Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 6.6e-105 384.0 191 100.0
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 5.6e-72 274.6 191 72.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 8.7e-65 250.8 197 66.0
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 4.3e-64 248.4 193 68.4
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.6e-63 246.5 194 68.0
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 1.8e-62 243.0 184 70.7
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 2.0e-61 239.6 186 69.4
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 1.3e-60 236.9 188 67.6
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.7e-60 236.5 191 66.5
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.7e-60 236.5 191 66.5
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.2e-60 236.1 191 67.5
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 6.4e-60 234.6 194 64.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 8.4e-60 234.2 194 64.4
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.1e-59 233.8 188 65.4
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.1e-59 233.8 190 66.8
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.4e-59 233.4 194 63.9
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 4.2e-59 231.9 192 67.2
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 7.1e-59 231.1 191 62.8
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.7e-58 229.2 184 64.1
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 2.7e-58 229.2 137 78.8
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.3e-57 226.9 163 68.1
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 3.0e-57 225.7 200 61.0
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 5.1e-57 224.9 196 61.2
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 5.1e-57 224.9 198 62.6
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 6.7e-57 224.6 163 68.1
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 6.7e-57 224.6 192 63.5
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 6.7e-57 224.6 191 63.4
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.5e-56 223.4 211 59.7
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.5e-56 223.4 153 70.6
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.9e-56 223.0 187 59.4
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 3.3e-56 222.2 169 67.5
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 5.6e-56 221.5 194 61.3
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 5.6e-56 221.5 173 67.1
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 9.6e-56 220.7 184 62.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 9.6e-56 220.7 185 63.2
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.6e-55 219.9 188 60.1
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 3.7e-55 218.8 194 60.8
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 6.2e-55 218.0 177 61.6
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 6.2e-55 218.0 152 69.1
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.2e-55 218.0 195 57.4
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 6.2e-55 218.0 150 71.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.1e-54 217.2 145 70.3
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.4e-54 216.9 188 60.1
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.8e-54 216.5 188 59.6
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.4e-54 216.1 180 60.6
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 3.1e-54 215.7 197 61.9
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 4.0e-54 215.3 196 60.2
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 6.9e-54 214.5 139 68.3
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 9.0e-54 214.2 124 79.0
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.2e-53 213.8 124 79.0
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.2e-53 213.8 141 70.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.2e-53 213.8 165 65.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.2e-53 213.8 124 79.0
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.2e-53 213.8 189 59.3
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.5e-53 213.4 198 57.1
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.0e-53 213.0 168 62.5
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 2.0e-53 213.0 198 58.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 2.6e-53 212.6 150 67.3
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 3.4e-53 212.2 193 60.6
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 4.5e-53 211.8 124 79.8
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 5.8e-53 211.5 186 60.2
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 5.8e-53 211.5 186 60.2
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 5.8e-53 211.5 141 73.0
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 5.8e-53 211.5 197 56.3
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 7.6e-53 211.1 124 79.0
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 7.6e-53 211.1 194 59.8
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.3e-52 210.3 194 59.8
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.3e-52 210.3 194 59.3
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.3e-52 210.3 194 59.3
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.3e-52 210.3 188 56.9
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.7e-52 209.9 193 60.6
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.2e-52 209.5 194 59.3
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 2.9e-52 209.1 197 55.8
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 2.9e-52 209.1 191 55.5
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 6.5e-52 208.0 188 56.4
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.1e-51 207.2 168 64.9
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 3.2e-51 205.7 151 66.9
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 3.2e-51 205.7 194 58.2
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 4.2e-51 205.3 143 68.5
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 7.1e-51 204.5 140 69.3
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 7.1e-51 204.5 166 61.4
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.2e-50 203.8 138 71.0
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 2.7e-50 202.6 191 57.1
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.7e-50 202.6 139 66.9
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.7e-50 202.6 128 71.1
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.7e-50 202.6 128 71.1
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 4.6e-50 201.8 199 54.8
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.3e-49 200.3 167 63.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.3e-49 199.5 167 61.7
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 8.7e-49 197.6 180 58.9
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 8.7e-49 197.6 140 67.1
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 9.6e-48 194.1 127 69.3
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.1e-47 193.0 110 77.3
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 6.3e-47 191.4 110 78.2
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.4e-46 189.5 149 58.4
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 6.9e-46 188.0 147 59.9
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 5.9e-45 184.9 170 61.8
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 7.6e-45 184.5 117 71.8
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.0e-44 184.1 117 73.5
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 3.8e-44 182.2 171 53.8
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 6.5e-44 181.4 142 60.6
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.1e-43 180.6 200 49.0
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 3.2e-43 179.1 191 52.9
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 4.2e-43 178.7 150 65.3
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 9.3e-43 177.6 111 70.3
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 9.3e-43 177.6 141 58.9
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.6e-42 175.6 119 66.4
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.8e-39 166.0 121 66.9
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.1e-38 164.1 114 66.7
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 9.1e-38 161.0 90 78.9
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 2.2e-36 156.4 115 57.4
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 1.1e-35 154.1 131 64.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.9e-35 153.3 138 55.1
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.5e-35 151.8 155 57.4
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.6e-34 150.2 151 55.6
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.6e-34 150.2 151 55.0
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 2.1e-34 149.8 109 65.1
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 2.3e-33 146.4 89 74.2
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.9e-33 145.6 93 71.0
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.7e-31 140.2 94 70.2
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 3.7e-31 139.0 109 59.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.1e-26 123.2 73 75.3
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 3.6e-26 122.5 135 45.9
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 3.9e-25 119.0 114 50.9
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 2.2e-23 113.2 85 64.7
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.2e-20 103.2 93 50.5
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 5.0e-20 102.1 119 52.1
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.9e-19 100.1 111 45.9
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.6e-18 95.9 78 60.3
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.2e-15 86.7 102 49.0
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.1e-14 84.3 179 34.1
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.0e-12 77.8 129 45.0
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.3e-07 60.8 42 61.9
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 3.7e-07 59.3 42 61.9


User provided reference genes

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