Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3083 Acer truncatum HOM05D007836 ORTHO05D009876 6.1e-49 197.2 103 100.0
Ciclev10018116m.g Citrus clementina HOM05D007836 ORTHO05D009876 1.7e-14 82.8 103 57.3
Cfa014529 Carpinus fangiana HOM05D007836 ORTHO05D009876 7.1e-13 77.4 102 51.0
Potri.011G041700 Populus trichocarpa HOM05D007836 ORTHO05D009876 7.8e-12 73.9 99 47.5
Ciclev10017323m.g Citrus clementina HOM05D007836 ORTHO05D009876 1.7e-11 72.8 102 50.0
Sabra04G0019100 Salix brachista HOM05D007836 ORTHO05D009876 1.7e-11 72.8 102 49.0
Potri.004G033300 Populus trichocarpa HOM05D007836 ORTHO05D009876 2.3e-11 72.4 102 48.0
Potri.019G117800 Populus trichocarpa HOM05D007836 ORTHO05D009876 5.1e-11 71.2 102 48.0
QL08p037020 Quercus lobata HOM05D007836 ORTHO05D009876 8.7e-11 70.5 102 49.0
Cfa000343 Carpinus fangiana HOM05D007836 ORTHO05D009876 1.5e-10 69.7 90 51.1
COL.COLO4_13657 Corchorus olitorius HOM05D007836 ORTHO05D009876 1.5e-10 69.7 100 48.0
Nn1g03860 Nelumbo nucifera HOM05D007836 ORTHO05D009876 1.9e-10 69.3 102 47.1
Nn1g03862 Nelumbo nucifera HOM05D007836 ORTHO05D009876 1.9e-10 69.3 102 47.1
Hma1.2p1_1182F.1_g264760 Hydrangea macrophylla HOM05D007836 ORTHO05D009876 2.5e-10 68.9 99 47.5
Sabra11G0028600 Salix brachista HOM05D007836 ORTHO05D009876 2.5e-10 68.9 100 43.0
Rhsim02G0119100 Rhododendron simsii HOM05D007836 ORTHO05D009876 4.3e-10 68.2 92 48.9
CiPaw.10G117600 Carya illinoinensis HOM05D007836 ORTHO05D009876 5.6e-10 67.8 102 45.1
COL.COLO4_31599 Corchorus olitorius HOM05D007836 ORTHO05D009876 7.3e-10 67.4 102 44.1
CiPaw.03G168400 Carya illinoinensis HOM05D007836 ORTHO05D009876 9.6e-10 67.0 98 49.0
Haze_06588 Corylus avellana HOM05D007836 ORTHO05D009876 1.3e-09 66.6 88 48.9
TAR629G2038 Trochodendron aralioides HOM05D007836 ORTHO05D009876 1.3e-09 66.6 104 45.2
QL05p081073 Quercus lobata HOM05D007836 ORTHO05D009876 1.6e-09 66.2 98 45.9
Migut.M01222 Erythranthe guttata HOM05D007836 ORTHO05D009876 8.1e-09 63.9 99 47.5
Nitab4.5_0000649g0060 Nicotiana tabacum HOM05D007836 ORTHO05D009876 1.4e-08 63.2 86 46.5
Potri.013G148300 Populus trichocarpa HOM05D007836 ORTHO05D009876 4.0e-08 61.6 102 46.1
TWI38G1692 Tripterygium wilfordii HOM05D007836 ORTHO05D009876 4.0e-08 61.6 93 47.3
Manes.16G019800 Manihot esculenta HOM05D007836 ORTHO05D009876 6.9e-08 60.8 101 44.6
Manes.13G152300 Manihot esculenta HOM05D007836 ORTHO05D009876 1.2e-07 60.1 100 44.0
Sabra19G0118200 Salix brachista HOM05D007836 ORTHO05D009876 1.2e-07 60.1 104 44.2
Thecc.02G170500 Theobroma cacao HOM05D007836 ORTHO05D009876 2.0e-07 59.3 98 48.0
TPR.G36842 Trifolium pratense HOM05D007836 ORTHO05D009876 2.0e-07 59.3 104 42.3
Glyma.13G247000 Glycine max HOM05D007836 ORTHO05D009876 3.4e-07 58.5 102 41.2
Thhalv10009208m.g Eutrema salsugineum HOM05D000831 ORTHO05D000660 4.5e-07 58.2 68 52.9
FAN11G3258 Fragaria x ananassa HOM05D007836 ORTHO05D009876 7.6e-07 57.4 106 40.6
Gohir.D06G127700 Gossypium hirsutum HOM05D007836 ORTHO05D009876 9.9e-07 57.0 67 53.7
Gorai.010G149400 Gossypium raimondii HOM05D007836 ORTHO05D009876 9.9e-07 57.0 67 53.7
Ca_00250_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 1.3e-06 56.6 103 41.7
Ca_29769_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 1.3e-06 56.6 103 41.7
Ca_29839_v3 Cicer arietinum L. HOM05D007836 ORTHO05D009876 1.3e-06 56.6 103 41.7
Medtr2g011690 Medicago truncatula HOM05D007836 ORTHO05D009876 1.7e-06 56.2 102 42.2
Prupe.4G035300 Prunus persica HOM05D007836 ORTHO05D009876 1.7e-06 56.2 102 39.2
Thecc.06G201100 Theobroma cacao HOM05D007836 ORTHO05D009876 1.7e-06 56.2 104 38.5
Carub.0001s3183 Capsella rubella HOM05D000831 ORTHO05D000660 2.2e-06 55.8 68 51.5
Nitab4.5_0005389g0040 Nicotiana tabacum HOM05D007836 ORTHO05D009876 2.2e-06 55.8 86 41.9
Gohir.A13G057150 Gossypium hirsutum HOM05D007836 ORTHO05D009876 2.9e-06 55.5 55 54.5
Gohir.D13G064750 Gossypium hirsutum HOM05D007836 ORTHO05D009876 2.9e-06 55.5 55 54.5
Gorai.013G073500 Gossypium raimondii HOM05D007836 ORTHO05D009876 2.9e-06 55.5 55 54.5
Aa31LG6G7850 Aethionema arabicum HOM05D000831 ORTHO05D000660 3.8e-06 55.1 49 59.2
Gohir.A10G021700 Gossypium hirsutum HOM05D007836 ORTHO05D009876 4.9e-06 54.7 101 37.6
MBI18_g27690_MAGBIO Magnolia biondii HOM05D007836 ORTHO05D009876 4.9e-06 54.7 102 43.1
Solyc02g079240.1 Solanum lycopersicum HOM05D007836 ORTHO05D009876 6.4e-06 54.3 88 39.8
Gohir.A04G106066 Gossypium hirsutum HOM05D007836 ORTHO05D009876 8.4e-06 53.9 103 39.8


User provided reference genes

Program Settings