Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 3.5e-104 382.1 190 100.0
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 1.6e-40 170.6 201 48.8
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 3.3e-38 162.9 222 47.3
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 3.3e-38 162.9 207 48.3
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 3.7e-37 159.5 205 48.3
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 6.3e-37 158.7 209 50.7
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 4.1e-36 156.0 216 48.1
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 7.0e-36 155.2 211 45.0
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 2.0e-35 153.7 207 45.9
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 1.3e-34 151.0 208 48.1
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 1.7e-34 150.6 213 44.6
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 1.2e-32 144.4 211 44.5
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.6e-32 144.1 211 45.0
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 2.7e-32 143.3 211 44.5
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 2.7e-32 143.3 221 43.0
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 6.1e-32 142.1 211 45.5
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 6.1e-32 142.1 211 44.1
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 4.0e-31 139.4 209 44.0
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 8.8e-31 138.3 215 47.0
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 1.5e-30 137.5 210 43.8
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 2.6e-30 136.7 213 41.3
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 3.7e-29 132.9 211 43.6
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 4.8e-29 132.5 211 43.6
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 7.0e-28 128.6 211 43.1
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 9.1e-28 128.3 210 43.3
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 5.0e-26 122.5 208 39.9
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 1.5e-25 120.9 201 42.8
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 5.5e-25 119.0 215 40.0
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 7.2e-25 118.6 210 41.4
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 9.4e-25 118.2 193 40.4
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 4.7e-24 115.9 210 40.0
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 8.0e-24 115.2 212 40.6
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 1.8e-23 114.0 213 41.3
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 1.8e-23 114.0 212 41.0
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 1.8e-23 114.0 206 40.3
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 3.0e-23 113.2 201 39.3
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 3.0e-23 113.2 213 40.8
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 4.0e-23 112.8 216 37.5
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 6.8e-23 112.1 208 39.4
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 1.5e-22 110.9 218 40.4
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 2.0e-22 110.5 200 41.0
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 3.4e-22 109.8 202 38.1
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 5.7e-22 109.0 211 40.3
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 5.7e-22 109.0 215 39.5
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 1.7e-21 107.5 202 37.1
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.7e-21 107.5 209 38.3
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 2.8e-21 106.7 202 37.1
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 3.7e-21 106.3 207 38.2
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 4.8e-21 105.9 201 41.8
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 4.8e-21 105.9 229 37.1
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 4.8e-21 105.9 189 39.2
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 4.8e-21 105.9 212 39.6
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 8.3e-21 105.1 208 37.5
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 1.1e-20 104.8 216 35.2
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 1.4e-20 104.4 196 37.2
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 1.4e-20 104.4 196 37.2
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 1.8e-20 104.0 197 37.1
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 1.8e-20 104.0 199 39.2
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 1.8e-20 104.0 219 36.1
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 1.8e-20 104.0 215 35.8
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 3.1e-20 103.2 215 35.3
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 5.4e-20 102.4 217 35.5
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 5.4e-20 102.4 195 40.5
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 7.0e-20 102.1 218 37.6
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 9.1e-20 101.7 204 38.7
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 9.1e-20 101.7 198 37.9
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 1.2e-19 101.3 195 37.9
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 1.6e-19 100.9 203 36.5
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.5e-19 99.8 202 40.6
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 4.5e-19 99.4 212 38.7
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 7.7e-19 98.6 202 41.1
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 1.0e-18 98.2 196 36.7
C01p11780 Brassica napus HOM05D006310 ORTHO05D007768 2.3e-18 97.1 190 38.9
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 2.3e-18 97.1 201 36.3
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 2.9e-18 96.7 190 38.9
BolC1t01140H Brassica oleracea HOM05D006310 ORTHO05D007768 2.9e-18 96.7 190 38.9
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 2.9e-18 96.7 215 37.7
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.8e-18 96.3 200 38.0
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 3.8e-18 96.3 193 37.3
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 1.1e-17 94.7 187 38.5
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 1.1e-17 94.7 200 36.0
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 1.5e-17 94.4 192 39.6
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 1.9e-17 94.0 206 34.5
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 1.9e-17 94.0 213 33.8
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.3e-17 93.2 205 37.6
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 7.2e-17 92.0 199 36.2
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 9.5e-17 91.7 213 36.6
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 1.2e-16 91.3 193 38.3
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 2.8e-16 90.1 203 36.0
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 4.7e-16 89.4 191 37.7
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 6.1e-16 89.0 195 36.4
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 1.4e-15 87.8 211 35.1
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 2.6e-14 83.6 209 32.5
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.4e-14 82.8 193 35.2
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 1.3e-13 81.3 193 34.7
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 1.7e-13 80.9 207 35.3
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.8e-13 80.1 193 34.7
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 6.3e-13 79.0 197 34.0
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 8.3e-13 78.6 198 31.3
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 1.8e-12 77.4 224 30.8
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 1.8e-12 77.4 206 34.5
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 4.1e-12 76.3 220 30.5
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 7.0e-12 75.5 225 30.7
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 7.0e-12 75.5 193 33.7
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 7.0e-12 75.5 193 33.7
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 3.5e-11 73.2 193 33.2
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 3.9e-10 69.7 194 32.0
Ah.07g200600 Amaranthus hybridus HOM05D006310 ORTHO05D007768 5.0e-10 69.3 189 29.6
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 1.1e-09 68.2 73 47.9
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 1.9e-09 67.4 217 31.3
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 4.3e-09 66.2 50 64.0
CSS0008588 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 5.2e-07 59.3 200 28.0
Eucgr.E00268 Eucalyptus grandis HOM05D006310 ORTHO05D007768 6.8e-07 58.9 62 45.2
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 6.8e-07 58.9 41 61.0
Eucgr.E00267 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.2e-06 58.2 52 51.9


User provided reference genes

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