Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 2.5e-107 392.1 196 100.0
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.1e-86 323.6 196 81.6
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 2.9e-84 315.5 196 79.6
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 8.6e-84 313.9 196 80.1
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 2.5e-83 312.4 196 78.6
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 9.5e-83 310.5 196 78.1
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.6e-82 309.7 196 78.6
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 8.0e-82 307.4 194 77.8
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 1.8e-81 306.2 194 77.8
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.8e-81 306.2 196 78.1
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 4.0e-81 305.1 192 76.0
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 5.2e-81 304.7 190 78.9
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 5.2e-81 304.7 196 77.6
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 8.9e-81 303.9 194 75.8
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 8.9e-81 303.9 194 76.8
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.0e-80 302.8 196 77.6
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 2.6e-80 302.4 196 76.0
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 3.4e-80 302.0 194 77.3
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 7.5e-80 300.8 195 75.9
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 9.8e-80 300.4 195 75.9
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 2.2e-79 299.3 196 75.5
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 6.4e-79 297.7 195 74.9
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.9e-78 296.2 188 78.7
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.9e-78 296.2 194 75.3
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 4.1e-78 295.0 196 73.5
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 9.2e-78 293.9 196 74.0
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 1.6e-77 293.1 194 75.3
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 1.6e-77 293.1 196 73.0
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 2.0e-77 292.7 194 75.3
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 4.6e-77 291.6 180 79.4
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 4.6e-77 291.6 196 73.5
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 1.0e-76 290.4 192 75.5
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 1.7e-76 289.7 196 71.4
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 5.0e-76 288.1 196 73.5
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 8.6e-76 287.3 188 76.1
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.5e-75 286.6 196 70.9
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 2.5e-75 285.8 194 72.2
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 2.5e-75 285.8 189 73.0
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.5e-75 285.8 195 71.8
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 3.3e-75 285.4 194 72.2
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 4.3e-75 285.0 195 71.8
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 9.5e-75 283.9 193 72.5
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.6e-74 283.1 194 70.6
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 2.8e-74 282.3 195 70.8
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 3.6e-74 282.0 187 73.8
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 4.7e-74 281.6 198 69.7
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 6.2e-74 281.2 195 70.3
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.4e-73 280.0 195 70.3
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.8e-73 279.6 195 71.3
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.5e-72 276.6 156 86.5
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.5e-72 276.6 195 68.2
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 4.4e-72 275.0 193 69.9
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 4.4e-72 275.0 195 68.7
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 9.8e-72 273.9 195 68.7
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 2.2e-71 272.7 195 69.7
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 2.9e-71 272.3 194 69.6
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 3.7e-71 271.9 190 73.2
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 3.7e-71 271.9 187 75.4
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 4.9e-71 271.6 195 69.2
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 8.3e-71 270.8 195 68.2
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 8.3e-71 270.8 195 67.2
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 1.1e-70 270.4 180 74.4
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.9e-70 269.6 193 68.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 2.4e-70 269.2 169 78.1
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.2e-70 268.9 171 76.6
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 7.8e-69 264.2 257 56.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 8.6e-68 260.8 194 66.0
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.1e-67 260.4 174 71.8
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.5e-67 259.2 170 76.5
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 9.5e-67 257.3 188 67.6
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.2e-66 256.9 192 69.3
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 4.7e-66 255.0 181 69.1
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 4.7e-66 255.0 150 83.3
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 8.1e-66 254.2 266 54.1
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.2e-65 251.5 201 66.7
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 1.4e-62 243.4 176 67.6
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 7.1e-62 241.1 196 63.8
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 7.1e-62 241.1 170 73.5
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.5e-59 232.6 342 41.5
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.8e-58 229.2 143 76.9
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.4e-57 226.1 168 69.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.7e-55 219.9 319 41.4
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.7e-55 219.9 319 41.4
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 4.9e-55 218.4 150 68.7
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.2e-50 203.8 195 56.4
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.8e-49 199.9 170 55.9
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 4.0e-49 198.7 172 56.4
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.0e-48 196.4 137 72.3
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 8.4e-47 191.0 136 70.6
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 1.4e-46 190.3 136 71.3
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 6.0e-45 184.9 199 51.3
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 8.7e-44 181.0 110 76.4
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 2.2e-39 166.4 134 61.2
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 4.9e-39 165.2 121 67.8
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.1e-37 159.8 214 48.1
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 1.0e-36 157.5 171 48.5
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 1.8e-33 146.7 277 33.9
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 7.9e-29 131.3 87 75.9
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.1e-27 127.5 109 58.7
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.6e-27 125.2 85 75.3
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 2.0e-24 116.7 82 62.2
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 1.8e-20 103.6 72 73.6
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 6.3e-18 95.1 114 50.9
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 1.2e-16 90.9 129 41.1
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 3.8e-15 85.9 166 37.3
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 1.0e-12 77.8 55 67.3
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 2.3e-12 76.6 98 43.9
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 1.7e-10 70.5 49 71.4
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.4e-06 57.4 41 58.5


User provided reference genes

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