Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 1.3e-38 162.5 81 100.0
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 7.8e-31 136.7 74 87.8
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 2.3e-30 135.2 75 84.0
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 6.6e-30 133.7 74 86.5
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.6e-30 133.7 78 80.8
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 6.6e-30 133.7 72 88.9
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 1.1e-29 132.9 76 84.2
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 1.5e-29 132.5 74 83.8
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 2.5e-29 131.7 75 82.7
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 2.5e-29 131.7 76 76.3
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 7.3e-29 130.2 74 82.4
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 7.3e-29 130.2 74 82.4
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 9.5e-29 129.8 74 82.4
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 1.2e-28 129.4 76 80.3
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 1.6e-28 129.0 76 80.3
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 1.6e-28 129.0 74 81.1
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 2.8e-28 128.3 72 83.3
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 2.8e-28 128.3 78 75.6
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 3.6e-28 127.9 77 76.6
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 3.6e-28 127.9 76 78.9
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 3.6e-28 127.9 76 78.9
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 3.6e-28 127.9 76 78.9
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 4.7e-28 127.5 74 79.7
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 6.1e-28 127.1 81 74.1
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 6.1e-28 127.1 73 83.6
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 6.1e-28 127.1 73 83.6
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 8.0e-28 126.7 74 81.1
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 8.0e-28 126.7 72 80.6
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 1.4e-27 125.9 76 77.6
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 1.4e-27 125.9 76 77.6
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 1.4e-27 125.9 76 77.6
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 1.4e-27 125.9 76 77.6
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 1.4e-27 125.9 75 78.7
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.4e-27 125.9 74 78.4
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 1.4e-27 125.9 74 78.4
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 1.4e-27 125.9 72 81.9
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 1.4e-27 125.9 76 76.3
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 1.4e-27 125.9 71 83.1
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 1.8e-27 125.6 74 79.7
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 1.8e-27 125.6 75 76.0
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 2.3e-27 125.2 73 78.1
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 2.3e-27 125.2 71 83.1
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 2.3e-27 125.2 74 79.7
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 2.3e-27 125.2 73 78.1
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 3.0e-27 124.8 72 80.6
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 3.0e-27 124.8 73 79.5
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 4.0e-27 124.4 72 79.2
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 6.8e-27 123.6 71 80.3
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 6.8e-27 123.6 74 78.4
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 6.8e-27 123.6 72 79.2
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 8.9e-27 123.2 79 73.4
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 8.9e-27 123.2 77 75.3
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 8.9e-27 123.2 72 80.6
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.2e-26 122.9 73 78.1
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.2e-26 122.9 73 78.1
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.2e-26 122.9 73 78.1
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.2e-26 122.9 76 75.0
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.5e-26 122.5 71 80.3
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.5e-26 122.5 71 80.3
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 1.5e-26 122.5 74 77.0
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.5e-26 122.5 76 75.0
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 2.0e-26 122.1 79 72.2
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 2.0e-26 122.1 74 75.7
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 2.0e-26 122.1 69 79.7
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 3.4e-26 121.3 71 78.9
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 3.4e-26 121.3 75 72.0
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 4.4e-26 120.9 69 81.2
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 4.4e-26 120.9 72 77.8
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 7.5e-26 120.2 70 78.6
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 7.5e-26 120.2 70 78.6
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 9.8e-26 119.8 69 79.7
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 9.8e-26 119.8 69 79.7
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 9.8e-26 119.8 73 74.0
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 9.8e-26 119.8 72 77.8
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 9.8e-26 119.8 69 79.7
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 1.3e-25 119.4 78 71.8
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.7e-25 119.0 72 79.2
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.2e-25 118.6 65 84.6
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.7e-25 117.9 72 79.2
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 3.7e-25 117.9 68 80.9
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 8.3e-25 116.7 95 63.2
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 1.4e-24 115.9 69 76.8
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 1.8e-24 115.5 69 73.9
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 2.4e-24 115.2 76 71.1
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 2.4e-24 115.2 70 77.1
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 5.4e-24 114.0 68 76.5
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 5.4e-24 114.0 76 68.4
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 3.5e-23 111.3 77 67.5
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 3.5e-23 111.3 79 65.8
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 4.6e-23 110.9 68 75.0
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 7.8e-23 110.2 71 71.8
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 2.3e-22 108.6 57 87.7
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 1.9e-21 105.5 76 63.2
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 5.6e-21 104.0 59 84.7
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 1.2e-20 102.8 140 41.4
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 9.8e-18 93.2 75 57.3
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 1.7e-17 92.4 63 66.7
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 2.2e-17 92.0 73 64.4
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 3.7e-17 91.3 60 68.3
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 1.1e-16 89.7 65 66.2
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 3.2e-16 88.2 73 63.0
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 6.0e-15 84.0 176 34.7
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 2.6e-10 68.6 73 50.7
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 5.8e-10 67.4 33 90.9
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 1.7e-09 65.9 43 69.8
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 1.4e-08 62.8 64 51.6
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 1.9e-08 62.4 39 76.9
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 1.9e-08 62.4 39 76.9
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 7.1e-08 60.5 61 44.3
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 1.0e-06 56.6 31 83.9
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 3.0e-06 55.1 70 47.1


User provided reference genes

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