Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 0.0e+00 1336.2 728 100.0
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.1e-298 1029.6 730 79.3
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 1.2e-292 1009.6 730 77.3
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 8.7e-291 1003.4 729 77.2
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 4.3e-290 1001.1 731 76.6
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 1.0e-286 989.9 732 75.8
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.7e-286 989.2 728 76.2
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 2.8e-281 971.8 728 75.7
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 8.2e-281 970.3 730 74.5
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 1.4e-280 969.5 735 73.6
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 2.4e-280 968.8 816 69.4
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 4.5e-279 964.5 728 74.5
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 4.5e-279 964.5 699 76.5
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 6.3e-273 944.1 732 71.9
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 9.1e-272 940.3 732 72.1
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 7.7e-271 937.2 694 75.1
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.7e-270 936.0 729 72.6
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 3.8e-270 934.9 730 72.3
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 1.1e-269 933.3 732 72.5
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 7.2e-269 930.6 731 72.9
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.6e-268 929.5 732 71.6
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.0e-267 926.8 757 70.1
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 6.7e-267 924.1 731 72.1
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 3.3e-266 921.8 731 72.1
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 5.7e-266 921.0 673 75.9
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 8.2e-265 917.1 728 71.2
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.8e-264 916.0 728 71.4
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 2.2e-262 909.1 730 70.5
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 5.0e-262 907.9 729 72.4
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 1.9e-261 906.0 732 70.6
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 7.2e-261 904.0 729 70.6
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 1.2e-260 903.3 731 71.5
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 2.1e-260 902.5 731 70.5
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 4.4e-258 894.8 709 71.7
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 5.7e-258 894.4 733 69.6
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 5.7e-258 894.4 734 68.9
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 5.7e-258 894.4 731 69.8
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 2.8e-257 892.1 729 69.4
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 6.3e-257 891.0 735 69.5
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 4.1e-256 888.3 734 67.7
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 4.5e-255 884.8 727 67.7
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.0e-254 883.6 728 67.7
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 1.3e-254 883.2 729 67.8
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.1e-253 880.2 729 67.2
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 1.1e-253 880.2 729 68.6
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 3.2e-253 878.6 732 69.5
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 3.2e-253 878.6 753 67.9
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 5.5e-253 877.9 728 66.8
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 1.8e-251 872.8 730 67.0
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 6.8e-251 870.9 732 67.3
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 2.6e-250 869.0 730 67.5
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 3.4e-250 868.6 731 68.4
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 5.7e-250 867.8 729 69.1
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 2.4e-248 862.4 730 66.7
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 3.1e-248 862.1 732 67.9
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 1.7e-246 856.3 729 66.1
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 5.0e-246 854.7 733 66.0
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.2e-244 850.1 704 69.7
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 1.6e-244 849.7 729 67.5
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.1e-244 849.4 730 65.9
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 4.0e-243 845.1 708 67.2
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 6.8e-243 844.3 728 66.5
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 2.6e-242 842.4 804 63.1
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 9.8e-242 840.5 732 66.1
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.8e-240 836.3 719 66.2
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 3.1e-240 835.5 728 65.0
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 5.4e-240 834.7 817 62.1
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 4.5e-239 831.6 732 65.4
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.3e-238 830.1 737 64.5
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 1.1e-237 827.0 730 64.8
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 1.1e-237 827.0 730 64.8
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 1.2e-236 823.5 703 66.4
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 3.7e-233 812.0 700 68.3
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 7.0e-232 807.7 733 66.4
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 9.5e-229 797.3 730 65.3
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 6.4e-225 784.6 728 61.7
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 8.3e-225 784.3 701 63.8
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.9e-224 783.1 672 67.6
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 1.2e-223 780.4 728 63.5
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 3.0e-222 775.8 749 60.7
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.8e-220 769.2 729 63.9
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 3.6e-220 768.8 729 61.7
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.7e-214 750.0 704 62.8
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 3.6e-212 742.3 780 57.3
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.1e-211 740.7 729 59.8
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 2.6e-202 709.5 674 60.5
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 3.6e-196 689.1 735 55.8
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 1.8e-190 670.2 675 59.6
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.8e-190 670.2 730 54.2
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 1.5e-181 640.6 730 52.5
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 6.2e-180 635.2 600 63.3
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 5.9e-162 575.5 579 59.4
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 3.1e-155 553.1 539 61.2
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 3.0e-150 536.6 430 71.2
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 5.3e-147 525.8 359 79.1
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 2.0e-141 507.3 589 54.8
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 8.2e-140 501.9 428 69.9
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.5e-136 491.1 363 73.8
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 8.0e-127 458.8 299 80.6
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 7.0e-115 419.1 271 81.9
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 3.6e-111 406.8 385 62.3
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 1.2e-95 355.1 710 36.3
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 6.2e-95 352.8 503 50.1
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.2e-90 338.6 444 49.8
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.8e-85 319.7 344 58.1
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 2.4e-83 314.3 373 54.2
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 1.6e-82 311.6 670 36.0
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 6.6e-81 306.2 685 37.2
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 1.9e-80 304.7 670 31.9
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 1.3e-76 292.0 273 61.2
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.5e-72 278.5 705 30.8
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 4.2e-67 260.4 762 29.7
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 6.3e-39 166.8 136 69.1
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.9e-27 128.6 84 72.6
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 1.0e-25 122.9 502 25.3
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 1.4e-25 122.5 193 46.6
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 2.3e-25 121.7 121 58.7
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 5.7e-24 117.1 110 58.2
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.9e-20 104.8 124 46.8
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.5e-19 102.4 154 42.2
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 5.5e-19 100.5 94 60.6
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 1.2e-18 99.4 71 73.2
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.0e-17 96.3 110 50.9
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 8.8e-17 93.2 108 57.4
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.7e-16 90.5 55 85.5
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 1.6e-13 82.4 118 40.7
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 4.5e-13 80.9 68 61.8
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 7.7e-13 80.1 238 31.1
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 1.7e-12 79.0 101 47.5
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.2e-10 72.8 55 65.5
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 1.7e-07 62.4 41 70.7
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 2.8e-07 61.6 41 78.0


User provided reference genes

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