Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2428 Acer truncatum HOM05D003450 ORTHO05D004150 2.8e-46 188.3 100 100.0
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 2.1e-33 145.6 84 92.9
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 1.0e-32 143.3 83 89.2
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 1.7e-32 142.5 83 89.2
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.3e-32 142.1 83 89.2
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.3e-32 142.1 83 89.2
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 2.3e-32 142.1 83 89.2
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 2.3e-32 142.1 83 88.0
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 3.9e-32 141.4 83 89.2
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 3.9e-32 141.4 83 88.0
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 5.1e-32 141.0 83 88.0
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 6.6e-32 140.6 84 90.5
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 2.5e-31 138.7 82 87.8
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 3.3e-31 138.3 82 87.8
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 3.3e-31 138.3 83 86.7
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 3.3e-31 138.3 83 86.7
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 5.6e-31 137.5 83 86.7
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 9.6e-31 136.7 83 85.5
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 1.3e-30 136.3 82 85.4
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.6e-30 136.0 83 84.3
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 1.6e-30 136.0 83 85.5
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 2.8e-30 135.2 83 81.9
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 2.8e-30 135.2 83 85.5
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 3.6e-30 134.8 82 84.1
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 6.2e-30 134.0 83 83.1
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 1.1e-29 133.3 83 81.9
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 3.1e-29 131.7 87 82.8
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 4.0e-29 131.3 82 85.4
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.3e-29 131.0 83 79.5
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 5.3e-29 131.0 83 83.1
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 1.2e-28 129.8 84 82.1
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 1.2e-28 129.8 82 84.1
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 1.2e-28 129.8 83 80.7
TAR623G1393 Trochodendron aralioides HOM05D003450 ORTHO05D004150 1.2e-28 129.8 83 80.7
CSS0010567 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.0e-28 129.0 83 79.5
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 2.6e-28 128.6 84 81.0
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 2.6e-28 128.6 82 82.9
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 3.4e-28 128.3 83 79.5
Sc07g0005170 Simmondsia chinensis HOM05D003450 ORTHO05D004150 3.4e-28 128.3 91 74.7
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.4e-28 127.9 83 80.7
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 5.8e-28 127.5 83 78.3
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 7.6e-28 127.1 83 80.7
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 7.6e-28 127.1 83 79.5
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 9.9e-28 126.7 83 79.5
FAN18G3542 Fragaria x ananassa HOM05D003450 ORTHO05D004150 9.9e-28 126.7 83 79.5
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 1.3e-27 126.3 81 80.2
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 1.7e-27 125.9 82 80.5
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 1.7e-27 125.9 83 78.3
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 1.7e-27 125.9 83 78.3
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 2.9e-27 125.2 83 79.5
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 3.8e-27 124.8 83 79.5
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 3.8e-27 124.8 85 78.8
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.9e-27 124.4 79 82.3
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 4.9e-27 124.4 83 78.3
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.9e-27 124.4 83 78.3
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 6.4e-27 124.0 83 75.9
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 8.4e-27 123.6 83 78.3
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 1.1e-26 123.2 83 75.9
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.4e-26 122.9 82 79.3
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 1.4e-26 122.9 83 78.3
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 1.4e-26 122.9 84 77.4
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 1.4e-26 122.9 82 79.3
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 1.9e-26 122.5 85 80.0
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 1.9e-26 122.5 82 78.0
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.9e-26 122.5 82 80.5
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 1.9e-26 122.5 83 77.1
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 2.4e-26 122.1 83 77.1
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 3.2e-26 121.7 83 77.1
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 3.2e-26 121.7 83 77.1
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.2e-26 121.3 79 79.7
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.2e-26 121.3 83 77.1
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 4.2e-26 121.3 86 75.6
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 7.1e-26 120.6 83 77.1
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 1.6e-25 119.4 83 75.9
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 2.1e-25 119.0 83 75.9
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 2.1e-25 119.0 83 75.9
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 2.1e-25 119.0 83 75.9
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.1e-25 119.0 82 79.3
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.5e-25 118.2 83 74.7
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.5e-25 118.2 83 74.7
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 3.5e-25 118.2 82 76.8
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 4.6e-25 117.9 76 78.9
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 6.0e-25 117.5 81 76.5
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 7.8e-25 117.1 81 71.6
Zm00001eb442080 Zea mays HOM05D003450 ORTHO05D004150 7.8e-25 117.1 81 71.6
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 1.0e-24 116.7 83 78.3
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 1.3e-24 116.3 82 79.3
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 1.7e-24 115.9 77 76.6
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 3.0e-24 115.2 82 78.0
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 3.0e-24 115.2 81 70.4
Zm00001eb191840 Zea mays HOM05D003450 ORTHO05D004150 3.0e-24 115.2 81 70.4
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 3.9e-24 114.8 83 72.3
Zm00001eb068810 Zea mays HOM05D003450 ORTHO05D004150 3.9e-24 114.8 81 70.4
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 3.9e-24 114.8 81 70.4
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 6.6e-24 114.0 84 71.4
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 6.6e-24 114.0 84 71.4
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 8.7e-24 113.6 82 78.0
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 8.7e-24 113.6 83 74.7
Zm00001eb235100 Zea mays HOM05D003450 ORTHO05D004150 8.7e-24 113.6 81 69.1
Zm00001eb162870 Zea mays HOM05D003450 ORTHO05D004150 1.5e-23 112.8 81 69.1
Zm00001eb190000 Zea mays HOM05D003450 ORTHO05D004150 1.5e-23 112.8 81 69.1
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 4.3e-23 111.3 82 76.8
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 5.6e-23 110.9 81 74.1
Zm00001eb170860 Zea mays HOM05D003450 ORTHO05D004150 1.6e-22 109.4 81 67.9
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 2.8e-22 108.6 85 71.8
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 1.1e-21 106.7 93 64.5
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 1.1e-21 106.7 93 64.5
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 1.8e-21 105.9 82 68.3
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 6.9e-21 104.0 82 68.3
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 9.0e-21 103.6 83 67.5
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 9.0e-21 103.6 82 72.0
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 9.0e-21 103.6 82 68.3
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 2.6e-20 102.1 82 64.6
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 2.6e-20 102.1 83 67.5
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 2.6e-20 102.1 71 81.7
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 4.5e-20 101.3 83 66.3
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 4.5e-20 101.3 83 66.3
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 4.5e-20 101.3 83 66.3
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 5.8e-20 100.9 80 71.2
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 5.8e-20 100.9 82 69.5
TPR.G33244 Trifolium pratense HOM05D003450 ORTHO05D004150 5.8e-20 100.9 81 69.1
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 9.9e-20 100.1 82 67.1
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 9.9e-20 100.1 72 79.2
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 1.3e-19 99.8 72 77.8
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 1.7e-19 99.4 83 63.9
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 1.7e-19 99.4 82 70.7
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 3.8e-19 98.2 83 63.9
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 4.9e-19 97.8 79 67.1
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 6.4e-19 97.4 71 77.5
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 2.4e-18 95.5 61 78.7
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 9.3e-18 93.6 83 61.4
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 4.6e-17 91.3 82 67.1
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 6.7e-16 87.4 75 64.0
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 2.5e-15 85.5 71 67.6
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 4.3e-15 84.7 98 51.0
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 5.6e-15 84.3 74 63.5
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 9.6e-15 83.6 74 62.2
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 9.6e-15 83.6 74 62.2
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 1.3e-14 83.2 68 66.2
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 2.1e-14 82.4 63 74.6
Zm00001eb367390 Zea mays HOM05D003450 ORTHO05D004150 2.1e-14 82.4 62 64.5
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 3.7e-14 81.6 89 53.9
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 3.7e-14 81.6 69 65.2
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 4.0e-13 78.2 97 50.5
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 5.3e-13 77.8 72 61.1
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 5.5e-10 67.8 66 63.6
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 8.7e-08 60.5 86 47.7
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 4.3e-07 58.2 120 37.5
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 7.4e-07 57.4 77 46.8


User provided reference genes

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