Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2368 Acer truncatum HOM05D004010 ORTHO05D004995 9.1e-119 430.3 218 100.0
Atru.chr6.2275 Acer truncatum HOM05D004010 ORTHO05D004995 9.2e-103 377.1 194 99.5
Ciclev10017517m.g Citrus clementina HOM05D004010 ORTHO05D004995 7.3e-92 340.9 211 79.6
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 8.1e-83 310.8 208 74.5
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 8.1e-83 310.8 208 74.5
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 8.1e-83 310.8 208 74.5
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 1.9e-79 299.7 211 73.5
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 9.2e-79 297.4 207 72.5
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 1.2e-78 297.0 208 71.6
Cpa.g.sc108.59 Carica papaya HOM05D004010 ORTHO05D004995 1.0e-77 293.9 211 68.2
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 2.3e-77 292.7 207 72.0
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 3.9e-77 292.0 211 68.2
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 5.1e-77 291.6 209 71.3
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 5.1e-77 291.6 208 70.2
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 8.6e-77 290.8 210 71.4
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 1.1e-76 290.4 208 69.2
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 1.5e-76 290.0 212 68.9
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 5.6e-76 288.1 208 70.2
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 1.2e-75 287.0 210 70.0
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 2.1e-75 286.2 211 68.2
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 3.6e-75 285.4 211 70.1
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 3.6e-75 285.4 210 70.5
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 8.1e-75 284.3 210 69.5
FAN05G3555 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.8e-74 283.1 210 68.6
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.8e-74 283.1 210 69.0
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.8e-74 283.1 210 69.0
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 4.0e-74 282.0 208 70.2
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 4.4e-73 278.5 213 64.3
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 2.2e-72 276.2 211 68.2
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 3.8e-72 275.4 215 63.7
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 1.6e-70 270.0 211 63.5
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 2.7e-70 269.2 215 61.9
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 3.5e-70 268.9 208 63.9
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 4.6e-70 268.5 211 62.1
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 6.0e-70 268.1 215 62.8
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 6.0e-70 268.1 211 64.5
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 6.0e-70 268.1 215 61.9
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 6.0e-70 268.1 211 63.0
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 7.8e-70 267.7 211 64.5
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 2.3e-69 266.2 215 62.3
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 2.3e-69 266.2 208 64.9
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 3.9e-69 265.4 211 64.0
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 3.9e-69 265.4 208 64.9
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 1.5e-68 263.5 208 66.8
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 3.3e-68 262.3 208 65.4
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 3.3e-68 262.3 210 62.9
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 1.3e-67 260.4 208 66.3
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 2.1e-67 259.6 208 63.0
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 2.1e-67 259.6 208 62.5
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 2.1e-67 259.6 208 62.0
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 2.8e-67 259.2 215 62.3
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 6.2e-67 258.1 208 61.5
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 6.2e-67 258.1 208 61.5
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 2.4e-66 256.1 211 62.1
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 3.1e-66 255.8 215 60.5
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 3.1e-66 255.8 211 62.1
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 3.1e-66 255.8 215 60.5
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 3.1e-66 255.8 215 60.5
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 1.2e-65 253.8 215 60.5
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 1.2e-65 253.8 215 60.0
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.2e-65 253.8 223 61.4
Oeu006812.1 Olea europaea HOM05D004010 ORTHO05D004995 1.2e-65 253.8 211 61.1
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 2.6e-65 252.7 211 63.5
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 4.9e-64 248.4 211 59.7
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 6.4e-64 248.1 208 61.5
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.1e-63 247.3 239 56.5
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 4.2e-63 245.4 211 57.8
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 1.6e-62 243.4 208 59.6
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 4.6e-62 241.9 208 61.1
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 1.8e-61 240.0 213 60.1
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 1.8e-61 240.0 208 60.1
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 3.0e-61 239.2 213 58.7
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.9e-60 236.5 211 58.8
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 2.5e-60 236.1 214 57.9
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 3.3e-60 235.7 212 57.1
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 1.8e-58 229.9 208 56.2
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 3.1e-58 229.2 208 58.2
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 2.6e-57 226.1 208 60.6
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 2.6e-57 226.1 209 56.9
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 3.8e-56 222.2 216 53.2
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 1.4e-55 220.3 210 56.2
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 2.4e-55 219.5 210 55.2
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 1.6e-54 216.9 213 55.9
CSS0021155 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 6.7e-53 211.5 211 53.6
Hma1.2p1_1291F.1_g273520 Hydrangea macrophylla HOM05D004010 ORTHO05D004995 4.8e-51 205.3 175 60.6
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 1.1e-50 204.1 211 53.1
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 1.2e-49 200.7 211 52.1
CDE05G2835 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 2.6e-49 199.5 208 49.5
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 4.6e-46 188.7 208 51.4
MBI10_g46391_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 2.3e-45 186.4 259 43.6
CAN.G473.5 Capsicum annuum HOM05D004010 ORTHO05D004995 7.6e-41 171.4 132 65.9
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 1.9e-39 166.8 211 43.1
FvH4_6g51551 Fragaria vesca HOM05D004010 ORTHO05D004995 3.6e-38 162.5 122 65.6
MBI10_g39276_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 1.0e-37 161.0 224 43.8
FAN14G2166 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.3e-35 154.1 152 59.2
Phvul.004G009127 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 8.5e-32 141.4 134 56.7
Actinidia15574 Actinidia chinensis HOM05D004010 ORTHO05D004995 1.9e-31 140.2 176 45.5
Ah.06g187170 Amaranthus hybridus HOM05D004010 ORTHO05D004995 3.6e-30 136.0 137 52.6
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 1.7e-24 117.1 208 34.6
SEGI_19034 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 1.3e-19 100.9 203 34.5
Gohir.A09G028500 Gossypium hirsutum HOM05D004010 ORTHO05D004995 8.2e-19 98.2 80 62.5
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 4.5e-17 92.4 77 59.7
FvH4_6g51541 Fragaria vesca HOM05D004010 ORTHO05D004995 1.9e-15 87.0 53 81.1
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 6.1e-14 82.0 206 28.2
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 2.6e-12 76.6 61 60.7
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 2.8e-11 73.2 208 30.3
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 1.1e-10 71.2 123 39.0
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 3.1e-10 69.7 61 54.1
CBR_g19447 Chara braunii HOM05D004010 ORTHO05D004995 7.0e-10 68.6 246 27.6
BcaB05g24178 Brassica carinata HOM05D004010 ORTHO05D027244 2.0e-09 67.0 108 37.0
FAN05G1652 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.7e-09 66.6 50 64.0
HPP92_004913 Vanilla planifolia HOM05D004010 ORTHO05D004995 1.7e-08 63.9 87 43.7
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 3.2e-07 59.7 200 30.5


User provided reference genes

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