Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 3.5e-175 618.2 321 100.0
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.1e-144 516.9 323 84.5
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 8.1e-140 500.7 327 82.0
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 5.4e-136 488.0 328 80.5
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-135 486.9 328 80.2
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.2e-135 486.9 331 78.9
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 3.5e-135 485.3 333 79.0
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 6.0e-135 484.6 328 79.9
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 7.8e-135 484.2 329 78.1
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 6.6e-134 481.1 325 79.4
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 8.7e-134 480.7 327 78.0
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.9e-133 479.6 329 78.4
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.5e-133 479.2 328 78.7
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 4.3e-133 478.4 327 77.7
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 7.3e-133 477.6 324 78.4
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.1e-132 476.1 328 77.7
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.8e-131 473.0 324 77.8
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 3.1e-131 472.2 324 77.2
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 6.9e-131 471.1 323 76.5
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 2.6e-130 469.2 324 75.9
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 2.6e-130 469.2 319 76.8
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 4.5e-130 468.4 319 76.5
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 5.8e-130 468.0 325 77.5
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 5.8e-130 468.0 330 77.6
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 5.8e-130 468.0 332 75.9
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.7e-129 466.5 343 73.2
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.9e-129 465.7 286 83.6
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.9e-129 465.7 320 76.2
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 6.4e-129 464.5 332 76.8
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.4e-129 464.5 319 75.5
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.1e-128 463.8 328 75.6
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.1e-128 463.8 330 75.2
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.4e-128 463.4 333 76.3
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 3.2e-128 462.2 330 75.2
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 4.2e-128 461.8 330 74.8
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 5.4e-128 461.5 323 76.2
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 5.4e-128 461.5 329 75.7
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.1e-127 459.5 330 75.5
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 3.5e-127 458.8 325 76.3
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 6.0e-127 458.0 324 75.6
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.8e-126 456.4 327 74.3
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.1e-125 453.8 331 74.3
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.5e-125 453.4 312 76.3
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.3e-125 452.2 320 75.0
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 4.3e-125 451.8 328 74.1
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 7.4e-125 451.1 333 74.2
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 7.4e-125 451.1 324 75.0
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 7.4e-125 451.1 331 71.3
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 2.1e-124 449.5 270 84.1
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.1e-123 447.2 328 73.5
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.4e-123 446.8 329 71.1
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.4e-123 446.8 335 70.7
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 6.9e-123 444.5 327 74.6
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.5e-122 443.4 328 72.0
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.5e-122 443.4 271 83.0
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.0e-122 443.0 323 72.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 3.4e-122 442.2 326 74.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 5.8e-122 441.4 297 76.4
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 7.6e-122 441.0 321 73.2
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 2.9e-121 439.1 324 73.5
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.4e-120 436.8 319 71.8
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 3.2e-120 435.6 323 73.1
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 9.3e-120 434.1 321 72.6
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.2e-119 433.7 330 72.7
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.6e-119 433.3 321 70.4
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 2.1e-119 433.0 316 73.7
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 6.0e-119 431.4 282 76.6
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 7.9e-119 431.0 321 71.0
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 5.1e-118 428.3 319 70.5
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 5.1e-118 428.3 327 70.3
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.9e-117 426.4 319 69.9
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 3.3e-117 425.6 319 69.6
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 5.6e-117 424.9 282 75.5
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 9.6e-117 424.1 319 69.0
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-116 423.7 282 75.5
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-116 423.7 282 75.5
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.6e-116 423.3 319 69.0
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.6e-116 423.3 319 69.0
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 4.8e-116 421.8 319 68.7
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 4.8e-116 421.8 319 68.7
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 6.2e-116 421.4 319 68.7
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.5e-114 416.8 323 69.7
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.4e-114 415.6 260 80.8
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 5.8e-114 414.8 282 74.8
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.9e-112 409.8 237 86.5
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.9e-112 409.8 237 86.5
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 1.9e-112 409.8 327 68.8
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 2.5e-112 409.5 330 71.5
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.0e-110 404.1 328 69.5
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 5.1e-110 401.7 231 87.9
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 1.1e-109 400.6 286 73.1
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.9e-109 399.8 324 66.7
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.1e-107 394.0 233 85.4
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.4e-107 392.9 323 68.4
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.9e-105 386.0 311 66.9
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 5.0e-105 385.2 316 67.4
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.1e-104 384.0 232 82.3
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 2.5e-104 382.9 240 78.8
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.2e-100 369.8 269 68.0
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.5e-98 363.6 267 67.8
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.7e-97 360.1 263 68.1
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 3.9e-94 349.0 320 58.8
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.8e-91 340.1 209 82.3
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 3.1e-91 339.3 264 64.8
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.6e-90 336.3 329 60.2
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.9e-86 322.4 264 58.7
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 3.1e-83 312.8 293 58.7
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 4.1e-75 285.8 253 57.7
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.2e-71 274.2 232 66.4
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 4.1e-67 259.2 310 51.6
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.2e-61 241.1 241 56.0
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 3.7e-60 236.1 198 67.7
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.8e-59 233.8 232 57.8
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 8.3e-52 208.4 155 72.9
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 5.2e-38 162.5 103 70.9
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 1.9e-24 117.5 71 78.9
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 9.3e-19 98.6 72 63.9
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.1e-08 65.1 64 60.9
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.5e-08 63.9 124 44.4


User provided reference genes

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