Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2339 Acer truncatum HOM05D005943 ORTHO05D007328 2.7e-103 378.6 187 100.0
Duzib177G0451 Durio zibethinus HOM05D005943 ORTHO05D007328 3.3e-69 265.4 181 76.8
Potri.013G013700 Populus trichocarpa HOM05D005943 ORTHO05D007328 5.7e-69 264.6 181 76.2
COL.COLO4_10548 Corchorus olitorius HOM05D005943 ORTHO05D007328 7.4e-69 264.2 181 76.2
MSTRG.4510 Avicennia marina HOM05D005943 ORTHO05D007328 9.7e-69 263.8 181 75.7
Migut.E01764 Erythranthe guttata HOM05D005943 ORTHO05D007328 9.7e-69 263.8 181 76.2
CiPaw.07G023200 Carya illinoinensis HOM05D005943 ORTHO05D007328 1.3e-68 263.5 181 76.2
Haze_04120 Corylus avellana HOM05D005943 ORTHO05D007328 1.3e-68 263.5 195 73.8
Potri.005G023600 Populus trichocarpa HOM05D005943 ORTHO05D007328 2.2e-68 262.7 181 75.7
Thecc.05G315300 Theobroma cacao HOM05D005943 ORTHO05D007328 3.7e-68 261.9 181 75.1
Atru.chr2.102 Acer truncatum HOM05D001727 ORTHO05D001758 4.8e-68 261.5 174 79.9
Cpa.g.sc48.107 Carica papaya HOM05D005943 ORTHO05D007328 4.8e-68 261.5 181 75.7
Cc02_g34350 Coffea canephora HOM05D005943 ORTHO05D007328 4.8e-68 261.5 181 74.0
Gohir.A11G269200 Gossypium hirsutum HOM05D005943 ORTHO05D007328 6.3e-68 261.2 181 75.1
Gohir.D11G279400 Gossypium hirsutum HOM05D005943 ORTHO05D007328 6.3e-68 261.2 181 75.1
Ciclev10002634m.g Citrus clementina HOM05D005943 ORTHO05D007328 8.2e-68 260.8 181 75.7
Manes.08G116100 Manihot esculenta HOM05D005943 ORTHO05D007328 8.2e-68 260.8 181 75.1
TWI56G0702 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 8.2e-68 260.8 181 75.7
unitig_0.g32 Utricularia gibba HOM05D005943 ORTHO05D007328 8.2e-68 260.8 184 73.4
Gorai.007G301600 Gossypium raimondii HOM05D005943 ORTHO05D007328 1.4e-67 260.0 181 74.6
Lalb_Chr11g0067091 Lupinus albus HOM05D005943 ORTHO05D007328 1.4e-67 260.0 187 72.2
Lalb_Chr23g0271691 Lupinus albus HOM05D005943 ORTHO05D007328 2.4e-67 259.2 181 74.6
Ca_16733_v3 Cicer arietinum L. HOM05D005943 ORTHO05D007328 3.1e-67 258.8 191 71.2
QL03p019642 Quercus lobata HOM05D005943 ORTHO05D007328 4.1e-67 258.5 180 75.0
CSS0008719 Camellia sinensis var. sinensis HOM05D005943 ORTHO05D007328 5.3e-67 258.1 181 74.6
CsaV3_1G038680 Cucumis sativus L. HOM05D005943 ORTHO05D007328 5.3e-67 258.1 181 74.0
Dinv40356 Davidia involucrata HOM05D005943 ORTHO05D007328 5.3e-67 258.1 181 74.6
Lsat_1_v5_gn_7_72860 Lactuca sativa HOM05D005943 ORTHO05D007328 5.3e-67 258.1 181 75.7
Medtr3g091920 Medicago truncatula HOM05D005943 ORTHO05D007328 5.3e-67 258.1 181 75.1
GSVIVG01031169001 Vitis vinifera HOM05D005943 ORTHO05D007328 5.3e-67 258.1 181 74.6
RcHm_v2.0_Chr3g0456101 Rosa chinensis HOM05D005943 ORTHO05D007328 7.0e-67 257.7 181 75.7
Sed0012379 Sechium edule HOM05D005943 ORTHO05D007328 7.0e-67 257.7 177 75.1
Dinv30834 Davidia involucrata HOM05D005943 ORTHO05D007328 9.1e-67 257.3 181 74.0
HanXRQChr11g0339821 Helianthus annuus HOM05D005943 ORTHO05D007328 9.1e-67 257.3 181 75.1
PSO170G5805 Papaver somniferum HOM05D005943 ORTHO05D007328 1.2e-66 256.9 181 75.1
PSO407G0008 Papaver somniferum HOM05D005943 ORTHO05D007328 1.2e-66 256.9 181 75.1
PGR031G0471 Punica granatum HOM05D005943 ORTHO05D007328 1.5e-66 256.5 179 74.3
Nn3g21529 Nelumbo nucifera HOM05D005943 ORTHO05D007328 2.0e-66 256.1 181 73.5
Sed0027178 Sechium edule HOM05D005943 ORTHO05D007328 2.0e-66 256.1 181 73.5
SGA_v2.0_scaffold42G16032 Striga asiatica HOM05D005943 ORTHO05D007328 2.0e-66 256.1 194 70.1
Eucgr.L02935 Eucalyptus grandis HOM05D005943 ORTHO05D007328 2.6e-66 255.8 176 76.1
ECA236G0332 Erigeron canadensis HOM05D005943 ORTHO05D007328 3.5e-66 255.4 181 74.6
Lj1g0013041 Lotus japonicus HOM05D005943 ORTHO05D007328 4.5e-66 255.0 181 74.0
TPR.G33656 Trifolium pratense HOM05D005943 ORTHO05D007328 7.7e-66 254.2 181 73.5
Aqoxy5G00777 Aquilegia oxysepala HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 72.9
CANSAT35G1584 Cannabis sativa HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 73.5
Phvul.009G047900 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 72.9
Solyc01g099890.3 Solanum lycopersicum HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 74.6
Sopen01g043410 Solanum pennellii HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 74.6
THA.LOC104805894 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 72.4
THA.LOC104820740 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 1.7e-65 253.1 180 73.3
Glyma.04G232900 Glycine max HOM05D005943 ORTHO05D007328 2.2e-65 252.7 181 72.9
Psat3g152320 Pisum sativum HOM05D005943 ORTHO05D007328 2.2e-65 252.7 181 72.9
Prupe.6G319400 Prunus persica HOM05D005943 ORTHO05D007328 2.2e-65 252.7 181 74.0
PGSC0003DMG400024722 Solanum tuberosum HOM05D005943 ORTHO05D007328 2.2e-65 252.7 180 75.0
AT1G09150 Arabidopsis thaliana HOM05D005943 ORTHO05D007328 2.9e-65 252.3 181 72.4
Glyma.06G132000 Glycine max HOM05D005943 ORTHO05D007328 2.9e-65 252.3 181 72.4
CDE02G2801 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 6.5e-65 251.1 181 71.8
Os01g0314300 Oryza sativa ssp. japonica HOM05D005943 ORTHO05D007328 6.5e-65 251.1 181 71.8
MD04G1198400 Malus domestica HOM05D005943 ORTHO05D007328 8.5e-65 250.8 186 71.0
MD12G1211900 Malus domestica HOM05D005943 ORTHO05D007328 8.5e-65 250.8 181 72.4
AL1G19590 Arabidopsis lyrata HOM05D005943 ORTHO05D007328 1.1e-64 250.4 181 71.3
CARHR009020 Cardamine hirsuta HOM05D005943 ORTHO05D007328 1.1e-64 250.4 181 71.8
Sabra13G0012200 Salix brachista HOM05D001727 ORTHO05D007328 1.5e-64 250.0 175 74.3
HPP92_018258 Vanilla planifolia HOM05D005943 ORTHO05D007328 1.5e-64 250.0 181 70.7
BcaC05g24766 Brassica carinata HOM05D005943 ORTHO05D007328 2.5e-64 249.2 181 71.3
Sc06g0003910 Simmondsia chinensis HOM05D005943 ORTHO05D007328 3.2e-64 248.8 186 69.4
Carub.0001s0844 Capsella rubella HOM05D005943 ORTHO05D007328 4.2e-64 248.4 181 70.7
Duzib128G1848 Durio zibethinus HOM05D005943 ORTHO05D007328 4.2e-64 248.4 175 75.4
MELO3C015293.2 Cucumis melo HOM05D001727 ORTHO05D001758 7.2e-64 247.7 175 73.1
Thhalv10008886m.g Eutrema salsugineum HOM05D005943 ORTHO05D007328 7.2e-64 247.7 181 70.7
Sabra05G0029200 Salix brachista HOM05D001727 ORTHO05D050481 7.2e-64 247.7 175 73.7
Sp1g07730 Schrenkiella parvula HOM05D005943 ORTHO05D007328 7.2e-64 247.7 181 70.7
ATR0796G119 Amborella trichopoda HOM05D005943 ORTHO05D007328 9.4e-64 247.3 175 74.3
Oeu048875.1 Olea europaea HOM05D005943 ORTHO05D007328 9.4e-64 247.3 181 72.4
AUR62005222 Chenopodium quinoa HOM05D005943 ORTHO05D007328 1.2e-63 246.9 181 70.7
Peaxi162Scf00037g01419 Petunia axillaris HOM05D005943 ORTHO05D007328 1.2e-63 246.9 173 74.6
Hund07108 Selenicereus undatus HOM05D005943 ORTHO05D007328 1.2e-63 246.9 180 71.1
DCAR_022176 Daucus carota HOM05D005943 ORTHO05D007328 2.1e-63 246.1 193 69.4
Nn4g25770 Nelumbo nucifera HOM05D005943 ORTHO05D007328 4.7e-63 245.0 175 72.6
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 8.0e-63 244.2 180 70.0
Rhsim05G0137500 Rhododendron simsii HOM05D005943 ORTHO05D007328 1.0e-62 243.8 201 67.2
FvH4_6g06770 Fragaria vesca HOM05D005943 ORTHO05D007328 3.0e-62 242.3 174 74.1
BcaC07g38477 Brassica carinata HOM05D005943 ORTHO05D007328 5.2e-62 241.5 182 71.4
TWI12G0949 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 6.7e-62 241.1 171 74.9
A06p05940 Brassica napus HOM05D005943 ORTHO05D007328 1.1e-61 240.4 176 70.5
C05p07140 Brassica napus HOM05D005943 ORTHO05D007328 1.1e-61 240.4 176 70.5
C08p12460 Brassica napus HOM05D005943 ORTHO05D007328 1.1e-61 240.4 176 71.6
C08p12470 Brassica napus HOM05D005943 ORTHO05D007328 1.1e-61 240.4 176 71.0
A08p34800 Brassica napus HOM05D005943 ORTHO05D007328 2.6e-61 239.2 176 70.5
BraA06t23801Z Brassica rapa HOM05D005943 ORTHO05D007328 2.6e-61 239.2 176 69.9
MD04G1083700 Malus domestica HOM05D005943 ORTHO05D007328 2.6e-61 239.2 208 63.5
Mapoly0028s0141 Marchantia polymorpha HOM05D005943 ORTHO05D007328 2.6e-61 239.2 181 69.1
AagrBONN_evm.TU.Sc2ySwM_228.5507 Anthoceros agrestis HOM05D005943 ORTHO05D007328 3.3e-61 238.8 175 70.3
BolC8t48886H Brassica oleracea HOM05D005943 ORTHO05D007328 4.4e-61 238.4 175 71.4
Pp3c25_690 Physcomitrium patens HOM05D005943 ORTHO05D007328 1.4e-59 233.4 181 67.4
Nitab4.5_0003113g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 1.8e-59 233.0 173 72.3
EL10Ac4g09897 Beta vulgaris HOM05D005943 ORTHO05D007328 9.1e-59 230.7 175 70.9
VMungo1309G2765 Vigna mungo HOM05D005943 ORTHO05D007328 5.7e-53 211.5 154 70.8
FAN02G3650 Fragaria x ananassa HOM05D005943 ORTHO05D007328 4.8e-52 208.4 181 63.5
Lj7A623G46 Lonicera japonica HOM05D005943 ORTHO05D007328 3.1e-51 205.7 153 73.2
Nitab4.5_0003497g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 7.0e-51 204.5 154 71.4
CDE09G0522 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 9.1e-51 204.1 151 69.5
arahy.Tifrunner.gnm1.ann1.KZ6QJ9 Arachis hypogaea HOM05D005943 ORTHO05D007328 1.2e-50 203.8 154 70.1
Aa31sc55G100 Aethionema arabicum HOM05D005943 ORTHO05D007328 2.9e-49 199.1 154 68.8
FAN09G2521 Fragaria x ananassa HOM05D005943 ORTHO05D007328 2.9e-49 199.1 176 62.5
AUR62000742 Chenopodium quinoa HOM05D005943 ORTHO05D007328 2.5e-48 196.1 154 67.5
BraA08t35391Z Brassica rapa HOM05D005943 ORTHO05D007328 9.8e-45 184.1 141 66.0
Eucgr.H03253 Eucalyptus grandis HOM05D005943 ORTHO05D007328 1.7e-44 183.3 98 89.8
Zm00001eb339860 Zea mays HOM05D005943 ORTHO05D007328 6.3e-44 181.4 98 87.8
MBI18_g25341_MAGBIO Magnolia biondii HOM05D005943 ORTHO05D007328 2.4e-43 179.5 98 87.8
TAR362G1289 Trochodendron aralioides HOM05D005943 ORTHO05D007328 3.1e-43 179.1 98 87.8
vmacro19698 Vaccinium macrocarpon HOM05D005943 ORTHO05D007328 3.1e-43 179.1 98 86.7
Phvul.009G047833 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 2.0e-42 176.4 98 85.7
HPP92_018260 Vanilla planifolia HOM05D005943 ORTHO05D007328 7.7e-42 174.5 95 86.3
PRCOL_00003880 Prasinoderma coloniale HOM05D005943 ORTHO05D007328 1.7e-41 173.3 181 50.3
Eucgr.H03239 Eucalyptus grandis HOM05D005943 ORTHO05D007328 9.5e-40 167.5 92 89.1
Haze_26177 Corylus avellana HOM05D005943 ORTHO05D007328 1.6e-39 166.8 175 46.9
BcaC07g38474 Brassica carinata HOM05D005943 ORTHO05D007328 2.8e-39 166.0 92 85.9
MCO12G098 Micromonas commoda HOM05D005943 ORTHO05D007328 3.6e-39 165.6 169 52.1
Eucgr.H03249 Eucalyptus grandis HOM05D005943 ORTHO05D007328 8.0e-39 164.5 86 90.7
arahy.Tifrunner.gnm1.ann1.2NZ4WG Arachis hypogaea HOM05D000716 ORTHO05D004822 2.3e-38 162.9 127 66.9
SalBow1G5257 Salvia bowleyana HOM05D005943 ORTHO05D007328 2.9e-36 156.0 155 57.4
TAR633G1587 Trochodendron aralioides HOM05D005943 ORTHO05D007328 1.8e-35 153.3 156 60.3
CBR_g36436 Chara braunii HOM05D005943 ORTHO05D007328 2.4e-35 152.9 91 74.7
Duzib106G1343 Durio zibethinus HOM05D005943 ORTHO05D007328 9.2e-35 151.0 157 57.3
Eucgr.H03245 Eucalyptus grandis HOM05D005943 ORTHO05D007328 8.0e-31 137.9 92 77.2
ClCG03G017220 Citrullus lanatus HOM05D001727 ORTHO05D001758 9.8e-29 131.0 66 90.9
SEGI_36457 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 1.0e-25 120.9 71 80.3
Cre50.g761397 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 3.0e-17 92.8 126 42.9
Nn1g03974 Nelumbo nucifera HOM05D005943 ORTHO05D007328 8.6e-17 91.3 50 80.0
Eucgr.H03250 Eucalyptus grandis HOM05D005943 ORTHO05D007328 5.6e-16 88.6 53 84.9
SEGI_40081 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 3.4e-13 79.3 49 79.6
Cre03.g168605 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 1.9e-11 73.6 56 58.9
CBR_g20980 Chara braunii HOM05D005943 ORTHO05D007328 9.2e-11 71.2 54 63.0
EL10Ac5g11162 Beta vulgaris HOM05D005943 ORTHO05D007328 8.6e-09 64.7 36 83.3
Dinv22143 Davidia involucrata HOM05D005117 ORTHO05D005956 2.4e-06 56.6 181 25.4


User provided reference genes

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