Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.5e-228 795.8 390 100.0
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 4.7e-174 614.8 392 75.5
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 3.1e-162 575.5 395 72.7
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 2.0e-161 572.8 382 70.9
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 2.0e-161 572.8 390 71.5
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.0e-160 570.5 366 75.1
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.1e-159 567.0 388 70.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.9e-159 566.2 388 70.4
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.5e-159 565.8 388 69.6
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 2.5e-159 565.8 379 71.8
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 2.8e-158 562.4 353 75.4
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 1.8e-157 559.7 382 70.9
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.5e-156 556.6 376 71.3
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.0e-156 556.2 382 70.9
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 9.8e-156 553.9 388 69.3
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 8.3e-155 550.8 383 70.8
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 5.4e-154 548.1 371 70.6
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 4.6e-153 545.0 394 68.3
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 4.6e-153 545.0 421 64.1
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 1.3e-152 543.5 391 69.6
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 1.3e-152 543.5 387 69.3
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.7e-152 543.1 379 70.2
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 1.7e-152 543.1 410 65.4
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 1.2e-150 537.0 345 73.6
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.2e-150 537.0 373 70.2
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.8e-150 535.8 341 73.3
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 8.9e-149 530.8 385 69.4
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.3e-147 526.9 393 66.7
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 2.9e-147 525.8 358 70.9
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 4.9e-147 525.0 383 66.3
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.0e-145 519.6 373 69.4
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.0e-145 519.6 359 71.3
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.7e-145 519.2 376 68.1
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 3.5e-145 518.8 373 68.1
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.7e-144 516.5 383 67.1
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.7e-144 516.5 385 67.0
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.7e-144 516.5 383 67.1
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.3e-144 516.2 383 67.1
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 2.3e-144 516.2 382 67.5
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 3.9e-144 515.4 358 68.7
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 6.6e-144 514.6 378 65.6
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 8.6e-144 514.2 383 66.8
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.1e-143 513.8 336 72.6
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.9e-143 513.1 386 66.6
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.5e-143 512.7 326 74.2
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 5.6e-143 511.5 355 70.4
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 5.6e-143 511.5 349 69.6
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 1.2e-142 510.4 388 65.5
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.2e-142 510.4 377 64.5
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 2.8e-142 509.2 394 64.7
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.8e-141 506.5 386 64.8
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.8e-141 506.5 350 68.6
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 3.1e-141 505.8 389 66.1
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 1.2e-140 503.8 346 70.2
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.3e-139 500.4 378 66.1
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 1.3e-139 500.4 389 64.3
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.1e-138 497.3 333 72.1
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 4.1e-138 495.4 383 64.2
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 5.4e-138 495.0 325 71.4
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 9.2e-138 494.2 365 63.8
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.6e-137 493.4 332 69.3
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 3.0e-136 489.2 342 67.8
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 2.5e-135 486.1 326 70.9
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 3.3e-135 485.7 330 68.5
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 1.2e-134 483.8 353 64.9
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 1.4e-133 480.3 370 63.2
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.8e-133 479.9 391 60.4
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 2.6e-132 476.1 394 60.2
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.3e-131 473.8 358 63.7
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 6.4e-131 471.5 351 65.0
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 8.4e-131 471.1 316 71.2
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.1e-130 470.7 345 65.5
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 3.3e-127 459.1 357 64.1
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 4.7e-126 455.3 327 69.4
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 2.4e-125 453.0 388 59.3
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.1e-125 452.6 343 63.6
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 5.2e-125 451.8 339 64.3
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 5.8e-124 448.4 417 55.9
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 5.4e-122 441.8 330 62.4
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 3.3e-119 432.6 543 47.5
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 7.3e-119 431.4 383 59.3
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.6e-118 430.3 339 61.1
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 1.2e-116 424.1 388 58.0
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 2.9e-115 419.5 344 61.6
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 6.4e-115 418.3 376 58.8
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 4.6e-113 412.1 288 68.4
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.0e-112 411.0 332 62.0
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.4e-109 400.6 241 75.1
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.6e-108 396.4 262 69.1
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 7.6e-108 394.8 276 65.9
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.1e-104 382.1 363 55.4
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 9.6e-103 377.9 287 65.5
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 3.5e-97 359.4 277 62.8
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 3.5e-89 332.8 322 50.0
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.1e-89 332.0 386 48.2
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.7e-87 325.5 262 58.4
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.1e-85 321.2 325 48.9
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 3.0e-80 303.1 406 43.3
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.7e-75 287.3 174 75.3
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.0e-72 278.1 330 42.4
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 7.0e-69 265.4 168 70.2
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 6.8e-56 222.2 351 37.9
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.2e-39 168.3 101 81.2
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 5.4e-37 159.5 139 55.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.8e-31 139.4 78 79.5
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 3.2e-29 133.7 101 65.3
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.8e-20 102.4 75 69.3
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 6.8e-16 89.4 97 48.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 5.4e-13 79.7 59 69.5
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.6e-12 76.6 68 50.0
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 4.7e-09 66.6 105 39.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.2e-09 66.2 39 74.4
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 3.8e-06 57.0 47 48.9


User provided reference genes

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