Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 5.7e-98 360.9 182 100.0
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 2.5e-53 212.6 130 83.1
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 4.7e-52 208.4 125 81.6
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 8.0e-52 207.6 125 80.8
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 4.0e-51 205.3 121 81.8
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 4.0e-51 205.3 125 81.6
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 1.2e-50 203.8 118 83.9
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 4.4e-50 201.8 125 78.4
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 9.8e-50 200.7 125 80.0
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 9.8e-50 200.7 125 80.0
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.3e-49 200.3 124 78.2
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 1.3e-49 200.3 125 79.2
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 1.7e-49 199.9 119 83.2
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 3.7e-49 198.7 121 83.5
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 3.7e-49 198.7 119 80.7
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 4.9e-49 198.4 137 76.6
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.1e-48 197.2 124 75.0
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.1e-48 197.2 124 75.0
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 1.9e-48 196.4 125 76.0
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 2.4e-48 196.1 125 78.4
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 3.2e-48 195.7 121 79.3
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 4.1e-48 195.3 123 77.2
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 5.4e-48 194.9 125 74.4
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 7.0e-48 194.5 125 76.8
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 7.0e-48 194.5 118 80.5
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 9.2e-48 194.1 118 82.2
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.0e-47 193.0 124 75.0
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 2.0e-47 193.0 125 74.4
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 2.7e-47 192.6 121 76.9
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 3.5e-47 192.2 121 79.3
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 3.5e-47 192.2 125 76.0
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 4.6e-47 191.8 143 69.9
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 6.0e-47 191.4 121 76.9
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 6.0e-47 191.4 125 73.6
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.0e-47 191.4 160 66.2
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 7.8e-47 191.0 119 77.3
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.0e-46 190.7 121 78.5
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.3e-46 190.3 121 79.3
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 1.7e-46 189.9 125 76.0
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 1.7e-46 189.9 126 73.8
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 1.7e-46 189.9 125 72.0
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 2.3e-46 189.5 125 75.2
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 2.3e-46 189.5 125 75.2
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 3.0e-46 189.1 121 76.0
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 3.9e-46 188.7 130 73.8
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 6.6e-46 188.0 121 76.0
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 8.6e-46 187.6 125 72.8
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 8.6e-46 187.6 119 79.0
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 8.6e-46 187.6 121 74.4
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 8.6e-46 187.6 116 78.4
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 1.1e-45 187.2 125 72.0
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.1e-45 187.2 124 72.6
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 1.5e-45 186.8 125 72.0
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 2.5e-45 186.0 121 76.9
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 2.5e-45 186.0 125 72.8
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 3.3e-45 185.7 125 75.2
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 3.3e-45 185.7 121 74.4
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 4.3e-45 185.3 125 72.8
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 5.6e-45 184.9 125 73.6
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 5.6e-45 184.9 118 76.3
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 5.6e-45 184.9 125 74.4
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 5.6e-45 184.9 119 75.6
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 7.3e-45 184.5 125 73.6
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 7.3e-45 184.5 125 73.6
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 7.3e-45 184.5 125 73.6
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 7.3e-45 184.5 120 76.7
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 9.5e-45 184.1 119 79.0
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 9.5e-45 184.1 119 75.6
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 1.2e-44 183.7 119 79.0
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-44 183.7 118 77.1
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.2e-44 183.7 125 73.6
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.6e-44 183.3 137 70.8
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 2.8e-44 182.6 125 73.6
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 3.6e-44 182.2 125 72.8
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 4.7e-44 181.8 125 72.8
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 4.7e-44 181.8 125 72.8
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 4.7e-44 181.8 125 72.8
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 8.1e-44 181.0 120 73.3
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.8e-43 179.9 118 73.7
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 5.2e-43 178.3 125 72.8
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 6.8e-43 177.9 105 81.9
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 2.6e-42 176.0 108 80.6
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.4e-42 175.6 147 61.2
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 3.4e-42 175.6 105 81.9
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 5.8e-42 174.9 118 75.4
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 7.5e-42 174.5 124 69.4
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 9.8e-42 174.1 120 70.0
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 6.4e-41 171.4 112 74.1
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 8.3e-41 171.0 145 60.7
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 8.3e-41 171.0 113 76.1
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 4.1e-40 168.7 119 68.1
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 5.4e-40 168.3 136 66.9
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 7.1e-40 167.9 105 78.1
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 9.2e-40 167.5 113 76.1
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.1e-39 166.4 106 79.2
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.7e-38 163.3 128 67.2
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 5.1e-38 161.8 107 75.7
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 8.6e-38 161.0 113 69.9
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 1.1e-37 160.6 113 69.9
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 3.3e-37 159.1 120 68.3
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 3.3e-37 159.1 118 66.9
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 4.3e-37 158.7 107 74.8
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 5.6e-37 158.3 130 66.2
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 9.5e-37 157.5 217 45.6
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 1.2e-36 157.1 121 70.2
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 7.6e-34 147.9 89 77.5
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 1.7e-33 146.7 127 55.9
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 3.8e-33 145.6 118 64.4
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.1e-32 144.1 118 60.2
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 1.1e-32 144.1 101 69.3
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.4e-32 143.7 88 80.7
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.1e-31 139.8 107 68.2
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 2.8e-28 129.4 81 79.0
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 6.2e-28 128.3 107 59.8
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 6.9e-27 124.8 68 85.3
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 2.0e-26 123.2 113 60.2
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.1e-24 117.5 74 78.4
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.4e-24 117.1 84 66.7
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 2.4e-24 116.3 122 46.7
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 5.4e-24 115.2 67 77.6
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 1.0e-22 110.9 84 60.7
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.9e-21 106.7 173 41.0
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 2.8e-20 102.8 89 64.0
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 1.2e-18 97.4 117 42.7
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 1.3e-17 94.0 61 73.8
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 4.9e-17 92.0 70 64.3
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 9.6e-13 77.8 45 77.8
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 8.1e-12 74.7 47 66.0
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 1.2e-10 70.9 130 39.2
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 3.2e-08 62.8 113 36.3


User provided reference genes

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