Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 7.0e-50 200.3 100 100.0
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 2.3e-48 195.3 99 96.0
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.5e-44 182.6 99 86.9
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 3.4e-44 181.4 99 85.9
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 7.5e-44 180.3 99 85.9
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 7.5e-44 180.3 99 85.9
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 9.9e-44 179.9 99 85.9
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 1.3e-43 179.5 99 86.9
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 1.3e-43 179.5 99 84.8
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 6.4e-43 177.2 99 82.8
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 6.4e-43 177.2 99 84.8
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 1.1e-42 176.4 99 84.8
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.4e-42 176.0 99 82.8
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 1.9e-42 175.6 99 83.8
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 2.4e-42 175.3 99 84.8
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 2.4e-42 175.3 99 84.8
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 2.4e-42 175.3 99 81.8
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 3.2e-42 174.9 99 84.8
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 3.2e-42 174.9 99 83.8
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 4.1e-42 174.5 99 83.8
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 4.1e-42 174.5 99 84.8
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 5.4e-42 174.1 99 82.8
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 5.4e-42 174.1 99 82.8
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 5.4e-42 174.1 99 81.8
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 7.1e-42 173.7 99 83.8
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 7.1e-42 173.7 99 82.8
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 7.1e-42 173.7 99 84.8
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 9.2e-42 173.3 99 82.8
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 9.2e-42 173.3 99 83.8
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 1.2e-41 172.9 99 80.8
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 1.2e-41 172.9 99 80.8
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.6e-41 172.6 99 84.8
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 1.6e-41 172.6 99 83.8
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 2.1e-41 172.2 99 83.8
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 2.1e-41 172.2 99 84.8
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 2.7e-41 171.8 99 85.9
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 2.7e-41 171.8 99 80.8
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 3.5e-41 171.4 98 83.7
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 3.5e-41 171.4 99 83.8
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 3.5e-41 171.4 99 79.8
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 3.5e-41 171.4 99 79.8
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 3.5e-41 171.4 99 83.8
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 6.0e-41 170.6 99 81.8
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 6.0e-41 170.6 99 81.8
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 7.8e-41 170.2 99 84.8
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 7.8e-41 170.2 99 82.8
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 7.8e-41 170.2 99 82.8
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 7.8e-41 170.2 99 82.8
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 7.8e-41 170.2 99 79.8
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 1.0e-40 169.9 99 81.8
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 1.0e-40 169.9 99 81.8
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 1.0e-40 169.9 99 79.8
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.0e-40 169.9 99 79.8
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.3e-40 169.5 99 82.8
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 1.3e-40 169.5 99 76.8
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 1.7e-40 169.1 99 79.8
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 1.7e-40 169.1 99 79.8
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 1.7e-40 169.1 99 81.8
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 1.7e-40 169.1 99 82.8
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.3e-40 168.7 99 80.8
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 3.9e-40 167.9 99 80.8
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 6.6e-40 167.2 99 80.8
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 6.6e-40 167.2 99 80.8
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 6.6e-40 167.2 99 80.8
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 6.6e-40 167.2 99 80.8
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 6.6e-40 167.2 99 81.8
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 8.6e-40 166.8 95 82.1
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 1.1e-39 166.4 99 79.8
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 1.1e-39 166.4 99 80.8
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.9e-39 165.6 99 79.8
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.9e-39 165.6 99 78.8
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 1.9e-39 165.6 99 78.8
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 2.5e-39 165.2 99 78.8
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 2.5e-39 165.2 98 78.6
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 3.3e-39 164.9 99 78.8
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 3.3e-39 164.9 99 78.8
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 3.3e-39 164.9 99 78.8
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 4.3e-39 164.5 99 76.8
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 4.3e-39 164.5 99 77.8
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 4.3e-39 164.5 99 80.8
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 4.3e-39 164.5 99 78.8
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 4.3e-39 164.5 99 80.8
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 5.6e-39 164.1 99 76.8
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 7.3e-39 163.7 99 80.8
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 9.5e-39 163.3 99 79.8
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 1.2e-38 162.9 99 77.8
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 1.2e-38 162.9 99 77.8
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 1.2e-38 162.9 98 77.6
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 2.1e-38 162.2 99 77.8
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.6e-38 161.4 99 76.8
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 4.7e-38 161.0 99 77.8
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 6.2e-38 160.6 99 77.8
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 6.2e-38 160.6 99 77.8
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 6.2e-38 160.6 99 76.8
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 8.1e-38 160.2 99 74.7
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 1.1e-37 159.8 99 74.7
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 1.4e-37 159.5 99 75.8
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 1.8e-37 159.1 99 76.8
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 4.0e-37 157.9 99 75.8
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 4.0e-37 157.9 99 73.7
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 5.2e-37 157.5 99 73.7
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 8.9e-37 156.8 99 73.7
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 8.9e-37 156.8 113 69.0
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 8.9e-37 156.8 108 72.2
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 2.0e-36 155.6 98 71.4
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 1.7e-35 152.5 99 72.7
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 2.2e-35 152.1 99 74.7
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 4.9e-35 151.0 99 71.7
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 6.4e-35 150.6 100 73.0
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 8.4e-35 150.2 113 64.6
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 8.4e-35 150.2 99 72.7
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 1.9e-34 149.1 130 59.2
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 1.6e-33 146.0 99 72.7
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 2.1e-33 145.6 97 71.1
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 3.5e-33 144.8 88 76.1
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.1e-31 139.8 88 76.1
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 3.6e-30 134.8 97 64.9
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 6.9e-29 130.6 97 66.0
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 1.2e-25 119.8 92 58.7
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 4.8e-22 107.8 97 50.5
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 2.4e-21 105.5 97 53.6
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 4.0e-21 104.8 97 50.5
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 5.3e-21 104.4 71 70.4
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 5.3e-21 104.4 62 79.0
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 2.3e-16 89.0 67 70.1
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.0e-16 88.6 67 70.1
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 6.7e-16 87.4 62 69.4
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 9.6e-15 83.6 76 64.5
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 8.4e-11 70.5 54 59.3
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 8.2e-06 53.9 28 92.9


User provided reference genes

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