 90 53.3
arahy.Tifrunner.gnm1.ann1.Z7R28B Arachis hypogaea HOM05D006423 ORTHO05D008233 3.6e-24 114.8 87 65.5
Os02g0815600 Oryza sativa ssp. japonica HOM05D006423 ORTHO05D008233 2.3e-23 112.1 99 49.5
ATR0564G315 Amborella trichopoda HOM05D006423 ORTHO05D008233 3.0e-23 111.7 72 62.5
HPP92_012832 Vanilla planifolia HOM05D006423 ORTHO05D008233 4.0e-23 111.3 70 67.1
Zm00001eb258780 Zea mays HOM05D006423 ORTHO05D008233 5.2e-23 110.9 85 56.5
CDE05G2804 Ceratophyllum demersum HOM05D006423 ORTHO05D008233 6.8e-23 110.5 73 65.8
arahy.Tifrunner.gnm1.ann1.VBI12C Arachis hypogaea HOM05D006423 ORTHO05D008233 1.2e-22 109.8 86 62.8
SMO165G0082 Selaginella moellendorffii HOM05D006423 ORTHO05D008233 2.0e-22 109.0 96 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2159 Anthoceros agrestis HOM05D006423 ORTHO05D008233 3.4e-22 108.2 72 59.7
Mapoly0002s0072 Marchantia polymorpha HOM05D006423 ORTHO05D008233 1.3e-21 106.3 90 51.1
CBR_g39210 Chara braunii HOM05D006423 ORTHO05D008233 1.8e-20 102.4 81 54.3
arahy.Tifrunner.gnm1.ann1.8H8UTP Arachis hypogaea HOM05D006423 ORTHO05D008233 1.2e-19 99.8 106 49.1
Pp3c15_23540 Physcomitrium patens HOM05D006423 ORTHO05D008233 7.7e-19 97.1 72 52.8
GSVIVG01005261001 Vitis vinifera HOM05D006423 ORTHO05D008233 2.8e-16 88.6 46 87.0
Actinidia29280 Actinidia chinensis HOM05D006423 ORTHO05D008233 2.0e-14 82.4 54 63.0
Cre09.g408500 Chlamydomonas reinhardtii HOM05D006423 ORTHO05D008233 7.5e-14 80.5 73 47.9
PRCOL_00005581 Prasinoderma coloniale HOM05D006423 ORTHO05D008233 4.5e-11 71.2 73 43.8
Haze_26324 Corylus avellana HOM05D006423 ORTHO05D008233 5.7e-06 54.3 48 50.0


User provided reference genes

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