Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 2.3e-218 761.9 378 100.0
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.6e-187 659.4 376 85.4
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 1.0e-186 656.8 375 84.8
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 3.0e-186 655.2 377 83.6
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 5.7e-185 651.0 376 83.0
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 2.2e-184 649.0 378 83.9
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 8.2e-184 647.1 376 83.8
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 1.1e-183 646.7 375 83.5
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 5.3e-183 644.4 376 83.2
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 1.6e-182 642.9 347 89.3
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 2.7e-182 642.1 369 84.3
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 6.5e-181 637.5 376 83.2
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 1.1e-180 636.7 395 80.0
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 3.2e-180 635.2 376 81.4
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 5.5e-180 634.4 345 89.0
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 1.6e-179 632.9 363 84.3
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 2.1e-179 632.5 374 80.7
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 2.7e-179 632.1 347 86.7
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 3.6e-179 631.7 343 87.8
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 2.3e-178 629.0 374 80.2
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 6.8e-178 627.5 365 81.9
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 1.2e-177 626.7 347 87.0
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 2.6e-177 625.5 378 81.0
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 5.7e-177 624.4 378 79.6
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 5.7e-177 624.4 377 79.0
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 7.5e-177 624.0 378 79.9
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 1.3e-176 623.2 375 80.3
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 1.7e-176 622.9 381 79.8
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 3.7e-176 621.7 377 79.3
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 3.7e-176 621.7 374 79.7
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 4.8e-176 621.3 344 86.0
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 8.3e-176 620.5 379 79.7
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 1.1e-175 620.2 377 79.0
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 1.8e-175 619.4 375 78.7
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.1e-175 618.6 378 79.1
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.1e-175 618.6 378 79.1
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 5.4e-175 617.8 376 79.3
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 7.0e-175 617.5 369 79.9
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 9.1e-175 617.1 365 80.3
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 1.6e-174 616.3 379 79.2
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.6e-174 616.3 358 81.0
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 3.5e-174 615.1 354 82.5
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 1.0e-173 613.6 379 77.8
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.0e-173 613.6 379 78.6
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 1.3e-173 613.2 364 81.9
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 2.9e-173 612.1 375 77.3
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 3.8e-173 611.7 383 77.5
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 6.5e-173 610.9 350 82.0
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 1.5e-172 609.8 352 82.1
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.5e-172 609.8 343 84.8
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 3.2e-172 608.6 344 84.3
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 4.2e-172 608.2 343 84.3
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 5.5e-172 607.8 354 81.6
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 7.2e-172 607.4 343 84.0
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 2.7e-171 605.5 345 83.2
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 2.7e-171 605.5 357 82.9
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 3.6e-171 605.1 376 75.3
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 8.0e-171 604.0 343 83.4
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.3e-170 602.4 346 82.7
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 5.2e-170 601.3 363 79.9
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.5e-169 599.7 349 82.5
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 4.4e-169 598.2 368 76.6
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 5.7e-169 597.8 341 83.0
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 7.5e-169 597.4 346 81.2
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 7.5e-169 597.4 344 82.3
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 9.8e-169 597.0 375 75.5
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.3e-168 596.7 347 81.8
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 2.8e-168 595.5 376 74.7
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 2.8e-168 595.5 342 83.0
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 6.3e-168 594.3 345 83.2
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 6.3e-168 594.3 369 77.5
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 8.3e-168 594.0 347 81.6
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 8.3e-168 594.0 347 81.8
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 8.3e-168 594.0 344 82.0
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 2.4e-167 592.4 343 81.3
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 4.1e-167 591.7 367 76.8
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 4.1e-167 591.7 342 82.7
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 5.4e-167 591.3 342 81.9
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 7.0e-167 590.9 377 75.3
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.2e-166 590.1 369 77.0
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 1.2e-166 590.1 392 74.0
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 2.7e-166 589.0 375 73.9
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 4.5e-166 588.2 344 80.8
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 1.0e-165 587.0 344 79.9
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.0e-165 587.0 344 80.8
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 1.0e-165 587.0 354 79.4
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 2.9e-165 585.5 344 79.7
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 5.0e-165 584.7 345 80.6
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 4.3e-164 581.6 344 80.2
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 7.3e-164 580.9 348 79.6
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 6.1e-163 577.8 389 73.5
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.0e-162 575.1 409 69.2
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 3.4e-161 572.0 358 76.8
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 4.4e-161 571.6 344 80.5
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 5.7e-161 571.2 454 63.9
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 1.6e-158 563.1 346 76.6
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 1.3e-157 560.1 345 78.3
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 1.1e-156 557.0 344 76.2
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 2.5e-156 555.8 386 70.7
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 3.3e-156 555.4 358 76.3
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 2.1e-155 552.7 478 60.3
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 1.1e-151 540.4 341 74.8
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 9.2e-151 537.3 352 76.1
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 4.0e-146 521.9 339 72.9
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 1.5e-145 520.0 372 69.6
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 2.0e-145 519.6 341 73.6
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 4.4e-145 518.5 308 80.2
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 5.1e-141 505.0 339 71.4
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 4.0e-138 495.4 271 89.3
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 4.9e-136 488.4 375 64.8
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.3e-128 463.8 329 67.2
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 4.2e-127 458.8 407 61.4
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 5.3e-122 441.8 258 81.0
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.6e-121 439.5 254 81.9
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 1.0e-117 427.6 339 61.4
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 3.0e-117 426.0 228 89.5
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 3.3e-116 422.5 312 69.2
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 4.3e-116 422.2 312 69.2
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 1.3e-112 410.6 232 82.8
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.3e-109 399.8 365 58.4
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 9.6e-108 394.4 340 56.2
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 1.8e-106 390.2 360 58.9
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 7.6e-105 384.8 246 74.8
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 8.7e-101 371.3 220 82.7
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 4.5e-97 359.0 254 72.0
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 2.9e-96 356.3 356 50.8
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 8.5e-96 354.8 339 52.2
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 1.5e-89 334.0 190 84.7
Atru.chr6.2977 Acer truncatum HOM05D005273 ORTHO05D006195 2.0e-89 333.6 222 80.2
Actinidia11084 Actinidia chinensis HOM05D005273 ORTHO05D006195 4.4e-76 289.3 176 79.0
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 2.7e-65 253.4 165 74.5
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.0e-64 251.5 156 76.3
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 1.5e-47 194.5 99 96.0
Peaxi162Scf00112g00110 Petunia axillaris HOM05D005273 ORTHO05D006195 3.3e-47 193.4 115 77.4
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 4.3e-47 193.0 344 36.9
Lj1A718G26 Lonicera japonica HOM05D005273 ORTHO05D006195 8.0e-46 188.7 118 75.4
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 5.4e-42 176.0 276 43.1
TPR.G7356 Trifolium pratense HOM05D005273 ORTHO05D006195 9.2e-42 175.3 94 88.3
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 2.8e-38 163.7 363 33.3
Lj3g0005703 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-25 121.7 81 75.3
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 4.3e-23 113.2 271 33.6
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.7e-22 109.8 169 42.6
AUR62041872 Chenopodium quinoa HOM05D005273 ORTHO05D006195 4.7e-22 109.8 96 56.2
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 2.9e-19 100.5 87 58.6
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 1.2e-12 78.6 45 80.0
Lj5A796T26 Lonicera japonica HOM05D005273 ORTHO05D006195 6.6e-08 62.8 42 64.3


User provided reference genes

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