Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 2.4e-69 265.4 135 100.0
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 6.6e-67 257.3 135 97.8
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 5.6e-42 174.5 135 71.9
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.2e-33 146.7 135 60.0
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.1e-32 143.7 135 60.0
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.7e-30 136.3 132 59.8
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.7e-30 136.3 132 59.8
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 3.8e-30 135.2 137 62.0
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 1.9e-29 132.9 135 60.7
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 1.2e-28 130.2 138 60.9
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.6e-28 129.8 138 59.4
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.5e-28 128.6 138 60.1
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.5e-28 128.6 138 60.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 3.5e-28 128.6 138 57.2
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 4.6e-28 128.3 145 55.9
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.0e-27 127.1 138 60.1
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 2.3e-27 125.9 146 53.4
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 3.0e-27 125.6 137 59.1
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.1e-26 123.6 147 53.7
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.1e-26 123.6 138 59.4
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.5e-26 122.5 127 55.1
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.6e-25 119.8 127 55.1
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.6e-25 119.8 138 58.0
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.1e-25 119.4 135 52.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 3.6e-25 118.6 134 56.7
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 6.2e-25 117.9 135 54.8
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.1e-25 117.5 131 51.9
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.4e-24 116.7 127 55.1
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.0e-24 115.2 134 50.7
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.2e-23 113.6 147 52.4
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.5e-23 113.2 135 51.9
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 2.6e-23 112.5 127 54.3
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 5.8e-23 111.3 128 53.1
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 5.8e-23 111.3 125 55.2
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 7.6e-23 110.9 127 52.0
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.3e-22 110.2 127 53.5
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.1e-21 107.1 125 51.2
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 1.4e-21 106.7 128 53.1
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 1.9e-21 106.3 113 57.5
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 2.4e-21 105.9 122 55.7
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 2.4e-21 105.9 120 51.7
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 4.2e-21 105.1 135 54.1
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 9.3e-21 104.0 135 54.1
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 5.1e-19 98.2 119 52.9
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 5.1e-19 98.2 136 44.9
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 6.7e-19 97.8 136 47.8
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 4.3e-18 95.1 150 46.0
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.6e-18 94.7 127 48.0
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 9.6e-18 94.0 127 48.0
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 9.6e-18 94.0 139 46.8
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.6e-17 93.2 128 46.9
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.6e-17 92.0 121 49.6
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.6e-17 92.0 121 49.6
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 3.6e-17 92.0 129 46.5
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 3.6e-17 92.0 129 50.4
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 1.1e-16 90.5 127 48.8
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 3.1e-16 89.0 132 48.5
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 4.0e-16 88.6 128 47.7
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 1.2e-15 87.0 146 44.5
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.5e-15 86.7 114 50.0
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 2.0e-15 86.3 131 48.1
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 2.6e-15 85.9 122 49.2
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 3.4e-15 85.5 119 47.9
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 3.4e-15 85.5 130 45.4
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 3.4e-15 85.5 121 48.8
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 3.4e-15 85.5 144 47.9
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 7.6e-15 84.3 119 47.1
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 1.1e-13 80.5 119 47.1
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 1.4e-13 80.1 147 43.5
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 2.4e-13 79.3 135 42.2
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.6e-12 76.6 137 39.4
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 2.1e-12 76.3 145 46.9
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.0e-11 73.9 131 41.2
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 3.0e-11 72.4 128 44.5
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 3.0e-11 72.4 134 39.6
Zm00001eb273730 Zea mays HOM05D007398 ORTHO05D004912 1.1e-10 70.5 142 39.4
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 9.6e-10 67.4 113 41.6
Lj3g0008615 Lotus japonicus HOM05D007398 ORTHO05D004912 1.3e-09 67.0 114 43.9
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.3e-09 67.0 101 46.5
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 1.6e-09 66.6 151 37.1
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 2.1e-09 66.2 139 38.8
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 8.2e-09 64.3 121 39.7
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 3.1e-08 62.4 122 35.2
Zm00001eb070220 Zea mays HOM05D007398 ORTHO05D004912 4.0e-08 62.0 128 40.6
MSTRG.7209 Avicennia marina HOM05D011575 ORTHO05D004912 6.9e-08 61.2 111 43.2
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 6.9e-08 61.2 112 40.2
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 2.0e-07 59.7 113 41.6
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 2.0e-07 59.7 97 44.3
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 2.6e-07 59.3 85 47.1
Zm00001eb431260 Zea mays HOM05D007398 ORTHO05D004912 3.4e-07 58.9 128 35.9
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 4.5e-07 58.5 88 50.0
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 5.8e-07 58.2 89 46.1
Os04g0624701 Oryza sativa ssp. japonica HOM05D007398 ORTHO05D004912 1.3e-06 57.0 129 38.8
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 1.3e-06 57.0 94 42.6
ClCG03G014620 Citrullus lanatus HOM05D032147 ORTHO05D034646 2.9e-06 55.8 117 40.2
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 2.9e-06 55.8 110 40.0
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 2.9e-06 55.8 100 43.0
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 2.9e-06 55.8 96 38.5
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 3.8e-06 55.5 95 37.9
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 4.9e-06 55.1 117 35.9
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 4.9e-06 55.1 99 42.4
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 4.9e-06 55.1 99 42.4
Zm00001eb207520 Zea mays HOM05D067159 ORTHO05D050012 4.9e-06 55.1 114 39.5
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 6.5e-06 54.7 123 39.0


User provided reference genes

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