Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.30 Acer truncatum HOM05D000457 ORTHO05D000560 6.1e-77 290.8 153 100.0
Manes.06G016725 Manihot esculenta HOM05D000457 ORTHO05D000560 1.9e-30 136.3 147 54.4
Manes.06G016800 Manihot esculenta HOM05D000457 ORTHO05D000560 5.6e-30 134.8 147 53.7
Dinv30977 Davidia involucrata HOM05D000457 ORTHO05D000560 2.3e-28 129.4 140 52.9
CiPaw.12G009700 Carya illinoinensis HOM05D000457 ORTHO05D000560 5.2e-28 128.3 149 50.3
QL02p104109 Quercus lobata HOM05D000457 ORTHO05D000560 8.9e-28 127.5 149 48.3
TWI59G1411 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 2.0e-27 126.3 149 49.0
Cfa004411 Carpinus fangiana HOM05D000457 ORTHO05D000560 2.2e-26 122.9 149 51.0
Rhsim10G0099300 Rhododendron simsii HOM05D000457 ORTHO05D000560 2.2e-26 122.9 145 49.7
TAR626G0432 Trochodendron aralioides HOM05D000457 ORTHO05D000560 2.9e-26 122.5 144 48.6
Ciclev10000235m.g Citrus clementina HOM05D000457 ORTHO05D000560 3.7e-26 122.1 141 51.1
Lj5A309T28 Lonicera japonica HOM05D000457 ORTHO05D000560 6.4e-26 121.3 149 49.0
vmacro19811 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 1.1e-25 120.6 148 46.6
THA.LOC104800318 Tarenaya hassleriana HOM05D000457 ORTHO05D000560 2.4e-25 119.4 139 50.4
Prupe.1G587800 Prunus persica HOM05D000457 ORTHO05D000560 5.4e-25 118.2 149 49.0
CSS0014734 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D000560 1.2e-24 117.1 139 53.2
GSVIVG01023105001 Vitis vinifera HOM05D000457 ORTHO05D000560 1.6e-24 116.7 147 49.0
Duzib114G0620 Durio zibethinus HOM05D000457 ORTHO05D000560 2.0e-24 116.3 138 50.0
Atru.chr6.28 Acer truncatum HOM05D000457 ORTHO05D000560 2.7e-24 115.9 141 51.1
Cfa005110 Carpinus fangiana HOM05D000457 ORTHO05D000560 2.7e-24 115.9 146 49.3
Gorai.011G242100 Gossypium raimondii HOM05D000457 ORTHO05D000560 2.7e-24 115.9 145 49.0
HanXRQChr14g0440361 Helianthus annuus HOM05D000457 ORTHO05D000560 2.7e-24 115.9 146 43.2
Rhsim05G0110400 Rhododendron simsii HOM05D000457 ORTHO05D000560 2.7e-24 115.9 145 49.7
Sabra01G0056600 Salix brachista HOM05D000457 ORTHO05D000560 4.6e-24 115.2 145 49.0
Cfa005551 Carpinus fangiana HOM05D000457 ORTHO05D000560 6.0e-24 114.8 146 48.6
Lalb_Chr20g0119821 Lupinus albus HOM05D000457 ORTHO05D000560 6.0e-24 114.8 130 52.3
COL.COLO4_06788 Corchorus olitorius HOM05D000457 ORTHO05D000560 7.8e-24 114.4 140 50.7
Gohir.D10G216500 Gossypium hirsutum HOM05D000457 ORTHO05D000560 7.8e-24 114.4 138 50.7
Lsat_1_v5_gn_9_81901 Lactuca sativa HOM05D000457 ORTHO05D000560 1.3e-23 113.6 149 45.0
MD08G1250800 Malus domestica HOM05D000457 ORTHO05D000560 1.3e-23 113.6 149 48.3
COL.COLO4_06789 Corchorus olitorius HOM05D000457 ORTHO05D000560 1.7e-23 113.2 140 50.0
FAN13G2432 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.7e-23 113.2 149 48.3
Thecc.10G064400 Theobroma cacao HOM05D000457 ORTHO05D000560 1.7e-23 113.2 148 44.6
FvH4_5g27150 Fragaria vesca HOM05D000457 ORTHO05D000560 3.0e-23 112.5 149 48.3
FAN08G0526 Fragaria x ananassa HOM05D000457 ORTHO05D000560 3.0e-23 112.5 149 48.3
TWI59G0951 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 3.0e-23 112.5 145 50.3
Gohir.A10G208200 Gossypium hirsutum HOM05D000457 ORTHO05D000560 3.9e-23 112.1 138 49.3
Cfa004735 Carpinus fangiana HOM05D000457 ORTHO05D000560 5.0e-23 111.7 147 51.7
Dinv24541 Davidia involucrata HOM05D000457 ORTHO05D000560 5.0e-23 111.7 139 47.5
Eucgr.I01139 Eucalyptus grandis HOM05D000457 ORTHO05D000560 5.0e-23 111.7 149 44.3
Potri.001G079000 Populus trichocarpa HOM05D000457 ORTHO05D000560 5.0e-23 111.7 145 48.3
QL02p103996 Quercus lobata HOM05D000457 ORTHO05D000560 5.0e-23 111.7 151 47.0
Cc02_g36770 Coffea canephora HOM05D000457 ORTHO05D000560 8.6e-23 110.9 134 49.3
Aa31sc75G60 Aethionema arabicum HOM05D000457 ORTHO05D000560 1.1e-22 110.5 140 47.1
Haze_09946 Corylus avellana HOM05D000457 ORTHO05D000560 1.1e-22 110.5 134 48.5
PSO017G6043 Papaver somniferum HOM05D000457 ORTHO05D000560 1.9e-22 109.8 135 49.6
FAN18G0649 Fragaria x ananassa HOM05D000457 ORTHO05D000560 2.5e-22 109.4 149 47.0
Actinidia01649 Actinidia chinensis HOM05D000457 ORTHO05D000560 5.6e-22 108.2 147 47.6
CANSAT01G0014 Cannabis sativa HOM05D000457 ORTHO05D000560 5.6e-22 108.2 141 46.8
MD15G1140500 Malus domestica HOM05D000457 ORTHO05D000560 5.6e-22 108.2 136 47.8
BcaC04g20829 Brassica carinata HOM05D000457 ORTHO05D000560 7.3e-22 107.8 140 48.6
C09p38720 Brassica napus HOM05D000457 ORTHO05D000560 7.3e-22 107.8 140 48.6
BolC9t56727H Brassica oleracea HOM05D000457 ORTHO05D000560 7.3e-22 107.8 140 48.6
CiPaw.05G000200 Carya illinoinensis HOM05D000457 ORTHO05D000560 7.3e-22 107.8 150 46.7
CiPaw.05G000100 Carya illinoinensis HOM05D000457 ORTHO05D000560 1.2e-21 107.1 150 46.7
Sp6g11000 Schrenkiella parvula HOM05D000457 ORTHO05D000560 1.2e-21 107.1 140 47.9
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 1.6e-21 106.7 133 48.1
BcaB08g35344 Brassica carinata HOM05D000457 ORTHO05D000560 2.1e-21 106.3 140 47.9
Thhalv10012839m.g Eutrema salsugineum HOM05D000457 ORTHO05D000560 2.1e-21 106.3 140 45.7
Dinv24542 Davidia involucrata HOM05D000457 ORTHO05D000560 2.8e-21 105.9 139 46.8
BraSC37t46130Z Brassica rapa HOM05D000457 ORTHO05D000560 3.6e-21 105.5 140 47.1
AL8G23670 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 4.7e-21 105.1 140 47.1
Carub.0008s0961 Capsella rubella HOM05D000457 ORTHO05D000560 4.7e-21 105.1 149 45.6
PSO170G2371 Papaver somniferum HOM05D000457 ORTHO05D000560 4.7e-21 105.1 135 51.1
A10p08720 Brassica napus HOM05D000457 ORTHO05D000560 6.2e-21 104.8 140 47.1
Cpa.g.sc17.26 Carica papaya HOM05D000457 ORTHO05D000560 6.2e-21 104.8 139 50.4
Oeu016664.1 Olea europaea HOM05D000457 ORTHO05D000560 6.2e-21 104.8 139 45.3
Eucgr.I01143 Eucalyptus grandis HOM05D000457 ORTHO05D000560 1.4e-20 103.6 149 43.0
AT5G49740 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 1.8e-20 103.2 140 46.4
Cfa004410 Carpinus fangiana HOM05D000457 ORTHO05D000560 2.3e-20 102.8 138 45.7
RcHm_v2.0_Chr7g0218171 Rosa chinensis HOM05D000457 ORTHO05D000560 2.3e-20 102.8 145 45.5
PGR142G2765 Punica granatum HOM05D000457 ORTHO05D000560 3.1e-20 102.4 144 47.9
Medtr2g028530 Medicago truncatula HOM05D000457 ORTHO05D000560 4.0e-20 102.1 137 46.0
AUR62032510 Chenopodium quinoa HOM05D000457 ORTHO05D000560 5.2e-20 101.7 150 42.0
DCAR_022318 Daucus carota HOM05D000457 ORTHO05D000560 1.2e-19 100.5 130 44.6
QL10p023888 Quercus lobata HOM05D000457 ORTHO05D000560 1.2e-19 100.5 131 44.3
Nitab4.5_0004176g0050 Nicotiana tabacum HOM05D000457 ORTHO05D000560 2.6e-19 99.4 136 43.4
vmacro19809 Vaccinium macrocarpon HOM05D000457 ORTHO05D000560 3.4e-19 99.0 128 47.7
CARHR259040 Cardamine hirsuta HOM05D000457 ORTHO05D000560 4.4e-19 98.6 139 43.2
ECA240G2196 Erigeron canadensis HOM05D000457 ORTHO05D000560 4.4e-19 98.6 131 43.5
Nitab4.5_0004176g0030 Nicotiana tabacum HOM05D000457 ORTHO05D000560 4.4e-19 98.6 139 43.2
Ca_11365_v3 Cicer arietinum L. HOM05D000457 ORTHO05D000560 5.8e-19 98.2 137 43.8
MBI03_g28959_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 5.8e-19 98.2 134 42.5
Nitab4.5_0004090g0120 Nicotiana tabacum HOM05D000457 ORTHO05D000560 5.8e-19 98.2 139 43.9
Sabra01G0056400 Salix brachista HOM05D000457 ORTHO05D000560 9.8e-19 97.4 105 57.1
Aqoxy6G00006 Aquilegia oxysepala HOM05D000457 ORTHO05D000560 1.3e-18 97.1 145 40.0
EL10Ac6g13935 Beta vulgaris HOM05D000457 ORTHO05D000560 1.3e-18 97.1 150 40.7
DCAR_001876 Daucus carota HOM05D000457 ORTHO05D000560 1.3e-18 97.1 135 42.2
Glyma.15G124700 Glycine max HOM05D000457 ORTHO05D000560 1.7e-18 96.7 142 41.5
Zm00001eb081810 Zea mays HOM05D000457 ORTHO05D000560 1.7e-18 96.7 150 42.7
CDE02G3687 Ceratophyllum demersum HOM05D000457 ORTHO05D000560 2.2e-18 96.3 149 38.3
AL8G23660 Arabidopsis lyrata HOM05D000457 ORTHO05D000560 2.9e-18 95.9 141 46.8
MSTRG.20345 Avicennia marina HOM05D000457 ORTHO05D000560 2.9e-18 95.9 149 36.9
ClCG10G007690 Citrullus lanatus HOM05D000457 ORTHO05D000560 3.7e-18 95.5 136 44.1
ECA236G4330 Erigeron canadensis HOM05D000457 ORTHO05D000560 3.7e-18 95.5 146 41.1
PGR142G2562 Punica granatum HOM05D000457 ORTHO05D000560 3.7e-18 95.5 137 43.8
FvH4_5g27140 Fragaria vesca HOM05D000457 ORTHO05D000560 1.1e-17 94.0 150 42.7
FAN18G2270 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.1e-17 94.0 150 42.7
Peaxi162Scf00194g00728 Petunia axillaris HOM05D000457 ORTHO05D000560 1.1e-17 94.0 152 39.5
arahy.Tifrunner.gnm1.ann1.ALC201 Arachis hypogaea HOM05D000457 ORTHO05D000560 1.4e-17 93.6 136 43.4
FAN08G2989 Fragaria x ananassa HOM05D000457 ORTHO05D000560 1.4e-17 93.6 150 42.7
HanXRQChr00c0020g0571101 Helianthus annuus HOM05D000457 ORTHO05D000560 1.4e-17 93.6 131 43.5
PGR102G1669 Punica granatum HOM05D000457 ORTHO05D000560 1.9e-17 93.2 149 40.3
Sed0027163 Sechium edule HOM05D000457 ORTHO05D000560 3.2e-17 92.4 145 42.1
PGSC0003DMG401018223 Solanum tuberosum HOM05D000457 ORTHO05D000560 3.2e-17 92.4 144 40.3
Glyma.09G018600 Glycine max HOM05D000457 ORTHO05D000560 4.1e-17 92.0 140 39.3
Rhsim05G0110600 Rhododendron simsii HOM05D000457 ORTHO05D000560 4.1e-17 92.0 192 37.0
Hund23749 Selenicereus undatus HOM05D000457 ORTHO05D000560 4.1e-17 92.0 141 41.8
Solyc01g102610.3 Solanum lycopersicum HOM05D000457 ORTHO05D000560 4.1e-17 92.0 139 41.7
VMungo0540G0366 Vigna mungo HOM05D000457 ORTHO05D000560 4.1e-17 92.0 142 41.5
Migut.B00686 Erythranthe guttata HOM05D000457 ORTHO05D000560 5.4e-17 91.7 149 38.9
FAN13G3293 Fragaria x ananassa HOM05D000457 ORTHO05D000560 5.4e-17 91.7 150 42.0
Sopen01g045020 Solanum pennellii HOM05D000457 ORTHO05D000560 7.1e-17 91.3 134 41.8
Os04g0444800 Oryza sativa ssp. japonica HOM05D000457 ORTHO05D000560 9.2e-17 90.9 142 39.4
Lj6g0019314 Lotus japonicus HOM05D000457 ORTHO05D000560 1.2e-16 90.5 137 41.6
PGR142G1709 Punica granatum HOM05D000457 ORTHO05D000560 1.2e-16 90.5 140 44.3
Psat1g170720 Pisum sativum HOM05D000457 ORTHO05D000560 1.6e-16 90.1 137 41.6
SGA_v2.0_scaffold254G45213 Striga asiatica HOM05D000457 ORTHO05D000560 1.6e-16 90.1 143 39.2
Eucgr.I01144 Eucalyptus grandis HOM05D000457 ORTHO05D000560 2.1e-16 89.7 114 45.6
PGR142G3572 Punica granatum HOM05D000457 ORTHO05D000560 2.1e-16 89.7 152 44.1
AT5G49730 Arabidopsis thaliana HOM05D000457 ORTHO05D000560 2.7e-16 89.4 141 44.0
Cc06_g21050 Coffea canephora HOM05D000457 ORTHO05D000560 2.7e-16 89.4 107 50.5
Peaxi162Scf00194g00817 Petunia axillaris HOM05D000457 ORTHO05D000560 3.5e-16 89.0 152 40.8
RcHm_v2.0_Chr7g0218161 Rosa chinensis HOM05D000457 ORTHO05D000560 3.5e-16 89.0 162 38.3
arahy.Tifrunner.gnm1.ann1.HUI7W7 Arachis hypogaea HOM05D000457 ORTHO05D000560 4.6e-16 88.6 120 44.2
QL02p104068 Quercus lobata HOM05D000457 ORTHO05D000560 4.6e-16 88.6 133 44.4
CAN.G1379.26 Capsicum annuum HOM05D000457 ORTHO05D000560 7.8e-16 87.8 135 39.3
MELO3C016426.2 Cucumis melo HOM05D000457 ORTHO05D000560 7.8e-16 87.8 136 41.9
Phvul.006G133600 Phaseolus vulgaris HOM05D000457 ORTHO05D000560 1.0e-15 87.4 145 37.9
ATR1089G123 Amborella trichopoda HOM05D000457 ORTHO05D000560 6.6e-15 84.7 149 35.6
Eucgr.I01142 Eucalyptus grandis HOM05D000457 ORTHO05D000560 6.6e-15 84.7 142 40.8
RcHm_v2.0_Chr7g0218141 Rosa chinensis HOM05D000457 ORTHO05D000560 6.6e-15 84.7 141 39.7
Peaxi162Scf00071g00030 Petunia axillaris HOM05D000457 ORTHO05D000560 3.3e-14 82.4 111 45.0
QL04p018484 Quercus lobata HOM05D000457 ORTHO05D000560 4.3e-14 82.0 96 51.0
HPP92_011444 Vanilla planifolia HOM05D000457 ORTHO05D000560 5.6e-14 81.6 123 39.0
AUR62042817 Chenopodium quinoa HOM05D000457 ORTHO05D000560 7.3e-14 81.3 130 37.7
Eucgr.B03992 Eucalyptus grandis HOM05D000457 ORTHO05D000560 6.2e-13 78.2 124 38.7
Cfa004732 Carpinus fangiana HOM05D000457 ORTHO05D000560 1.1e-12 77.4 110 48.2
CsaV3_3G006820 Cucumis sativus L. HOM05D000457 ORTHO05D000560 1.8e-12 76.6 136 40.4
MBI19_g20764_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 1.8e-12 76.6 134 38.8
SEGI_39283 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 2.3e-12 76.3 141 38.3
CDE08G0417 Ceratophyllum demersum HOM05D000457 ORTHO05D000560 2.6e-11 72.8 149 35.6
Sc03g0005550 Simmondsia chinensis HOM05D000457 ORTHO05D000560 1.3e-10 70.5 55 60.0
SEGI_31396 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 2.9e-10 69.3 131 34.4
HPP92_022488 Vanilla planifolia HOM05D000457 ORTHO05D000560 4.1e-09 65.5 128 36.7
Lalb_Chr17g0339251 Lupinus albus HOM05D000457 ORTHO05D000560 7.1e-09 64.7 129 34.9
Lalb_Chr17g0339321 Lupinus albus HOM05D000457 ORTHO05D000560 7.1e-09 64.7 129 34.9
Lalb_Chr17g0339341 Lupinus albus HOM05D000457 ORTHO05D000560 7.1e-09 64.7 129 34.9
SEGI_11146 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 7.1e-09 64.7 113 36.3
Lalb_Chr17g0339271 Lupinus albus HOM05D000457 ORTHO05D000560 9.2e-09 64.3 129 36.4
Lsat_1_v5_gn_7_54801 Lactuca sativa HOM05D000457 ORTHO05D000560 4.6e-08 62.0 139 36.0
SEGI_01803 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 4.6e-08 62.0 146 28.8
HPP92_021015 Vanilla planifolia HOM05D000457 ORTHO05D000560 4.6e-08 62.0 131 38.2
CAN.G532.79 Capsicum annuum HOM05D003257 ORTHO05D003749 6.0e-08 61.6 53 50.9
Medtr8g028795 Medicago truncatula HOM05D000457 ORTHO05D000560 6.0e-08 61.6 149 30.2
CANSAT21G0389 Cannabis sativa HOM05D000457 ORTHO05D000560 7.8e-08 61.2 133 32.3
Glyma.18G235900 Glycine max HOM05D000457 ORTHO05D000560 1.3e-07 60.5 131 34.4
Lj3g0010852 Lotus japonicus HOM05D000457 ORTHO05D000560 1.7e-07 60.1 128 34.4
SEGI_29329 Sequoiadendron giganteum HOM05D000457 ORTHO05D000560 2.3e-07 59.7 105 36.2
Nitab4.5_0012023g0010 Nicotiana tabacum HOM05D000457 ORTHO05D000560 3.0e-07 59.3 50 56.0
TPR.G23244 Trifolium pratense HOM05D000457 ORTHO05D000560 3.0e-07 59.3 60 51.7
QL04p018402 Quercus lobata HOM05D000457 ORTHO05D000560 6.6e-07 58.2 144 33.3
TPR.G17487 Trifolium pratense HOM05D000457 ORTHO05D000560 6.6e-07 58.2 59 50.8
TWI59G0528 Tripterygium wilfordii HOM05D000457 ORTHO05D000560 6.6e-07 58.2 124 33.1
TAR629G1742 Trochodendron aralioides HOM05D000457 ORTHO05D000560 6.6e-07 58.2 132 31.8
arahy.Tifrunner.gnm1.ann1.HAEB4P Arachis hypogaea HOM05D000457 ORTHO05D000560 1.1e-06 57.4 129 31.0
arahy.Tifrunner.gnm1.ann1.SV1BLK Arachis hypogaea HOM05D000457 ORTHO05D000560 1.1e-06 57.4 129 31.0
MBI04_g39567_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D000560 1.5e-06 57.0 130 31.5
TAR365G0667 Trochodendron aralioides HOM05D000457 ORTHO05D000560 1.5e-06 57.0 133 29.3
Lalb_Chr07g0184151 Lupinus albus HOM05D000457 ORTHO05D000560 1.9e-06 56.6 137 30.7
Manes.01G254300 Manihot esculenta HOM05D000457 ORTHO05D000560 1.9e-06 56.6 129 27.1
SalBow4G0942 Salvia bowleyana HOM05D000457 ORTHO05D000560 2.5e-06 56.2 129 31.8
CDE02G4626 Ceratophyllum demersum HOM05D000457 ORTHO05D000560 3.3e-06 55.8 112 33.9
Nn5g28502 Nelumbo nucifera HOM05D000457 ORTHO05D000560 3.3e-06 55.8 111 31.5
EL10Ac1g00378 Beta vulgaris HOM05D000457 ORTHO05D000560 4.3e-06 55.5 124 33.1
Potri.014G088000 Populus trichocarpa HOM05D000457 ORTHO05D000560 4.3e-06 55.5 134 30.6
Psat4g211840 Pisum sativum HOM05D000457 ORTHO05D000560 5.6e-06 55.1 139 26.6
GSVIVG01026991001 Vitis vinifera HOM05D000457 ORTHO05D000560 5.6e-06 55.1 131 30.5
Dinv24547 Davidia involucrata HOM05D000457 ORTHO05D000560 7.3e-06 54.7 69 44.9
Gohir.D09G043500 Gossypium hirsutum HOM05D000457 ORTHO05D000560 7.3e-06 54.7 139 29.5
MD01G1068100 Malus domestica HOM05D000457 ORTHO05D000560 7.3e-06 54.7 133 30.1
PSO541G2969 Papaver somniferum HOM05D000457 ORTHO05D000560 7.3e-06 54.7 135 33.3
Migut.B01782 Erythranthe guttata HOM05D000457 ORTHO05D000560 9.6e-06 54.3 130 30.8
GSVIVG01028873001 Vitis vinifera HOM05D000457 ORTHO05D000560 9.6e-06 54.3 135 32.6


User provided reference genes

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