Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 1.2e-86 323.2 168 100.0
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.4e-42 176.8 171 62.6
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 2.6e-41 172.6 176 60.8
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 7.7e-41 171.0 176 60.8
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 8.5e-40 167.5 172 61.6
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 1.9e-39 166.4 169 58.0
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 2.7e-38 162.5 173 57.2
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 6.1e-38 161.4 171 57.9
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 1.7e-35 153.3 139 64.0
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 8.2e-35 151.0 171 57.9
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 8.2e-35 151.0 173 55.5
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.1e-34 150.6 171 57.9
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.8e-34 149.8 179 57.5
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 2.4e-34 149.4 168 56.0
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 7.7e-33 144.4 162 55.6
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 1.3e-32 143.7 170 52.9
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 2.2e-32 142.9 175 53.1
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.9e-32 142.5 173 52.6
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.8e-32 142.1 166 54.8
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 5.0e-32 141.7 171 56.1
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.5e-32 141.4 174 51.7
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.5e-32 141.4 174 51.7
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 1.5e-31 140.2 168 53.0
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 1.9e-31 139.8 176 50.6
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 4.2e-31 138.7 167 52.7
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 5.5e-31 138.3 171 53.8
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 5.5e-31 138.3 169 51.5
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.6e-30 136.7 173 52.0
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 1.4e-29 133.7 166 54.8
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 6.8e-29 131.3 159 53.5
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 8.8e-29 131.0 176 50.0
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 1.8e-26 123.2 157 52.9
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.9e-24 115.9 173 46.2
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 5.0e-24 115.2 164 47.0
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 6.5e-24 114.8 173 44.5
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.2e-23 112.1 173 43.9
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.6e-22 109.0 172 44.8
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.6e-22 109.0 161 46.6
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 1.8e-21 106.7 165 44.8
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.0e-20 103.2 128 50.8
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.6e-20 102.8 109 53.2
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 7.5e-20 101.3 175 41.7
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.7e-19 100.1 156 47.4
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 1.7e-19 100.1 156 46.8
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 4.9e-19 98.6 166 42.8
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.8e-18 96.7 165 42.4
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 4.1e-18 95.5 153 47.1
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 1.3e-16 90.5 157 44.6
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 2.3e-16 89.7 154 40.9
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 3.8e-16 89.0 189 39.7
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 4.3e-15 85.5 169 40.8
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 2.1e-14 83.2 181 41.4
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 4.7e-14 82.0 172 37.2
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 8.0e-14 81.3 157 41.4
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 1.0e-13 80.9 150 40.0
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 1.0e-13 80.9 169 38.5
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.0e-13 80.9 138 44.2
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 2.3e-13 79.7 164 37.8
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 3.0e-13 79.3 168 41.7
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 5.2e-13 78.6 116 44.0
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 2.6e-12 76.3 170 39.4
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 4.4e-12 75.5 149 39.6
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 5.7e-12 75.1 172 36.0
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 9.8e-12 74.3 152 38.2
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 9.8e-12 74.3 88 50.0
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 9.8e-12 74.3 154 37.7
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 2.2e-11 73.2 119 44.5
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 5.9e-09 65.1 172 36.6
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 7.8e-09 64.7 176 35.2
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 3.0e-08 62.8 176 34.1
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 4.3e-07 58.9 210 32.9
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 8.0e-06 54.7 188 31.9


User provided reference genes

Program Settings