Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 3.0e-83 312.0 179 100.0
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 2.6e-55 219.2 179 69.3
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.6e-55 219.2 182 74.7
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 3.8e-54 215.3 181 70.2
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.5e-54 214.5 179 67.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 6.5e-54 214.5 181 70.7
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.5e-53 212.6 181 72.4
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 4.2e-53 211.8 180 67.8
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 9.3e-53 210.7 182 66.5
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 1.2e-52 210.3 179 68.2
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 2.1e-52 209.5 181 70.2
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 4.6e-52 208.4 179 67.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.3e-51 206.8 182 67.0
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.3e-51 206.8 181 66.9
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.3e-51 206.8 186 64.0
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.3e-51 206.8 181 66.9
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.3e-51 206.8 186 66.1
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 2.3e-51 206.1 181 68.0
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.3e-51 206.1 183 67.8
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 3.9e-51 205.3 182 70.9
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 6.7e-51 204.5 179 67.0
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 8.7e-51 204.1 181 66.9
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.9e-50 203.0 182 65.9
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 4.3e-50 201.8 179 64.8
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 5.7e-50 201.4 186 62.9
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.4e-50 201.1 185 66.5
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 9.7e-50 200.7 179 65.4
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.3e-49 200.3 188 63.3
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.8e-49 199.1 183 68.3
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.8e-49 199.1 182 64.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 3.7e-49 198.7 186 65.6
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.8e-49 198.4 183 69.9
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.8e-49 198.4 183 69.9
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 4.8e-49 198.4 183 62.8
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 4.8e-49 198.4 181 62.4
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 4.8e-49 198.4 181 62.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 8.2e-49 197.6 182 63.7
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.2e-49 197.6 182 63.7
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.1e-48 197.2 181 69.1
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.8e-48 196.4 182 67.0
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.4e-48 196.1 182 67.0
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.4e-48 196.1 178 66.9
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 2.4e-48 196.1 179 68.7
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.1e-48 195.7 179 69.3
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 3.1e-48 195.7 182 69.8
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 4.1e-48 195.3 184 63.6
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.3e-48 194.9 185 67.0
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 5.3e-48 194.9 179 69.8
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 5.3e-48 194.9 180 63.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.5e-47 193.4 179 68.7
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 2.0e-47 193.0 187 62.6
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.0e-47 193.0 183 66.1
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 2.6e-47 192.6 184 65.2
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.6e-47 192.6 180 66.1
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.6e-47 192.6 138 75.4
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.4e-47 192.2 187 62.6
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.4e-47 192.2 187 62.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 3.4e-47 192.2 189 61.4
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.5e-47 191.8 181 69.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 5.9e-47 191.4 138 75.4
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 5.9e-47 191.4 181 69.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 7.7e-47 191.0 181 63.0
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.0e-46 190.7 180 63.3
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.0e-46 190.7 180 65.6
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.3e-46 190.3 180 67.8
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.2e-46 189.5 184 62.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 3.8e-46 188.7 183 63.4
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 3.8e-46 188.7 188 60.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 5.0e-46 188.3 179 66.5
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 6.5e-46 188.0 181 60.2
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 8.5e-46 187.6 179 60.9
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 8.5e-46 187.6 188 61.7
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 8.5e-46 187.6 180 64.4
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.1e-45 187.2 184 60.9
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.4e-45 186.8 183 61.2
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.4e-45 186.8 184 63.6
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.9e-45 186.4 187 62.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.9e-45 186.4 181 60.8
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.2e-45 185.7 181 61.9
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.2e-45 185.7 138 73.2
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 4.2e-45 185.3 185 61.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 4.2e-45 185.3 185 61.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 4.2e-45 185.3 182 59.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 4.2e-45 185.3 186 60.8
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 5.5e-45 184.9 184 61.4
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 5.5e-45 184.9 183 61.7
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 7.2e-45 184.5 182 63.2
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 9.4e-45 184.1 184 60.3
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.6e-44 183.3 182 63.7
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.6e-44 183.3 181 62.4
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 2.1e-44 183.0 180 59.4
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.7e-44 182.6 184 60.3
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 3.6e-44 182.2 181 61.9
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 4.6e-44 181.8 177 66.7
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 6.1e-44 181.4 123 78.0
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 6.1e-44 181.4 181 61.9
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 7.9e-44 181.0 180 59.4
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 7.9e-44 181.0 180 66.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.3e-43 179.5 116 79.3
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.3e-43 179.5 141 70.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 3.0e-43 179.1 186 57.5
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 5.1e-43 178.3 179 66.5
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 6.7e-43 177.9 131 73.3
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 8.8e-43 177.6 103 88.3
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.1e-42 177.2 185 60.5
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.1e-42 177.2 110 81.8
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 9.7e-42 174.1 182 61.5
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 1.7e-41 173.3 183 59.0
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.7e-41 173.3 181 60.8
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 4.8e-41 171.8 105 82.9
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 8.2e-41 171.0 168 61.3
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.4e-40 170.2 105 81.9
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 3.1e-40 169.1 105 79.0
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 1.5e-39 166.8 166 58.4
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 6.1e-36 154.8 110 70.9
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.8e-35 153.3 85 90.6
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.1e-32 144.1 134 56.0
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 7.0e-32 141.4 110 61.8
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.7e-30 136.7 112 58.0
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.2e-29 132.1 149 58.4
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 6.1e-28 128.3 104 58.7
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 4.4e-26 122.1 120 53.3
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.0e-23 113.2 147 47.6
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.8e-22 109.0 134 52.2
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 8.5e-22 107.8 107 50.5
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 6.1e-20 101.7 146 41.1
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.4e-16 89.7 142 47.2
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 3.2e-13 79.3 170 46.5


User provided reference genes

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