Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 2.1e-89 332.4 173 100.0
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 2.9e-59 232.3 188 68.1
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 3.4e-52 208.8 192 62.0
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 5.0e-51 204.9 187 61.0
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.2e-49 200.3 204 58.8
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 1.6e-49 199.9 207 56.5
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 2.7e-49 199.1 204 58.3
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 2.7e-49 199.1 204 58.3
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 3.5e-49 198.7 201 57.7
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.8e-48 196.4 176 61.9
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 3.9e-48 195.3 188 61.7
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 8.7e-48 194.1 165 62.4
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.5e-47 193.4 195 59.0
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 1.5e-47 193.4 175 61.1
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 1.9e-47 193.0 187 59.9
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.9e-47 193.0 202 56.9
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 2.5e-47 192.6 178 58.4
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 4.3e-47 191.8 199 58.3
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 9.7e-47 190.7 200 55.0
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.3e-46 190.3 186 58.1
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 1.6e-46 189.9 188 58.0
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 2.2e-46 189.5 166 64.5
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 2.8e-46 189.1 204 54.9
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 3.7e-46 188.7 187 57.8
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 8.2e-46 187.6 168 61.9
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.8e-45 186.4 188 59.6
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 3.1e-45 185.7 179 62.0
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 4.1e-45 185.3 173 59.5
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 9.0e-45 184.1 190 58.9
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 1.2e-44 183.7 209 51.7
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 1.2e-44 183.7 179 58.7
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 2.0e-44 183.0 179 59.2
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 3.4e-44 182.2 173 60.1
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 4.5e-44 181.8 183 59.6
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.9e-44 181.4 189 58.2
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 5.9e-44 181.4 173 59.5
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 5.9e-44 181.4 176 58.5
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.0e-43 180.6 189 56.6
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.7e-43 179.9 198 54.0
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 2.9e-43 179.1 198 54.0
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-42 176.8 200 54.5
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-42 176.8 200 54.5
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.9e-42 176.4 184 59.8
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 3.2e-42 175.6 193 53.9
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 5.5e-42 174.9 172 59.9
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.2e-42 174.5 172 57.0
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 7.2e-42 174.5 190 56.3
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 7.2e-42 174.5 176 58.0
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 1.2e-41 173.7 190 55.3
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 1.2e-41 173.7 185 57.3
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.6e-41 173.3 185 55.7
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 2.7e-41 172.6 173 55.5
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 3.6e-41 172.2 188 53.2
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 3.6e-41 172.2 190 54.2
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 4.6e-41 171.8 183 54.6
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 7.9e-41 171.0 200 53.5
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 1.0e-40 170.6 196 51.5
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 1.0e-40 170.6 188 55.3
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.8e-40 169.9 188 55.9
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 2.3e-40 169.5 200 54.0
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 3.0e-40 169.1 204 51.5
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 3.0e-40 169.1 196 52.6
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 3.9e-40 168.7 189 52.4
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 5.1e-40 168.3 182 54.4
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 6.7e-40 167.9 184 55.4
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 6.7e-40 167.9 189 55.0
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 2.5e-39 166.0 193 50.3
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 3.3e-39 165.6 195 50.8
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 3.3e-39 165.6 187 52.9
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 3.3e-39 165.6 185 51.4
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 3.3e-39 165.6 201 48.8
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 5.7e-39 164.9 190 52.6
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 1.7e-38 163.3 201 49.8
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 1.7e-38 163.3 206 51.5
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 1.7e-38 163.3 205 49.8
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 2.2e-38 162.9 178 53.4
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 2.8e-38 162.5 178 53.4
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 3.7e-38 162.2 181 54.1
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 4.8e-38 161.8 212 49.5
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 4.8e-38 161.8 212 48.1
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 6.3e-38 161.4 178 54.5
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 6.3e-38 161.4 178 54.5
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.8e-37 159.8 177 52.5
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 4.1e-37 158.7 166 56.0
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 9.1e-37 157.5 176 51.7
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 1.2e-36 157.1 176 51.1
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 1.5e-36 156.8 180 52.8
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 2.6e-36 156.0 162 58.0
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 3.4e-36 155.6 182 52.2
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 3.4e-36 155.6 175 53.1
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 4.5e-36 155.2 171 52.0
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 4.5e-36 155.2 185 49.2
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 5.9e-36 154.8 173 53.8
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 7.7e-36 154.5 174 54.6
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 1.0e-35 154.1 195 49.2
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 2.9e-35 152.5 177 50.8
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 1.1e-34 150.6 200 47.0
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.9e-34 149.8 181 50.8
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 1.9e-34 149.8 184 50.5
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 1.9e-34 149.8 204 47.5
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 2.5e-34 149.4 196 47.4
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 3.2e-34 149.1 180 48.9
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 4.2e-34 148.7 246 42.7
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 4.2e-34 148.7 246 42.7
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 2.7e-33 146.0 246 40.2
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 3.6e-33 145.6 166 51.2
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.0e-32 144.1 179 48.6
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 7.4e-31 137.9 148 56.8
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 7.4e-31 137.9 166 50.0
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 7.4e-31 137.9 166 50.0
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 4.8e-30 135.2 138 54.3
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 5.0e-27 125.2 164 46.3
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.1e-26 124.0 160 46.9
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 9.4e-26 120.9 141 53.2
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 1.8e-24 116.7 161 41.6
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 3.3e-23 112.5 141 49.6
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 3.3e-23 112.5 177 43.5
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 4.8e-22 108.6 149 46.3
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-21 107.1 121 56.2
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.3e-21 105.1 170 44.7
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 9.1e-21 104.4 168 39.9
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 2.0e-20 103.2 143 47.6
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 5.9e-20 101.7 126 54.0
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 1.0e-19 100.9 142 47.2
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 1.5e-18 97.1 150 37.3
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 8.0e-17 91.3 190 33.7
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 4.0e-16 89.0 158 35.4
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.0e-15 86.7 67 62.7
Gohir.1Z049409 Gossypium hirsutum HOM05D005391 ORTHO05D006694 2.0e-15 86.7 115 47.8
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 2.0e-15 86.7 167 35.9
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 5.9e-12 75.1 112 42.0
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 1.7e-11 73.6 88 47.7
Hund13632 Selenicereus undatus HOM05D005391 ORTHO05D006694 1.4e-08 63.9 139 33.1


User provided reference genes

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