Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3318 Acer truncatum HOM05D006660 ORTHO05D008184 3.1e-218 761.5 385 100.0
Atru.chr6.3323 Acer truncatum HOM05D006660 ORTHO05D008184 1.2e-209 733.0 403 93.3
Ciclev10014722m.g Citrus clementina HOM05D006660 ORTHO05D008184 4.8e-179 631.3 406 78.8
Haze_12725 Corylus avellana HOM05D006660 ORTHO05D008184 1.9e-172 609.4 401 77.3
Thecc.01G186300 Theobroma cacao HOM05D006660 ORTHO05D008184 7.4e-172 607.4 408 75.7
Gorai.001G097700 Gossypium raimondii HOM05D006660 ORTHO05D008184 3.7e-171 605.1 409 74.8
Gohir.D07G091200 Gossypium hirsutum HOM05D006660 ORTHO05D008184 5.3e-170 601.3 409 74.6
Gohir.A07G086100 Gossypium hirsutum HOM05D006660 ORTHO05D008184 1.2e-169 600.1 409 74.1
Potri.014G163200 Populus trichocarpa HOM05D006660 ORTHO05D008184 2.2e-168 595.9 398 74.9
Dinv07831 Davidia involucrata HOM05D006660 ORTHO05D008184 8.4e-168 594.0 406 74.4
Manes.12G060700 Manihot esculenta HOM05D006660 ORTHO05D008184 8.4e-168 594.0 400 76.2
Sabra14G0124600 Salix brachista HOM05D006660 ORTHO05D008184 1.2e-166 590.1 399 74.2
PGR142G4370 Punica granatum HOM05D006660 ORTHO05D008184 1.6e-166 589.7 402 72.9
RcHm_v2.0_Chr2g0157231 Rosa chinensis HOM05D006660 ORTHO05D008184 6.0e-166 587.8 399 75.2
FvH4_6g41550 Fragaria vesca HOM05D006660 ORTHO05D008184 2.3e-165 585.9 400 74.5
FAN14G2696 Fragaria x ananassa HOM05D006660 ORTHO05D008184 2.3e-165 585.9 400 74.5
FAN14G4026 Fragaria x ananassa HOM05D006660 ORTHO05D008184 2.3e-165 585.9 400 74.5
Actinidia10783 Actinidia chinensis HOM05D006660 ORTHO05D008184 3.0e-165 585.5 399 74.4
COL.COLO4_35986 Corchorus olitorius HOM05D006660 ORTHO05D008184 6.7e-165 584.3 408 72.1
Nn1g07385 Nelumbo nucifera HOM05D006660 ORTHO05D008184 6.7e-165 584.3 406 73.2
Prupe.3G205300 Prunus persica HOM05D006660 ORTHO05D008184 8.7e-165 583.9 400 74.0
Solyc07g049590.3 Solanum lycopersicum HOM05D006660 ORTHO05D008184 1.1e-164 583.6 394 74.9
CiPaw.04G193900 Carya illinoinensis HOM05D006660 ORTHO05D008184 1.5e-164 583.2 405 72.6
CAN.G784.8 Capsicum annuum HOM05D006660 ORTHO05D008184 2.5e-164 582.4 394 74.1
FAN02G1797 Fragaria x ananassa HOM05D006660 ORTHO05D008184 2.5e-164 582.4 399 73.9
Sopen07g024990 Solanum pennellii HOM05D006660 ORTHO05D008184 3.3e-164 582.0 394 74.6
Duzib133G0254 Durio zibethinus HOM05D006660 ORTHO05D008184 4.3e-164 581.6 408 71.8
Rhsim04G0045800 Rhododendron simsii HOM05D006660 ORTHO05D008184 4.3e-164 581.6 406 72.7
Nitab4.5_0008746g0020 Nicotiana tabacum HOM05D006660 ORTHO05D008184 7.4e-164 580.9 401 73.6
TWI36G0095 Tripterygium wilfordii HOM05D006660 ORTHO05D008184 9.6e-164 580.5 407 73.2
FAN05G5067 Fragaria x ananassa HOM05D006660 ORTHO05D008184 3.7e-163 578.6 399 73.7
PGSC0003DMG400006428 Solanum tuberosum HOM05D006660 ORTHO05D008184 3.7e-163 578.6 394 74.4
Nitab4.5_0000130g0170 Nicotiana tabacum HOM05D006660 ORTHO05D008184 1.1e-162 577.0 404 72.5
CSS0034515 Camellia sinensis var. sinensis HOM05D006660 ORTHO05D008184 4.1e-162 575.1 407 73.0
Sc20g0003860 Simmondsia chinensis HOM05D006660 ORTHO05D008184 6.9e-162 574.3 406 71.7
Eucgr.K00713 Eucalyptus grandis HOM05D006660 ORTHO05D008184 2.2e-160 569.3 407 71.0
Peaxi162Scf01333g00136 Petunia axillaris HOM05D006660 ORTHO05D008184 1.1e-159 567.0 394 72.1
CANSAT64G1453 Cannabis sativa HOM05D006660 ORTHO05D008184 1.4e-159 566.6 400 71.5
TAR626G1025 Trochodendron aralioides HOM05D006660 ORTHO05D008184 1.9e-159 566.2 399 72.2
Oeu040482.1 Olea europaea HOM05D006660 ORTHO05D008184 2.5e-159 565.8 397 72.8
Psat5g103920 Pisum sativum HOM05D006660 ORTHO05D008184 4.6e-158 561.6 388 73.7
Cpa.g.sc132.76 Carica papaya HOM05D006660 ORTHO05D008184 1.0e-157 560.5 401 72.1
Ca_16352_v3 Cicer arietinum L. HOM05D006660 ORTHO05D008184 2.3e-157 559.3 388 73.7
Thhalv10002462m.g Eutrema salsugineum HOM05D006660 ORTHO05D008184 3.0e-157 558.9 404 70.0
arahy.Tifrunner.gnm1.ann1.7S53TL Arachis hypogaea HOM05D006660 ORTHO05D008184 5.1e-157 558.1 393 72.8
arahy.Tifrunner.gnm1.ann1.GN08CG Arachis hypogaea HOM05D006660 ORTHO05D008184 5.1e-157 558.1 393 72.8
MSTRG.14936 Avicennia marina HOM05D006660 ORTHO05D008184 1.5e-156 556.6 408 67.6
arahy.Tifrunner.gnm1.ann1.V90YU5 Arachis hypogaea HOM05D006660 ORTHO05D008184 2.5e-156 555.8 393 72.5
Medtr3g082870 Medicago truncatula HOM05D006660 ORTHO05D008184 3.3e-156 555.4 386 72.8
Cc10_g08860 Coffea canephora HOM05D006660 ORTHO05D008184 4.3e-156 555.1 396 70.7
AT2G04740 Arabidopsis thaliana HOM05D006660 ORTHO05D008184 7.4e-156 554.3 403 69.7
Aqoxy1G02841 Aquilegia oxysepala HOM05D006660 ORTHO05D008184 2.2e-155 552.7 403 70.0
THA.LOC104808860 Tarenaya hassleriana HOM05D006660 ORTHO05D008184 2.8e-155 552.4 400 69.0
Aa31sc53G10 Aethionema arabicum HOM05D006660 ORTHO05D008184 8.2e-155 550.8 404 68.6
AL3G42350 Arabidopsis lyrata HOM05D006660 ORTHO05D008184 1.8e-154 549.7 406 69.2
Ah.14g082930 Amaranthus hybridus HOM05D006660 ORTHO05D008184 2.4e-154 549.3 394 68.8
Sp3g23370 Schrenkiella parvula HOM05D006660 ORTHO05D008184 5.3e-154 548.1 404 69.1
TPR.G22464 Trifolium pratense HOM05D006660 ORTHO05D008184 2.0e-153 546.2 402 69.7
Carub.0003s2635 Capsella rubella HOM05D006660 ORTHO05D008184 5.9e-153 544.7 406 68.7
Sed0019714 Sechium edule HOM05D006660 ORTHO05D008184 1.7e-152 543.1 402 69.7
PSO541G2904 Papaver somniferum HOM05D006660 ORTHO05D008184 3.8e-152 542.0 399 67.4
PSO675G7408 Papaver somniferum HOM05D006660 ORTHO05D008184 1.9e-151 539.7 399 67.4
AUR62015095 Chenopodium quinoa HOM05D006660 ORTHO05D008184 1.2e-150 537.0 406 66.5
Lsat_1_v5_gn_5_124741 Lactuca sativa HOM05D006660 ORTHO05D008184 1.6e-150 536.6 394 69.5
CARHR102690 Cardamine hirsuta HOM05D006660 ORTHO05D008184 1.4e-149 533.5 406 67.7
Glyma.20G057100 Glycine max HOM05D006660 ORTHO05D008184 1.8e-149 533.1 377 71.1
DCAR_019721 Daucus carota HOM05D006660 ORTHO05D008184 3.0e-149 532.3 394 68.0
AUR62017555 Chenopodium quinoa HOM05D006660 ORTHO05D008184 1.1e-148 530.4 410 64.9
FAN09G0285 Fragaria x ananassa HOM05D006660 ORTHO05D008184 1.5e-148 530.0 399 69.9
SGA_v2.0_scaffold73G24530 Striga asiatica HOM05D006660 ORTHO05D008184 3.7e-147 525.4 410 65.4
HanXRQChr10g0306331 Helianthus annuus HOM05D006660 ORTHO05D008184 4.8e-147 525.0 396 68.4
CsaV3_2G034260 Cucumis sativus L. HOM05D006660 ORTHO05D008184 1.4e-146 523.5 398 68.3
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 2.4e-146 522.7 401 66.1
MBI16_g31717_MAGBIO Magnolia biondii HOM05D006660 ORTHO05D008184 2.4e-146 522.7 407 64.6
MELO3C019360.2 Cucumis melo HOM05D006660 ORTHO05D008184 9.1e-146 520.8 401 66.6
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 1.2e-145 520.4 406 65.5
ClCG02G009540 Citrullus lanatus HOM05D006660 ORTHO05D008184 1.5e-145 520.0 427 63.9
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 2.0e-145 519.6 406 65.3
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 2.6e-145 519.2 399 66.2
BcaC01g03192 Brassica carinata HOM05D006660 ORTHO05D008184 3.4e-145 518.8 399 66.2
Lj6g0000837 Lotus japonicus HOM05D006660 ORTHO05D008184 7.7e-145 517.7 380 69.2
BcaB08g34485 Brassica carinata HOM05D006660 ORTHO05D008184 1.0e-144 517.3 401 64.8
EL10Ac3g05658 Beta vulgaris HOM05D006660 ORTHO05D008184 8.5e-144 514.2 396 64.6
HPP92_017850 Vanilla planifolia HOM05D006660 ORTHO05D008184 1.4e-143 513.5 402 66.4
Migut.M00006 Erythranthe guttata HOM05D006660 ORTHO05D008184 4.7e-142 508.4 408 65.9
Lj8A132T54 Lonicera japonica HOM05D006660 ORTHO05D008184 1.9e-127 459.9 314 73.2
Zm00001eb281240 Zea mays HOM05D006660 ORTHO05D008184 4.7e-126 455.3 405 59.0
GSVIVG01030415001 Vitis vinifera HOM05D006660 ORTHO05D008184 2.3e-125 453.0 308 74.4
SEGI_29705 Sequoiadendron giganteum HOM05D006660 ORTHO05D008184 4.1e-122 442.2 477 52.2
Os06g0318200 Oryza sativa ssp. japonica HOM05D006660 ORTHO05D008184 1.6e-121 440.3 403 58.3
ECA234G1491 Erigeron canadensis HOM05D006660 ORTHO05D008184 2.7e-113 412.9 384 57.8
Mapoly0031s0110 Marchantia polymorpha HOM05D006660 ORTHO05D008184 3.5e-105 386.0 464 47.6
Pp3c5_19510 Physcomitrium patens HOM05D006660 ORTHO05D008184 1.3e-104 384.0 461 46.6
Pp3c5_19514 Physcomitrium patens HOM05D006660 ORTHO05D008184 1.3e-104 384.0 461 46.6
MD17G1109800 Malus domestica HOM05D006660 ORTHO05D008184 4.1e-98 362.5 246 74.8
SMO353G0185 Selaginella moellendorffii HOM05D006660 ORTHO05D008184 7.3e-95 351.7 355 52.4
vmacro09381 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 1.1e-93 347.8 229 74.7
Lalb_Chr24g0402731 Lupinus albus HOM05D006660 ORTHO05D008184 2.3e-93 346.7 229 74.2
VMungo1309G1541 Vigna mungo HOM05D006660 ORTHO05D008184 6.2e-86 322.0 229 71.6
CDE07G0400 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.2e-78 297.7 229 68.6
ATR0712G111 Amborella trichopoda HOM05D006660 ORTHO05D008184 6.2e-78 295.4 229 64.2
CBR_g47999 Chara braunii HOM05D006660 ORTHO05D008184 5.8e-76 288.9 257 55.6
CDE04G2012 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.2e-60 238.0 297 47.1
AagrBONN_evm.TU.Sc2ySwM_344.2917 Anthoceros agrestis HOM05D006660 ORTHO05D008184 2.9e-59 233.4 395 38.5
CDE07G1994 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 4.9e-59 232.6 165 69.7
AagrBONN_evm.TU.Sc2ySwM_228.2541 Anthoceros agrestis HOM05D006660 ORTHO05D008184 9.3e-58 228.4 399 36.1
ATR0712G102 Amborella trichopoda HOM05D006660 ORTHO05D008184 7.9e-57 225.3 136 80.1
Phvul.004G085870 Phaseolus vulgaris HOM05D006660 ORTHO05D008184 5.1e-56 222.6 134 80.6
VMungo1309G0792 Vigna mungo HOM05D006660 ORTHO05D008184 4.0e-53 213.0 130 80.0
Lalb_Chr24g0402711 Lupinus albus HOM05D006660 ORTHO05D008184 4.3e-47 193.0 105 90.5
Hund08409 Selenicereus undatus HOM05D006660 ORTHO05D008184 1.3e-43 181.4 147 57.8
vmacro09380 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 1.4e-32 144.8 157 53.5
Lj8C132T7 Lonicera japonica HOM05D006660 ORTHO05D008184 1.4e-21 108.2 73 69.9
Cfa027280 Carpinus fangiana HOM05D006660 ORTHO05D008184 3.8e-11 73.6 142 34.5
LjContig00357g0015684 Lotus japonicus HOM05D007663 ORTHO05D009455 6.3e-06 56.2 54 50.0


User provided reference genes

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