Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3258 Acer truncatum HOM05D001356 ORTHO05D030749 2.7e-42 175.3 110 100.0
Ciclev10014736m.g Citrus clementina HOM05D001356 ORTHO05D008843 9.9e-29 130.2 103 68.9
Cpa.g.sc132.23 Carica papaya HOM05D001356 ORTHO05D008843 1.6e-26 122.9 91 71.4
AL3G43340 Arabidopsis lyrata HOM05D001356 ORTHO05D008843 1.9e-24 115.9 81 72.8
AT2G05810 Arabidopsis thaliana HOM05D001356 ORTHO05D008843 3.3e-24 115.2 81 71.6
Thecc.01G182300 Theobroma cacao HOM05D001356 ORTHO05D008843 5.6e-24 114.4 82 72.0
Aa31sc209G100 Aethionema arabicum HOM05D001356 ORTHO05D008843 7.3e-24 114.0 81 69.1
CARHR103390 Cardamine hirsuta HOM05D001356 ORTHO05D008843 9.5e-24 113.6 81 70.4
Carub.0003s2704 Capsella rubella HOM05D001356 ORTHO05D008843 1.2e-23 113.2 81 70.4
Gohir.D11G159700 Gossypium hirsutum HOM05D001356 ORTHO05D008843 3.6e-23 111.7 82 70.7
Duzib138G0129 Durio zibethinus HOM05D001356 ORTHO05D008843 4.7e-23 111.3 82 70.7
Gorai.007G170300 Gossypium raimondii HOM05D001356 ORTHO05D008843 4.7e-23 111.3 82 70.7
COL.COLO4_21880 Corchorus olitorius HOM05D001356 ORTHO05D008843 6.2e-23 110.9 80 71.2
Duzib133G0533 Durio zibethinus HOM05D001356 ORTHO05D008843 1.1e-22 110.2 81 70.4
Potri.014G158700 Populus trichocarpa HOM05D001356 ORTHO05D008843 2.4e-22 109.0 81 70.4
Manes.12G069600 Manihot esculenta HOM05D001356 ORTHO05D008843 4.0e-22 108.2 82 68.3
TWI36G0748 Tripterygium wilfordii HOM05D001356 ORTHO05D008843 6.8e-22 107.5 73 74.0
Gohir.D07G193900 Gossypium hirsutum HOM05D001356 ORTHO05D008843 1.2e-21 106.7 73 74.0
GSVIVG01030505001 Vitis vinifera HOM05D001356 ORTHO05D008843 1.5e-21 106.3 72 72.2
Gorai.001G217000 Gossypium raimondii HOM05D001356 ORTHO05D008843 4.4e-21 104.8 73 72.6
Sabra14G0120500 Salix brachista HOM05D001356 ORTHO05D008843 7.6e-21 104.0 81 65.4
CANSAT64G2058 Cannabis sativa HOM05D001356 ORTHO05D008843 9.9e-21 103.6 79 65.8
Sed0009631 Sechium edule HOM05D001356 ORTHO05D008843 9.9e-21 103.6 70 72.9
RcHm_v2.0_Chr2g0158031 Rosa chinensis HOM05D001356 ORTHO05D008843 3.8e-20 101.7 80 63.8
MELO3C014434.2 Cucumis melo HOM05D001356 ORTHO05D008843 6.4e-20 100.9 70 70.0
Potri.002G224400 Populus trichocarpa HOM05D001356 ORTHO05D008843 8.4e-20 100.5 72 70.8
Prupe.3G210100 Prunus persica HOM05D001356 ORTHO05D008843 8.4e-20 100.5 80 63.8
CsaV3_6G037750 Cucumis sativus L. HOM05D001356 ORTHO05D008843 1.1e-19 100.1 70 70.0
ClCG09G011210 Citrullus lanatus HOM05D001356 ORTHO05D008843 1.9e-19 99.4 70 68.6
Hma1.2p1_0177F.1_g078080 Hydrangea macrophylla HOM05D001356 ORTHO05D008843 1.9e-19 99.4 81 60.5
FvH4_1g21781 Fragaria vesca HOM05D001356 ORTHO05D008843 2.4e-19 99.0 80 65.0
FvH4_6g42120 Fragaria vesca HOM05D001356 ORTHO05D008843 2.4e-19 99.0 80 65.0
FAN14G2477 Fragaria x ananassa HOM05D001356 ORTHO05D008843 2.4e-19 99.0 80 65.0
Actinidia10799 Actinidia chinensis HOM05D001356 ORTHO05D008843 3.2e-19 98.6 72 66.7
FAN02G0691 Fragaria x ananassa HOM05D001356 ORTHO05D008843 3.2e-19 98.6 80 65.0
QL08p030667 Quercus lobata HOM05D001356 ORTHO05D008843 3.2e-19 98.6 71 71.8
Haze_12766 Corylus avellana HOM05D001356 ORTHO05D008843 4.1e-19 98.2 73 67.1
MD09G1114400 Malus domestica HOM05D001356 ORTHO05D008843 5.4e-19 97.8 80 62.5
MD17G1106100 Malus domestica HOM05D001356 ORTHO05D008843 5.4e-19 97.8 80 62.5
FAN05G2749 Fragaria x ananassa HOM05D001356 ORTHO05D008843 7.1e-19 97.4 80 63.8
CiPaw.03G155100 Carya illinoinensis HOM05D001356 ORTHO05D008843 9.2e-19 97.1 72 65.3
TAR020G0002 Trochodendron aralioides HOM05D001356 ORTHO05D008843 9.2e-19 97.1 70 65.7
CSS0027248 Camellia sinensis var. sinensis HOM05D001356 ORTHO05D008843 2.7e-18 95.5 71 66.2
TAR629G2076 Trochodendron aralioides HOM05D001356 ORTHO05D008843 6.0e-18 94.4 70 65.7
Dinv08717 Davidia involucrata HOM05D001356 ORTHO05D008843 7.8e-18 94.0 69 69.6
PGR142G3726 Punica granatum HOM05D001356 ORTHO05D008843 1.0e-17 93.6 92 56.5
DCAR_021139 Daucus carota HOM05D001356 ORTHO05D008843 1.3e-17 93.2 72 65.3
Lsat_1_v5_gn_9_105840 Lactuca sativa HOM05D001356 ORTHO05D008843 1.5e-16 89.7 71 62.0
CDE07G0722 Ceratophyllum demersum HOM05D001356 ORTHO05D008843 1.6e-15 86.3 71 56.3
Aqoxy1G04183 Aquilegia oxysepala HOM05D001356 ORTHO05D008843 3.6e-15 85.1 70 62.9
Lsat_1_v5_gn_5_124581 Lactuca sativa HOM05D001356 ORTHO05D008843 4.7e-15 84.7 71 62.0
Thhalv10028711m.g Eutrema salsugineum HOM05D001356 ORTHO05D008843 6.2e-15 84.3 81 54.3
PSO478G0337 Papaver somniferum HOM05D001356 ORTHO05D008843 6.2e-15 84.3 82 56.1
PSO782G5226 Papaver somniferum HOM05D001356 ORTHO05D008843 1.1e-14 83.6 82 56.1
Rhsim04G0050300 Rhododendron simsii HOM05D001356 ORTHO05D008843 1.8e-14 82.8 72 58.3
ECA234G1829 Erigeron canadensis HOM05D001356 ORTHO05D008843 2.4e-14 82.4 71 60.6
FvH4_3g23060 Fragaria vesca HOM05D001356 ORTHO05D008843 2.0e-13 79.3 51 76.5
CDE04G2305 Ceratophyllum demersum HOM05D001356 ORTHO05D008843 2.6e-13 79.0 66 54.5
HanXRQChr10g0305911 Helianthus annuus HOM05D001356 ORTHO05D008843 2.6e-13 79.0 71 54.9
Cc05_g02940 Coffea canephora HOM05D001356 ORTHO05D008843 4.4e-13 78.2 63 58.7
PGSC0003DMG400000663 Solanum tuberosum HOM05D001356 ORTHO05D008843 4.4e-13 78.2 70 57.1
CAN.G735.1 Capsicum annuum HOM05D001356 ORTHO05D008843 5.8e-13 77.8 70 57.1
Solyc07g049390.3 Solanum lycopersicum HOM05D001356 ORTHO05D008843 5.8e-13 77.8 70 55.7
Sopen07g024730 Solanum pennellii HOM05D001356 ORTHO05D008843 5.8e-13 77.8 70 55.7
Nitab4.5_0000482g0290 Nicotiana tabacum HOM05D001356 ORTHO05D008843 7.6e-13 77.4 71 53.5
Nitab4.5_0005008g0030 Nicotiana tabacum HOM05D001356 ORTHO05D008843 7.6e-13 77.4 71 53.5
Migut.M00424 Erythranthe guttata HOM05D001356 ORTHO05D008843 9.9e-13 77.0 78 53.8
SalBow1G7783 Salvia bowleyana HOM05D001356 ORTHO05D008843 9.9e-13 77.0 72 54.2
SalBow1G8237 Salvia bowleyana HOM05D001356 ORTHO05D008843 9.9e-13 77.0 72 54.2
MSTRG.14860 Avicennia marina HOM05D001356 ORTHO05D008843 2.2e-12 75.9 72 51.4
Migut.H01239 Erythranthe guttata HOM05D001356 ORTHO05D008843 4.9e-12 74.7 71 52.1
Oeu017976.1 Olea europaea HOM05D001356 ORTHO05D008843 4.9e-12 74.7 72 54.2
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 8.4e-12 73.9 73 60.3
MSTRG.14135 Avicennia marina HOM05D001356 ORTHO05D008843 4.2e-11 71.6 71 53.5
SalBow7G4227 Salvia bowleyana HOM05D001356 ORTHO05D008843 4.2e-11 71.6 69 52.2
SGA_v2.0_scaffold70G23388 Striga asiatica HOM05D001356 ORTHO05D008843 2.7e-10 68.9 71 46.5
FAN11G2541 Fragaria x ananassa HOM05D001356 ORTHO05D008843 3.5e-10 68.6 42 81.0
SEGI_04334 Sequoiadendron giganteum HOM05D001356 ORTHO05D008843 3.5e-10 68.6 70 45.7
SGA_v2.0_scaffold34G13759 Striga asiatica HOM05D001356 ORTHO05D008843 3.5e-10 68.6 71 53.5
Sc06g0009660 Simmondsia chinensis HOM05D001356 ORTHO05D008843 6.0e-10 67.8 73 50.7
unitig_26.g9927 Utricularia gibba HOM05D001356 ORTHO05D008843 3.9e-09 65.1 62 48.4
SGA_v2.0_scaffold159G37557 Striga asiatica HOM05D001356 ORTHO05D008843 5.1e-09 64.7 66 47.0
ATR0178G015 Amborella trichopoda HOM05D001356 ORTHO05D008843 8.7e-09 63.9 71 46.5
HPP92_021878 Vanilla planifolia HOM05D001356 ORTHO05D008843 8.7e-09 63.9 71 45.1
C07p09560 Brassica napus HOM05D046181 ORTHO05D030749 3.1e-06 55.5 43 62.8
unitig_52.g17332 Utricularia gibba HOM05D001356 ORTHO05D008843 4.0e-06 55.1 70 37.1


User provided reference genes

Program Settings