Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 2.7e-106 388.7 196 100.0
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 2.2e-71 272.7 162 87.0
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 7.6e-48 194.5 181 63.0
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.4e-41 172.9 194 55.7
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 2.0e-40 169.9 179 54.2
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 2.6e-40 169.5 166 59.6
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 3.4e-40 169.1 175 54.9
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 4.5e-40 168.7 180 57.2
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 5.8e-40 168.3 174 55.7
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.2e-39 166.4 185 51.4
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 3.8e-39 165.6 167 58.1
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 4.9e-39 165.2 166 59.0
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.9e-39 165.2 181 54.7
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.4e-39 164.9 181 54.1
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 6.4e-39 164.9 167 59.3
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 6.4e-39 164.9 183 56.3
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 8.4e-39 164.5 164 57.3
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 1.1e-38 164.1 168 56.0
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.4e-38 163.7 171 53.2
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.4e-38 163.7 182 53.3
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 2.4e-38 162.9 165 56.4
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 3.2e-38 162.5 177 56.5
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.4e-38 161.8 172 54.1
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 9.3e-38 161.0 169 56.8
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 9.3e-38 161.0 162 57.4
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 1.2e-37 160.6 170 54.7
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 1.6e-37 160.2 172 53.5
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.6e-37 160.2 164 54.9
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 1.6e-37 160.2 173 57.8
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 3.5e-37 159.1 181 55.2
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 3.5e-37 159.1 166 54.2
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 3.5e-37 159.1 162 58.0
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 4.6e-37 158.7 184 50.5
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.6e-37 158.7 172 54.1
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.0e-36 157.5 162 56.8
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.3e-36 157.1 186 49.5
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 1.8e-36 156.8 168 52.4
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 3.9e-36 155.6 165 55.8
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 3.9e-36 155.6 170 53.5
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 5.1e-36 155.2 170 52.4
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 5.1e-36 155.2 174 52.3
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 5.1e-36 155.2 183 52.5
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 8.7e-36 154.5 187 50.3
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 1.1e-35 154.1 166 51.8
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.5e-35 153.7 175 53.7
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 1.5e-35 153.7 166 54.2
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.5e-35 153.7 162 54.9
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 1.5e-35 153.7 159 56.0
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 2.5e-35 152.9 102 75.5
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 4.3e-35 152.1 159 54.7
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 4.3e-35 152.1 159 54.7
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 7.4e-35 151.4 169 50.9
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 1.6e-34 150.2 170 52.4
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 2.1e-34 149.8 95 74.7
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 2.1e-34 149.8 115 65.2
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 2.1e-34 149.8 159 54.7
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 2.8e-34 149.4 170 49.4
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 2.8e-34 149.4 178 51.7
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 3.7e-34 149.1 162 54.3
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 6.2e-34 148.3 167 52.1
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 6.2e-34 148.3 158 54.4
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 8.1e-34 147.9 167 51.5
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 1.1e-33 147.5 167 51.5
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.8e-33 146.7 164 50.6
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 2.4e-33 146.4 103 68.0
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 4.0e-33 145.6 91 76.9
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 5.3e-33 145.2 151 52.3
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 6.9e-33 144.8 167 49.1
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 9.0e-33 144.4 170 50.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 2.0e-32 143.3 95 73.7
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 2.6e-32 142.9 165 55.8
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 2.6e-32 142.9 110 67.3
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 3.4e-32 142.5 167 52.1
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 4.5e-32 142.1 167 49.1
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 4.5e-32 142.1 161 52.2
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 4.5e-32 142.1 168 53.0
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 4.5e-32 142.1 173 50.3
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 5.8e-32 141.7 92 75.0
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 7.6e-32 141.4 165 51.5
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 2.2e-31 139.8 169 49.7
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 2.2e-31 139.8 104 67.3
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 3.8e-31 139.0 172 51.7
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 4.9e-31 138.7 151 51.7
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 6.4e-31 138.3 187 44.9
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 6.4e-31 138.3 165 50.3
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.1e-30 137.5 108 68.5
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 2.5e-30 136.3 171 47.4
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 2.5e-30 136.3 158 48.1
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.2e-30 136.0 160 49.4
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 7.1e-30 134.8 170 48.2
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 9.3e-30 134.4 175 47.4
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.5e-27 127.1 225 39.6
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 1.9e-27 126.7 151 50.3
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 1.9e-27 126.7 184 46.2
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 7.4e-27 124.8 89 69.7
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 9.6e-27 124.4 195 41.5
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.8e-26 122.9 79 75.9
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.7e-26 122.5 89 67.4
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 6.2e-26 121.7 90 70.0
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.2e-26 121.7 163 46.0
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 8.2e-26 121.3 134 53.7
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.1e-25 120.9 96 61.5
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.8e-25 120.2 175 41.1
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 6.9e-25 118.2 89 65.2
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 1.0e-23 114.4 156 43.6
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 2.2e-23 113.2 150 41.3
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 2.9e-23 112.8 156 42.9
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 1.4e-22 110.5 157 43.9
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 9.3e-22 107.8 149 49.0
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 5.1e-20 102.1 60 76.7
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 1.1e-17 94.4 93 52.7
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 3.1e-17 92.8 89 53.9
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.1e-17 92.4 57 77.2
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 3.4e-16 89.4 92 52.2
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 5.9e-16 88.6 75 57.3
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.6e-13 80.5 150 38.7
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 2.3e-12 76.6 46 78.3
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 3.0e-12 76.3 133 39.1
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 6.7e-12 75.1 57 61.4


User provided reference genes

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