Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 5.8e-65 251.1 166 100.0
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.1e-18 97.4 153 42.5
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 1.1e-18 97.4 145 45.5
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.4e-18 97.1 159 40.3
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.4e-18 96.3 170 39.4
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.3e-18 95.1 155 40.6
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.9e-18 94.7 166 37.3
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 9.0e-18 94.4 166 37.3
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.5e-17 93.6 171 38.6
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.5e-17 93.6 173 50.3
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.6e-17 92.8 173 44.5
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 2.6e-17 92.8 166 37.3
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 4.5e-17 92.0 172 37.2
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 4.5e-17 92.0 151 38.4
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 5.9e-17 91.7 172 40.1
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 5.9e-17 91.7 166 37.3
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 7.7e-17 91.3 167 37.1
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.0e-16 90.9 173 49.7
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.3e-16 90.5 169 37.9
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.7e-16 90.1 155 39.4
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 2.2e-16 89.7 155 38.7
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 3.8e-16 89.0 148 39.2
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 8.5e-16 87.8 145 40.7
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 8.5e-16 87.8 145 40.7
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 1.1e-15 87.4 160 38.1
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-15 87.4 185 37.3
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-15 87.4 156 41.0
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.9e-15 86.7 184 36.4
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 4.2e-15 85.5 173 37.0
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 9.4e-15 84.3 143 36.4
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 9.4e-15 84.3 144 38.2
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 9.4e-15 84.3 161 37.9
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 4.6e-14 82.0 151 38.4
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 6.1e-14 81.6 151 40.4
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 7.9e-14 81.3 151 37.7
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 3.0e-13 79.3 168 34.5
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 3.0e-13 79.3 152 37.5
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 3.9e-13 79.0 184 34.2
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.9e-13 79.0 152 37.5
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 5.1e-13 78.6 166 49.4
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 5.1e-13 78.6 146 37.7
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 2.0e-12 76.6 153 39.2
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 2.0e-12 76.6 174 36.2
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 2.0e-12 76.6 143 39.2
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 3.3e-12 75.9 171 33.9
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 3.3e-12 75.9 184 47.8
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 3.3e-12 75.9 153 34.0
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 5.7e-12 75.1 46 71.7
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 7.4e-12 74.7 144 37.5
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.7e-11 73.6 178 39.3
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.7e-11 73.6 142 38.0
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 2.2e-11 73.2 149 38.3
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 2.2e-11 73.2 150 35.3
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 2.8e-11 72.8 181 42.5
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 4.8e-11 72.0 145 37.2
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 6.3e-11 71.6 153 35.9
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 8.2e-11 71.2 139 39.6
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.1e-10 70.9 146 36.3
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.1e-10 70.9 153 34.0
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.1e-10 70.9 38 78.9
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 1.4e-10 70.5 138 36.2
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 2.4e-10 69.7 149 35.6
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.1e-10 69.3 153 34.0
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 3.1e-10 69.3 153 37.9
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.1e-10 68.9 153 35.3
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 6.9e-10 68.2 47 63.8
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.1e-10 67.8 159 35.2
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.1e-10 67.8 153 33.3
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 1.5e-09 67.0 154 32.5
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 2.6e-09 66.2 151 33.8
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 3.4e-09 65.9 155 32.3
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.7e-09 64.7 151 33.8
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.0e-08 64.3 146 34.9
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 1.0e-08 64.3 139 32.4
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.0e-08 64.3 151 34.4
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 1.3e-08 63.9 145 33.1
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.3e-08 63.9 112 39.3
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.7e-08 63.5 171 33.3
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 1.7e-08 63.5 40 70.0
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.7e-08 63.5 152 32.2
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 2.2e-08 63.2 144 32.6
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.8e-08 62.4 44 68.2
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 3.8e-08 62.4 144 38.9
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.8e-08 62.4 42 66.7
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 3.8e-08 62.4 143 36.4
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 5.0e-08 62.0 38 76.3
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 5.0e-08 62.0 149 32.9
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 5.0e-08 62.0 44 61.4
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 6.5e-08 61.6 44 63.6
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 8.5e-08 61.2 39 66.7
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 8.5e-08 61.2 171 34.5
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 8.5e-08 61.2 44 61.4
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 8.5e-08 61.2 38 71.1
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 1.1e-07 60.8 173 30.1
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 1.9e-07 60.1 38 71.1
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.5e-07 59.7 146 28.1
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 2.5e-07 59.7 44 59.1
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 3.2e-07 59.3 105 41.0
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 4.2e-07 58.9 167 28.1
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 9.4e-07 57.8 143 33.6
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.2e-06 57.4 171 31.6
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 1.6e-06 57.0 139 33.1
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.6e-06 57.0 39 64.1
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.1e-06 56.6 31 77.4
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 2.1e-06 56.6 136 47.8
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 2.1e-06 56.6 139 33.1
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 2.1e-06 56.6 153 32.7
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.1e-06 56.6 42 59.5
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 2.7e-06 56.2 47 59.6
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 2.7e-06 56.2 47 59.6
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 2.7e-06 56.2 47 59.6
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 3.6e-06 55.8 33 75.8
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.7e-06 55.5 31 74.2
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 4.7e-06 55.5 38 65.8
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 4.7e-06 55.5 38 57.9
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 6.1e-06 55.1 35 71.4
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 6.1e-06 55.1 141 39.7
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 6.1e-06 55.1 43 60.5
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 6.1e-06 55.1 37 67.6
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 6.1e-06 55.1 136 31.6


User provided reference genes

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