Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 2.5e-43 178.7 112 100.0
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 1.7e-28 129.4 109 64.2
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 5.0e-28 127.9 112 61.6
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.1e-27 126.7 112 61.6
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.1e-27 126.7 112 70.5
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.1e-27 126.7 112 62.5
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.5e-27 125.6 113 60.2
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 4.2e-27 124.8 112 58.0
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 9.4e-27 123.6 112 61.6
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 9.4e-27 123.6 113 59.3
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 9.4e-27 123.6 113 59.3
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 9.4e-27 123.6 113 59.3
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 2.1e-26 122.5 112 69.6
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 1.0e-25 120.2 112 57.1
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 1.8e-25 119.4 112 67.9
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 1.8e-25 119.4 113 58.4
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 1.8e-25 119.4 114 63.2
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.3e-25 119.0 113 57.5
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.3e-25 119.0 113 57.5
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 3.0e-25 118.6 79 70.9
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 3.0e-25 118.6 113 57.5
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 3.0e-25 118.6 113 57.5
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 5.2e-25 117.9 112 67.0
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 2.6e-24 115.5 107 64.5
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 3.3e-24 115.2 96 64.6
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 5.7e-24 114.4 79 68.4
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 7.4e-24 114.0 113 55.8
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 1.7e-23 112.8 113 61.1
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 3.7e-23 111.7 79 67.1
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 3.7e-23 111.7 80 68.8
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 4.8e-23 111.3 79 70.9
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 1.1e-22 110.2 107 59.8
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 1.1e-22 110.2 81 69.1
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 1.1e-22 110.2 82 68.3
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 1.4e-22 109.8 74 68.9
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 2.4e-22 109.0 78 66.7
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 4.1e-22 108.2 107 57.0
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 4.1e-22 108.2 90 64.4
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 5.3e-22 107.8 64 78.1
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 9.1e-22 107.1 114 55.3
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 1.2e-21 106.7 92 65.2
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 1.6e-21 106.3 107 62.6
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 2.0e-21 105.9 67 73.1
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 2.0e-21 105.9 76 67.1
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 2.6e-21 105.5 113 60.2
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 2.6e-21 105.5 67 74.6
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 4.5e-21 104.8 112 56.2
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 4.5e-21 104.8 116 53.4
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 5.9e-21 104.4 61 80.3
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 7.7e-21 104.0 90 74.4
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 7.7e-21 104.0 72 70.8
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 1.7e-20 102.8 81 63.0
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 1.7e-20 102.8 62 75.8
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 2.2e-20 102.4 61 77.0
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 2.2e-20 102.4 76 65.8
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 2.9e-20 102.1 81 61.7
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 3.8e-20 101.7 100 63.0
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 3.8e-20 101.7 75 66.7
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 3.8e-20 101.7 74 63.5
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 6.5e-20 100.9 114 59.6
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 6.5e-20 100.9 114 59.6
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 8.5e-20 100.5 112 61.6
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 8.5e-20 100.5 92 69.6
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.1e-19 100.1 62 74.2
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 1.1e-19 100.1 93 59.1
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 1.5e-19 99.8 61 75.4
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 3.2e-19 98.6 100 62.0
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 3.2e-19 98.6 104 51.9
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 4.2e-19 98.2 73 60.3
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 7.2e-19 97.4 68 67.6
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 7.2e-19 97.4 90 58.9
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 2.7e-18 95.5 101 52.5
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 3.6e-18 95.1 98 61.2
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 6.1e-18 94.4 96 51.0
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 8.0e-18 94.0 81 53.1
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 8.0e-18 94.0 59 72.9
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 4.0e-17 91.7 72 59.7
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 5.2e-17 91.3 93 57.0
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 6.7e-17 90.9 65 66.2
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 6.7e-17 90.9 65 66.2
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 1.5e-16 89.7 126 46.0
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 7.5e-16 87.4 102 48.0
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 9.7e-16 87.0 77 58.4
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 9.7e-16 87.0 89 65.2
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 1.3e-15 86.7 106 46.2
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 2.8e-15 85.5 69 58.0
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 3.7e-15 85.1 74 59.5
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 3.7e-15 85.1 61 68.9
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 1.1e-14 83.6 54 75.9
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 3.1e-14 82.0 55 69.1
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 1.6e-13 79.7 52 69.2
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 3.5e-13 78.6 59 72.9
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 4.5e-13 78.2 60 65.0
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 1.3e-12 76.6 58 63.8
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 1.3e-12 76.6 50 72.0
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 3.8e-12 75.1 61 59.0
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 1.1e-11 73.6 65 53.8
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 1.5e-11 73.2 55 60.0
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 7.2e-11 70.9 59 57.6
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 3.6e-10 68.6 52 61.5
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 9.8e-08 60.5 37 73.0


User provided reference genes

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