Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.4e-136 489.6 243 100.0
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 2.7e-119 432.2 244 89.8
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 6.0e-119 431.0 234 93.6
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.3e-118 429.1 244 89.3
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 9.5e-117 423.7 237 89.0
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 6.2e-116 421.0 232 90.9
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.1e-115 420.2 235 89.4
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 4.0e-115 418.3 227 92.1
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 8.9e-115 417.2 236 89.8
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 8.9e-115 417.2 232 90.1
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 2.6e-114 415.6 231 90.5
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 4.4e-114 414.8 237 88.2
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 2.2e-113 412.5 238 88.7
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 3.7e-113 411.8 235 88.9
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 2.4e-112 409.1 238 87.8
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 7.1e-112 407.5 232 88.8
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 9.2e-112 407.1 239 85.8
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 9.2e-112 407.1 236 86.9
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.2e-111 406.8 225 90.7
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 1.2e-111 406.8 234 87.2
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 4.6e-111 404.8 224 91.1
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 7.8e-111 404.1 234 87.6
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 7.8e-111 404.1 234 87.6
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 6.6e-110 401.0 235 85.1
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 8.6e-110 400.6 238 84.9
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 2.5e-109 399.1 229 87.8
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 3.3e-109 398.7 232 87.1
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.3e-109 398.3 242 85.5
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 4.3e-109 398.3 237 86.1
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.6e-108 396.4 232 85.3
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 2.8e-108 395.6 235 85.1
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 4.7e-108 394.8 228 86.8
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 8.1e-108 394.0 237 85.2
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 1.4e-107 393.3 234 85.0
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.4e-107 393.3 242 84.3
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 2.4e-107 392.5 241 84.6
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 4.0e-107 391.7 234 84.6
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 4.0e-107 391.7 232 85.3
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 4.0e-107 391.7 233 86.3
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 8.9e-107 390.6 237 84.4
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 8.9e-107 390.6 232 84.9
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.5e-106 389.8 232 86.6
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 2.0e-106 389.4 235 86.4
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 3.4e-106 388.7 238 80.3
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 5.8e-106 387.9 258 79.5
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 5.8e-106 387.9 258 79.5
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 7.6e-106 387.5 232 83.6
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.3e-105 386.7 243 83.1
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 2.2e-105 386.0 225 87.1
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.9e-105 385.6 244 82.4
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-104 383.3 232 83.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-104 383.3 232 83.2
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 3.2e-104 382.1 237 81.0
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 5.4e-104 381.3 232 83.6
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 5.4e-104 381.3 225 84.9
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 9.2e-104 380.6 252 81.3
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 1.2e-103 380.2 224 87.9
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 1.7e-102 376.3 240 82.1
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 3.0e-102 375.6 244 81.1
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 9.6e-101 370.5 227 83.7
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 1.6e-100 369.8 223 84.8
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 2.1e-100 369.4 228 80.7
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.7e-100 368.2 235 79.6
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 8.1e-100 367.5 238 76.5
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.4e-99 365.9 235 79.1
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.0e-98 362.8 238 79.8
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 2.0e-98 362.8 238 79.8
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.7e-97 359.8 239 75.7
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 3.2e-96 355.5 254 75.2
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.6e-95 353.2 233 74.2
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.5e-95 352.1 241 73.9
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.0e-94 350.5 228 76.3
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.7e-94 349.7 228 75.4
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 3.9e-94 348.6 200 90.0
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 8.7e-94 347.4 239 72.0
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 5.3e-91 338.2 249 73.1
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.0e-90 336.3 249 72.7
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 1.7e-89 333.2 226 77.0
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.4e-88 330.1 235 73.6
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 7.1e-88 327.8 203 82.3
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 3.0e-86 322.4 232 71.6
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.1e-85 320.5 204 82.4
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 2.8e-84 315.8 177 88.1
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 6.9e-83 311.2 201 80.6
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 4.9e-73 278.5 224 68.8
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 1.6e-71 273.5 245 62.0
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.5e-69 266.2 226 61.5
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 2.8e-68 262.7 138 91.3
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 6.7e-62 241.5 141 89.4
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.1e-59 234.2 221 52.0
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.5e-58 228.8 163 74.2
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 4.2e-56 222.2 243 52.7
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 5.5e-56 221.9 221 52.0
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 6.1e-55 218.4 153 75.8
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.8e-30 137.1 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.7e-25 120.6 219 33.8
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 3.5e-18 96.3 126 51.6
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.7e-12 77.4 57 68.4


User provided reference genes

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