Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 1.1e-148 530.0 271 100.0
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 4.0e-108 395.2 279 75.6
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 1.5e-107 393.3 285 75.8
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.3e-103 380.2 279 73.8
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.6e-101 373.2 279 75.3
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.7e-101 372.1 277 71.8
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 3.7e-101 372.1 277 71.8
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 8.2e-101 370.9 257 78.2
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 8.2e-101 370.9 278 74.5
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 1.4e-100 370.2 276 71.7
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.8e-100 369.8 274 73.7
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 5.3e-100 368.2 280 71.8
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.6e-99 365.9 271 72.3
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 4.5e-99 365.2 272 72.1
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 7.6e-99 364.4 272 73.5
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.4e-97 360.1 280 72.5
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 9.3e-97 357.5 254 74.4
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 3.6e-96 355.5 274 69.7
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.6e-96 355.5 281 71.5
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 6.1e-96 354.8 281 71.9
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 1.4e-95 353.6 267 72.7
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.8e-95 353.2 271 72.7
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 6.7e-95 351.3 274 70.1
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.1e-94 350.5 274 71.2
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 1.9e-94 349.7 274 69.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.5e-94 349.4 268 72.4
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 3.3e-94 349.0 285 69.1
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 9.7e-94 347.4 271 67.5
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.3e-93 347.1 275 65.8
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 2.8e-93 345.9 252 71.0
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.8e-93 345.1 280 68.9
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.3e-93 344.7 280 68.6
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.4e-92 343.6 280 68.6
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.8e-92 343.2 239 77.8
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 1.8e-92 343.2 275 68.0
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.1e-92 342.4 274 66.1
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.1e-92 342.4 234 76.9
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 6.9e-92 341.3 270 68.1
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 1.5e-91 340.1 276 69.6
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 4.5e-91 338.6 275 68.7
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 4.5e-91 338.6 240 75.8
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 5.9e-91 338.2 275 67.6
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 1.7e-90 336.7 275 70.9
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 2.9e-90 335.9 273 70.0
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 3.8e-90 335.5 230 76.1
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 8.5e-90 334.3 296 66.2
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.1e-89 334.0 238 74.4
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 1.4e-89 333.6 215 79.5
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.4e-89 333.6 280 65.0
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.6e-88 330.1 273 68.9
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.6e-88 330.1 276 67.8
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.1e-88 329.7 277 66.8
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 2.1e-88 329.7 260 68.8
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 2.1e-88 329.7 228 78.5
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 2.1e-88 329.7 187 87.7
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 6.1e-88 328.2 189 87.8
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 6.1e-88 328.2 272 68.0
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 7.9e-88 327.8 278 66.5
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 1.8e-87 326.6 277 66.1
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 1.8e-87 326.6 188 87.2
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 5.1e-87 325.1 273 65.9
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 5.1e-87 325.1 273 65.9
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 5.1e-87 325.1 271 65.7
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 6.7e-87 324.7 273 67.0
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 8.8e-87 324.3 276 67.0
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 8.8e-87 324.3 274 65.3
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.5e-86 323.6 278 66.2
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.5e-86 323.6 278 66.2
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.5e-86 323.6 271 64.9
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.0e-86 323.2 278 66.2
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 2.0e-86 323.2 273 67.0
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 5.7e-86 321.6 292 65.1
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 5.7e-86 321.6 257 68.5
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 7.4e-86 321.2 281 66.2
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 9.7e-86 320.9 273 67.4
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 9.7e-86 320.9 252 69.8
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.3e-85 320.5 276 65.2
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.8e-85 319.3 196 81.6
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 3.7e-85 318.9 197 82.7
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 3.7e-85 318.9 249 71.1
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 4.8e-85 318.5 271 66.1
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 4.8e-85 318.5 191 85.3
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 6.3e-85 318.2 275 66.2
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 1.4e-84 317.0 273 64.5
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.4e-84 317.0 247 69.2
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.4e-84 317.0 237 72.2
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 2.4e-84 316.2 199 81.9
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 4.1e-84 315.5 275 65.8
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 5.3e-84 315.1 204 80.4
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 9.1e-84 314.3 271 64.2
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.2e-83 313.9 271 64.9
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.5e-83 313.5 239 72.0
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 2.0e-83 313.2 194 82.5
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.4e-81 307.0 242 66.5
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 5.5e-81 305.1 194 78.9
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.2e-80 303.9 275 61.1
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 5.2e-79 298.5 247 64.8
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 6.7e-79 298.1 190 75.8
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 6.7e-79 298.1 185 78.9
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 5.7e-78 295.0 263 63.5
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 3.6e-72 275.8 206 73.3
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-70 270.8 241 63.9
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 3.3e-70 269.2 195 67.2
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 6.5e-66 255.0 196 65.3
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 2.5e-65 253.1 273 56.8
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 8.8e-63 244.6 194 63.4
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 1.5e-62 243.8 218 65.1
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 3.7e-61 239.2 191 62.3
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 1.4e-60 237.3 169 74.6
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.6e-54 216.5 180 65.0
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 5.6e-49 198.7 219 47.9
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 2.8e-48 196.4 109 87.2
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 2.6e-46 189.9 180 60.0
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 4.4e-46 189.1 134 71.6
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.1e-44 184.5 185 49.7
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.4e-39 167.5 109 69.7
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 5.1e-34 149.1 150 61.3
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 6.6e-34 148.7 188 42.6
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 6.6e-26 122.1 81 72.8
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.5e-17 94.4 71 67.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 4.4e-14 82.8 93 54.8
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.7e-13 80.9 48 77.1
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 8.7e-10 68.6 44 72.7
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.9e-09 67.4 44 75.0
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.1e-07 61.6 65 55.4


User provided reference genes

Program Settings