Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 3.7e-241 837.8 422 100.0
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 7.7e-239 830.1 422 99.1
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.3e-190 669.1 422 79.1
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.2e-178 630.2 430 75.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.7e-177 625.2 391 78.5
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 4.9e-177 624.8 396 75.3
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 5.4e-176 621.3 385 79.5
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 2.1e-175 619.4 420 73.8
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.0e-174 615.5 424 73.6
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 8.6e-174 614.0 367 81.7
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.1e-173 613.6 397 76.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.1e-173 613.6 403 74.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.5e-173 613.2 423 73.5
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.3e-173 612.1 426 72.5
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 5.6e-173 611.3 390 76.9
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 2.1e-172 609.4 381 78.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 6.2e-172 607.8 395 77.0
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 6.2e-172 607.8 392 77.3
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.0e-171 605.1 394 76.9
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 2.2e-169 599.4 370 79.5
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 6.4e-169 597.8 381 76.9
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.1e-168 597.0 401 72.8
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.3e-166 590.1 401 73.3
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.7e-166 589.7 386 75.4
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 3.0e-166 589.0 387 74.7
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 3.0e-166 589.0 389 74.0
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.1e-165 587.0 422 69.2
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.5e-165 586.6 401 71.6
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.2e-164 583.6 422 69.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.6e-164 583.2 391 72.6
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 2.8e-164 582.4 375 74.1
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.1e-163 580.5 365 75.1
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 3.1e-163 578.9 368 76.6
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 9.0e-163 577.4 395 71.9
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.2e-162 577.0 365 75.9
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.0e-162 576.2 377 74.0
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 1.3e-161 573.5 374 73.8
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.9e-161 572.4 375 72.3
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.8e-161 572.0 375 72.3
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 3.2e-160 568.9 369 73.7
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 5.4e-160 568.2 367 74.7
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 9.3e-160 567.4 439 64.9
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 9.3e-160 567.4 432 66.4
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 9.3e-160 567.4 429 65.5
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.2e-159 567.0 360 75.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.1e-159 566.2 384 70.8
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 2.7e-159 565.8 419 67.8
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.7e-159 565.8 422 66.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 7.8e-159 564.3 419 66.1
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.3e-158 562.8 419 66.3
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 6.6e-158 561.2 377 71.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.1e-157 560.5 419 66.3
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 7.3e-157 557.8 415 66.3
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.3e-156 557.0 433 65.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 2.8e-156 555.8 374 71.1
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 3.6e-156 555.4 349 75.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.8e-155 553.1 364 72.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.8e-155 553.1 423 68.6
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 2.4e-155 552.7 439 64.5
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 4.0e-155 552.0 346 75.4
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.2e-154 550.4 384 69.0
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.2e-153 546.2 420 67.4
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.1e-152 543.9 386 72.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.4e-152 543.5 352 75.9
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 3.5e-151 538.9 392 67.3
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 3.0e-150 535.8 378 69.0
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.5e-149 533.5 367 70.6
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 9.6e-149 530.8 369 69.4
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.6e-148 530.0 393 68.4
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 3.7e-148 528.9 375 68.8
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.1e-147 527.3 380 68.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.0e-147 525.4 386 70.2
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 9.9e-146 520.8 360 71.7
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.4e-144 516.9 364 69.5
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.4e-144 516.9 363 69.4
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.0e-143 511.5 349 73.1
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 3.0e-142 509.2 408 61.3
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.6e-140 503.4 420 61.2
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 4.8e-140 501.9 505 54.1
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.3e-134 483.0 355 68.7
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 6.3e-132 474.9 366 62.3
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 7.2e-128 461.5 281 79.4
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.4e-123 446.4 371 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 4.2e-120 435.6 347 59.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 6.1e-119 431.8 434 56.0
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.8e-118 430.3 370 60.8
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.9e-112 410.2 386 59.1
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 9.1e-107 391.3 358 52.8
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.6e-106 390.6 372 57.0
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 5.0e-105 385.6 339 54.6
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 3.0e-102 376.3 289 64.4
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.5e-101 374.0 289 64.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-96 356.7 394 47.0
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 4.4e-93 345.9 286 61.5
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.7e-84 317.4 325 51.1
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.5e-72 276.9 365 47.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 7.8e-66 255.4 375 38.7
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 4.7e-55 219.5 128 79.7
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.8e-52 209.9 130 75.4
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.7e-42 177.2 180 52.8
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.5e-42 176.8 133 67.7
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 7.3e-40 169.1 108 74.1
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.4e-27 128.3 111 58.6
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.1e-26 124.4 79 69.6
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.7e-26 124.0 125 54.4
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 6.7e-25 119.4 171 44.4
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.0e-22 110.2 161 40.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 7.6e-21 105.9 375 26.4
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 2.5e-19 100.9 99 53.5
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 5.5e-19 99.8 78 64.1
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.2e-18 98.6 67 67.2
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-17 95.5 76 64.5
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 5.7e-16 89.7 178 36.0
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 5.7e-16 89.7 224 30.4
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 6.9e-14 82.8 52 75.0
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.2e-12 77.8 53 69.8
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 1.8e-06 58.2 32 75.0


User provided reference genes

Program Settings