Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 5.9e-178 627.5 328 100.0
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 2.3e-174 615.5 322 99.7
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 1.0e-153 547.0 322 87.6
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.4e-147 525.8 322 83.5
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 7.0e-147 524.2 322 84.2
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 9.1e-147 523.9 322 83.2
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 5.9e-146 521.2 322 83.5
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 7.7e-146 520.8 322 83.5
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 8.5e-145 517.3 322 82.3
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 1.5e-144 516.5 322 82.9
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 2.5e-144 515.8 322 83.2
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 5.5e-144 514.6 322 82.0
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 7.2e-144 514.2 322 81.7
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 7.2e-144 514.2 322 82.0
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 2.1e-143 512.7 324 81.2
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 4.0e-142 508.4 322 80.1
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 5.2e-142 508.1 322 82.3
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 8.8e-142 507.3 332 79.2
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 2.0e-141 506.1 319 81.2
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 3.4e-141 505.4 322 80.1
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 3.4e-141 505.4 322 79.5
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 4.4e-141 505.0 332 79.5
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 7.5e-141 504.2 322 79.8
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 9.8e-141 503.8 322 79.8
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 1.3e-140 503.4 337 78.0
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 1.7e-140 503.1 320 81.6
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 1.7e-140 503.1 322 79.2
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 1.7e-140 503.1 322 80.4
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 2.2e-140 502.7 322 80.4
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 2.8e-140 502.3 320 81.2
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 2.8e-140 502.3 322 80.7
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 3.7e-140 501.9 322 79.5
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 4.9e-140 501.5 322 79.2
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 1.4e-139 500.0 322 79.5
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 3.1e-139 498.8 322 79.8
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 3.1e-139 498.8 322 79.8
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 4.1e-139 498.4 319 79.3
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 7.0e-139 497.7 320 80.9
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 1.0e-137 493.8 319 79.3
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.0e-137 493.8 319 79.3
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 1.0e-137 493.8 322 78.0
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 1.0e-137 493.8 357 74.5
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 1.7e-137 493.0 320 79.7
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 2.3e-137 492.7 320 78.8
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.9e-137 492.3 319 79.0
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 2.9e-137 492.3 322 77.6
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 5.0e-137 491.5 322 79.5
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 5.0e-137 491.5 319 78.7
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.9e-136 489.6 322 79.2
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 5.6e-136 488.0 322 78.0
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 9.5e-136 487.3 324 79.0
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 2.1e-135 486.1 322 77.6
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.8e-135 485.7 319 78.1
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 1.4e-134 483.4 322 76.4
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 2.3e-134 482.6 322 77.3
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 4.0e-134 481.9 322 77.6
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 4.0e-134 481.9 322 76.4
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 5.2e-134 481.5 322 76.7
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 6.8e-134 481.1 322 75.8
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 6.8e-134 481.1 322 76.1
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 8.9e-134 480.7 322 76.1
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 2.0e-133 479.6 322 76.7
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 2.0e-133 479.6 322 76.7
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 2.6e-133 479.2 322 76.4
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 9.8e-133 477.2 322 75.2
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 9.8e-133 477.2 322 75.2
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 1.3e-132 476.9 322 75.5
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 1.7e-132 476.5 322 74.8
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 1.7e-132 476.5 322 74.8
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 2.9e-132 475.7 322 75.5
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 1.1e-131 473.8 319 77.7
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 1.1e-131 473.8 322 75.5
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 5.4e-131 471.5 322 74.8
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 2.0e-130 469.5 324 75.9
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 2.0e-130 469.5 322 74.5
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 3.5e-130 468.8 320 75.6
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 4.6e-130 468.4 322 74.5
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 7.8e-130 467.6 322 74.8
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 7.8e-130 467.6 320 75.6
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.0e-129 467.2 324 75.3
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 1.3e-129 466.8 322 74.5
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 1.7e-129 466.5 324 74.4
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 1.7e-129 466.5 318 77.7
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 3.9e-129 465.3 322 73.9
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 3.9e-129 465.3 320 75.3
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 5.0e-129 464.9 319 75.2
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 5.0e-129 464.9 319 75.2
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 6.6e-129 464.5 322 72.7
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 8.6e-129 464.2 319 74.6
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.5e-128 463.4 319 74.9
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 9.5e-128 460.7 319 74.6
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 3.6e-127 458.8 322 74.2
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 8.0e-127 457.6 431 60.6
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 1.0e-126 457.2 322 72.4
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 1.4e-126 456.8 322 73.3
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.8e-126 456.4 318 74.8
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.6e-125 452.6 322 72.7
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 9.8e-125 450.7 321 71.3
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 1.1e-123 447.2 321 73.2
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 5.4e-123 444.9 320 69.4
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 2.0e-122 443.0 321 71.3
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 1.3e-121 440.3 321 71.7
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 3.3e-120 435.6 331 70.7
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 1.6e-119 433.3 322 71.7
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 8.1e-119 431.0 319 69.3
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 2.8e-111 406.0 393 58.0
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 8.4e-108 394.4 320 61.9
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 1.4e-107 393.7 266 75.6
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 1.9e-107 393.3 320 63.4
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.9e-105 385.6 248 80.6
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 7.3e-104 381.3 321 62.6
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 6.8e-102 374.8 319 60.5
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 9.9e-101 370.9 319 60.8
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 6.6e-97 358.2 321 57.0
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 3.4e-85 319.3 320 49.7
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 1.3e-65 254.2 183 69.4
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 1.8e-65 253.8 164 79.3
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 7.4e-64 248.4 159 81.8
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 4.7e-50 202.6 140 73.6
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 2.6e-48 196.8 132 75.8
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 8.2e-47 191.8 122 80.3
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 6.5e-44 182.2 322 32.6
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 1.1e-43 181.4 127 72.4
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 1.5e-43 181.0 321 35.2
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 3.2e-43 179.9 142 73.2
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.0e-40 170.6 175 57.7
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 1.1e-38 164.9 168 60.1
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.4e-33 147.9 160 54.4
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.8e-33 147.5 118 66.9
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 2.8e-31 140.2 375 30.1
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 6.8e-17 92.4 71 71.8
Actinidia12535 Actinidia chinensis HOM05D005394 ORTHO05D055987 3.4e-08 63.5 60 56.7
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.7e-07 60.1 134 37.3


User provided reference genes

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