Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1572 Acer truncatum HOM05D003770 ORTHO05D004424 2.9e-77 292.0 163 100.0
TWI81G0504 Tripterygium wilfordii HOM05D003770 ORTHO05D004424 1.1e-63 246.9 159 77.4
Manes.17G006674 Manihot esculenta HOM05D003770 ORTHO05D004424 4.1e-63 245.0 159 77.4
Thecc.03G313800 Theobroma cacao HOM05D003770 ORTHO05D004424 3.4e-62 241.9 161 77.6
Potri.003G099400 Populus trichocarpa HOM05D003770 ORTHO05D004424 1.0e-61 240.4 159 77.4
CAN.G773.20 Capsicum annuum HOM05D003770 ORTHO05D004424 1.3e-61 240.0 159 74.8
Gorai.008G222400 Gossypium raimondii HOM05D003770 ORTHO05D004424 2.2e-61 239.2 159 76.1
Duzib068G0068 Durio zibethinus HOM05D003770 ORTHO05D004424 2.9e-61 238.8 159 75.5
Duzib084G1234 Durio zibethinus HOM05D003770 ORTHO05D004424 5.0e-61 238.0 165 75.2
Cpa.g.sc147.1 Carica papaya HOM05D003770 ORTHO05D004424 8.5e-61 237.3 159 75.5
Gohir.A12G204600 Gossypium hirsutum HOM05D003770 ORTHO05D004424 8.5e-61 237.3 159 75.5
COL.COLO4_16898 Corchorus olitorius HOM05D003770 ORTHO05D004424 1.1e-60 236.9 160 77.5
Gohir.D12G207000 Gossypium hirsutum HOM05D003770 ORTHO05D004424 1.9e-60 236.1 162 76.5
Potri.001G134000 Populus trichocarpa HOM05D003770 ORTHO05D004424 2.5e-60 235.7 159 75.5
Sabra03G0067500 Salix brachista HOM05D003770 ORTHO05D004424 3.2e-60 235.3 159 75.5
CiPaw.11G100900 Carya illinoinensis HOM05D003770 ORTHO05D004424 5.5e-60 234.6 159 73.6
Sabra01G0103600 Salix brachista HOM05D003770 ORTHO05D004424 1.2e-59 233.4 159 74.2
CiPaw.12G070000 Carya illinoinensis HOM05D003770 ORTHO05D004424 1.6e-59 233.0 161 73.3
TAR629G0526 Trochodendron aralioides HOM05D003770 ORTHO05D004424 1.6e-59 233.0 159 73.0
Dinv29027 Davidia involucrata HOM05D003770 ORTHO05D004424 2.7e-59 232.3 166 75.9
QL12p000321 Quercus lobata HOM05D003770 ORTHO05D004424 2.7e-59 232.3 165 73.3
Peaxi162Scf00879g00019 Petunia axillaris HOM05D003770 ORTHO05D004424 3.6e-59 231.9 159 73.6
PGSC0003DMG400009317 Solanum tuberosum HOM05D003770 ORTHO05D004424 4.7e-59 231.5 159 73.6
Nn1g01916 Nelumbo nucifera HOM05D003770 ORTHO05D004424 6.1e-59 231.1 159 74.2
Manes.15G185100 Manihot esculenta HOM05D003770 ORTHO05D004424 7.9e-59 230.7 159 73.0
HanXRQChr13g0404801 Helianthus annuus HOM05D003770 ORTHO05D004424 1.8e-58 229.6 159 73.6
HanXRQChr02g0050031 Helianthus annuus HOM05D003770 ORTHO05D004424 2.3e-58 229.2 163 73.0
vmacro22044 Vaccinium macrocarpon HOM05D003770 ORTHO05D004424 5.1e-58 228.0 159 73.0
VMungo1215G0689 Vigna mungo HOM05D003770 ORTHO05D004424 5.1e-58 228.0 160 72.5
Duzib205G1159 Durio zibethinus HOM05D003770 ORTHO05D004424 8.8e-58 227.3 159 73.6
Phvul.002G133100 Phaseolus vulgaris HOM05D003770 ORTHO05D004424 8.8e-58 227.3 165 71.5
TWI60G0039 Tripterygium wilfordii HOM05D003770 ORTHO05D004424 8.8e-58 227.3 160 76.9
FAN04G1074 Fragaria x ananassa HOM05D003770 ORTHO05D004424 1.1e-57 226.9 160 73.8
FAN08G1257 Fragaria x ananassa HOM05D003770 ORTHO05D004424 1.1e-57 226.9 160 73.8
Glyma.01G010200 Glycine max HOM05D003770 ORTHO05D004424 1.1e-57 226.9 162 73.5
Glyma.09G210900 Glycine max HOM05D003770 ORTHO05D004424 1.5e-57 226.5 160 73.1
Lj2g0001675 Lotus japonicus HOM05D003770 ORTHO05D004424 2.0e-57 226.1 159 72.3
MBI04_g36021_MAGBIO Magnolia biondii HOM05D003770 ORTHO05D004424 2.6e-57 225.7 159 71.7
Nitab4.5_0000543g0160 Nicotiana tabacum HOM05D003770 ORTHO05D004424 2.6e-57 225.7 159 71.7
RcHm_v2.0_Chr7g0212791 Rosa chinensis HOM05D003770 ORTHO05D004424 2.6e-57 225.7 160 73.1
Aqoxy3G02118 Aquilegia oxysepala HOM05D003770 ORTHO05D004424 3.3e-57 225.3 165 69.7
FAN13G3207 Fragaria x ananassa HOM05D003770 ORTHO05D004424 3.3e-57 225.3 160 73.1
Nn3g19345 Nelumbo nucifera HOM05D003770 ORTHO05D004424 3.3e-57 225.3 165 70.3
Ca_25153_v3 Cicer arietinum L. HOM05D003770 ORTHO05D004424 5.7e-57 224.6 161 73.3
FvH4_5g23520 Fragaria vesca HOM05D003770 ORTHO05D004424 5.7e-57 224.6 160 73.1
FAN18G3344 Fragaria x ananassa HOM05D003770 ORTHO05D004424 5.7e-57 224.6 160 73.1
FAN18G4499 Fragaria x ananassa HOM05D003770 ORTHO05D004424 5.7e-57 224.6 160 73.1
Oeu002044.1 Olea europaea HOM05D003770 ORTHO05D004424 5.7e-57 224.6 159 81.8
Lalb_Chr16g0380901 Lupinus albus HOM05D003770 ORTHO05D004424 7.4e-57 224.2 161 72.0
TPR.G9091 Trifolium pratense HOM05D003770 ORTHO05D004424 7.4e-57 224.2 160 73.8
Lsat_1_v5_gn_6_17740 Lactuca sativa HOM05D003770 ORTHO05D004424 9.7e-57 223.8 161 75.2
PSO063G0145 Papaver somniferum HOM05D003770 ORTHO05D004424 9.7e-57 223.8 159 73.0
Ciclev10001344m.g Citrus clementina HOM05D003770 ORTHO05D004424 1.3e-56 223.4 154 79.9
Gohir.D03G177400 Gossypium hirsutum HOM05D003770 ORTHO05D004424 1.3e-56 223.4 161 72.7
Solyc08g076220.3 Solanum lycopersicum HOM05D003770 ORTHO05D004424 1.3e-56 223.4 159 72.3
Gorai.003G186600 Gossypium raimondii HOM05D003770 ORTHO05D004424 1.7e-56 223.0 161 72.7
Cfa012551 Carpinus fangiana HOM05D003770 ORTHO05D004424 2.8e-56 222.2 161 75.8
CDE06G1725 Ceratophyllum demersum HOM05D003770 ORTHO05D004424 2.8e-56 222.2 159 70.4
Medtr5g027530 Medicago truncatula HOM05D003770 ORTHO05D004424 2.8e-56 222.2 161 77.6
CANSAT21G0558 Cannabis sativa HOM05D003770 ORTHO05D004424 3.7e-56 221.9 170 69.4
Lsat_1_v5_gn_6_73360 Lactuca sativa HOM05D003770 ORTHO05D004424 3.7e-56 221.9 163 71.2
Nitab4.5_0006395g0030 Nicotiana tabacum HOM05D003770 ORTHO05D004424 4.8e-56 221.5 159 71.1
PSO782G4140 Papaver somniferum HOM05D003770 ORTHO05D004424 4.8e-56 221.5 159 71.7
Rhsim07G0134900 Rhododendron simsii HOM05D003770 ORTHO05D004424 4.8e-56 221.5 161 70.8
Sed0022644 Sechium edule HOM05D003770 ORTHO05D004424 4.8e-56 221.5 161 71.4
MSTRG.25705 Avicennia marina HOM05D003770 ORTHO05D004424 6.3e-56 221.1 159 71.7
Dinv06903 Davidia involucrata HOM05D003770 ORTHO05D004424 6.3e-56 221.1 159 79.9
HanXRQChr03g0082041 Helianthus annuus HOM05D003770 ORTHO05D004424 6.3e-56 221.1 159 71.7
Eucgr.E01261 Eucalyptus grandis HOM05D003770 ORTHO05D004424 8.2e-56 220.7 159 71.1
Gohir.A03G000019 Gossypium hirsutum HOM05D003770 ORTHO05D004424 8.2e-56 220.7 161 72.0
MSTRG.11897 Avicennia marina HOM05D003770 ORTHO05D004424 1.1e-55 220.3 159 69.8
DCAR_004263 Daucus carota HOM05D003770 ORTHO05D004424 1.1e-55 220.3 159 71.7
Oeu061069.1 Olea europaea HOM05D003770 ORTHO05D004424 1.1e-55 220.3 159 80.5
CDE03G0017 Ceratophyllum demersum HOM05D003770 ORTHO05D004424 1.4e-55 219.9 159 69.8
CANSAT21G0653 Cannabis sativa HOM05D003770 ORTHO05D004424 2.4e-55 219.2 169 74.6
Lalb_Chr05g0215611 Lupinus albus HOM05D003770 ORTHO05D004424 2.4e-55 219.2 160 70.6
Haze_08106 Corylus avellana HOM05D003770 ORTHO05D004424 4.1e-55 218.4 166 72.3
Nitab4.5_0003152g0030 Nicotiana tabacum HOM05D003770 ORTHO05D004424 5.3e-55 218.0 159 69.8
Hma1.2p1_1137F.1_g260650 Hydrangea macrophylla HOM05D003770 ORTHO05D004424 7.0e-55 217.6 164 71.3
ClCG07G002220 Citrullus lanatus HOM05D003770 ORTHO05D004424 9.1e-55 217.2 168 69.0
DCAR_008201 Daucus carota HOM05D003770 ORTHO05D004424 1.2e-54 216.9 159 71.7
Migut.E01330 Erythranthe guttata HOM05D003770 ORTHO05D004424 1.5e-54 216.5 163 73.6
CSS0041235 Camellia sinensis var. sinensis HOM05D003770 ORTHO05D004424 2.6e-54 215.7 161 70.2
Sed0013554 Sechium edule HOM05D003770 ORTHO05D004424 2.6e-54 215.7 160 71.2
TAR374G0482 Trochodendron aralioides HOM05D003770 ORTHO05D004424 2.6e-54 215.7 161 70.2
Actinidia27273 Actinidia chinensis HOM05D003770 ORTHO05D004424 3.5e-54 215.3 159 69.8
CSS0008149 Camellia sinensis var. sinensis HOM05D003770 ORTHO05D004424 3.5e-54 215.3 160 70.6
Psat2g140680 Pisum sativum HOM05D003770 ORTHO05D004424 3.5e-54 215.3 160 69.4
MELO3C026722.2 Cucumis melo HOM05D003770 ORTHO05D004424 4.5e-54 214.9 170 69.4
Nitab4.5_0001770g0170 Nicotiana tabacum HOM05D003770 ORTHO05D004424 4.5e-54 214.9 159 68.6
Hma1.2p1_0803F.1_g220690 Hydrangea macrophylla HOM05D003770 ORTHO05D004424 7.7e-54 214.2 164 70.7
Prupe.5G024600 Prunus persica HOM05D003770 ORTHO05D004424 1.0e-53 213.8 167 68.9
CSS0016333 Camellia sinensis var. sinensis HOM05D003770 ORTHO05D004424 1.3e-53 213.4 160 70.6
Lj8A318T48 Lonicera japonica HOM05D003770 ORTHO05D004424 2.9e-53 212.2 159 71.1
HPP92_020819 Vanilla planifolia HOM05D003770 ORTHO05D004424 8.5e-53 210.7 159 67.3
CDE02G1660 Ceratophyllum demersum HOM05D003770 ORTHO05D004424 2.5e-52 209.1 159 67.9
CsaV3_3G030440 Cucumis sativus L. HOM05D003770 ORTHO05D004424 2.5e-52 209.1 170 71.2
PGR031G2638 Punica granatum HOM05D003770 ORTHO05D004424 5.5e-52 208.0 161 70.2
arahy.Tifrunner.gnm1.ann1.6KVT94 Arachis hypogaea HOM05D003770 ORTHO05D004424 9.4e-52 207.2 165 73.3
arahy.Tifrunner.gnm1.ann1.8L38IN Arachis hypogaea HOM05D003770 ORTHO05D004424 9.4e-52 207.2 165 73.3
MELO3C013811.2 Cucumis melo HOM05D003770 ORTHO05D004424 9.4e-52 207.2 157 64.3
SGA_v2.0_scaffold111G31382 Striga asiatica HOM05D003770 ORTHO05D004424 1.6e-51 206.5 159 66.7
CsaV3_3G001220 Cucumis sativus L. HOM05D003770 ORTHO05D004424 4.7e-51 204.9 157 63.7
EL10Ac5g11979 Beta vulgaris HOM05D003770 ORTHO05D004424 6.1e-51 204.5 164 66.5
MD00G1068500 Malus domestica HOM05D003770 ORTHO05D004424 6.1e-51 204.5 163 68.1
Hund14389 Selenicereus undatus HOM05D003770 ORTHO05D004424 8.0e-51 204.1 163 65.6
AUR62007378 Chenopodium quinoa HOM05D003770 ORTHO05D004424 1.4e-50 203.4 168 66.1
AUR62018610 Chenopodium quinoa HOM05D003770 ORTHO05D004424 3.9e-50 201.8 167 65.3
Actinidia14766 Actinidia chinensis HOM05D003770 ORTHO05D004424 5.2e-50 201.4 159 66.7
Os02g0698000 Oryza sativa ssp. japonica HOM05D003770 ORTHO05D004424 2.0e-49 199.5 159 63.5
Zm00001eb188120 Zea mays HOM05D003770 ORTHO05D004424 2.0e-49 199.5 164 65.2
MD06G1023500 Malus domestica HOM05D003770 ORTHO05D004424 2.6e-49 199.1 160 68.1
SalBow1G3665 Salvia bowleyana HOM05D003770 ORTHO05D004424 4.4e-49 198.4 163 65.6
Zm00001eb251520 Zea mays HOM05D003770 ORTHO05D004424 4.4e-49 198.4 159 65.4
ClCG10G001180 Citrullus lanatus HOM05D003770 ORTHO05D004424 7.4e-49 197.6 152 64.5
Eucgr.D02625 Eucalyptus grandis HOM05D003770 ORTHO05D004424 3.7e-48 195.3 166 64.5
ECA233G1784 Erigeron canadensis HOM05D003770 ORTHO05D004424 2.4e-47 192.6 96 96.9
PGR042G3493 Punica granatum HOM05D003770 ORTHO05D004424 7.0e-47 191.0 158 65.8
unitig_32.g10970 Utricularia gibba HOM05D003770 ORTHO05D004424 7.0e-47 191.0 97 92.8
Sc07g0008420 Simmondsia chinensis HOM05D003770 ORTHO05D004424 9.1e-47 190.7 100 91.0
THA.LOC104812730 Tarenaya hassleriana HOM05D003770 ORTHO05D004424 9.1e-47 190.7 100 91.0
SMO298G0021 Selaginella moellendorffii HOM05D003770 ORTHO05D004424 1.2e-46 190.3 101 90.1
Thhalv10007801m.g Eutrema salsugineum HOM05D003770 ORTHO05D004424 2.6e-46 189.1 97 93.8
Aa31LG2G13940 Aethionema arabicum HOM05D003770 ORTHO05D004424 4.5e-46 188.3 97 93.8
CARHR031410 Cardamine hirsuta HOM05D003770 ORTHO05D004424 1.0e-45 187.2 97 92.8
CBR_g39737 Chara braunii HOM05D003770 ORTHO05D004424 1.0e-45 187.2 99 88.9
Sopen08g024860 Solanum pennellii HOM05D003770 ORTHO05D004424 1.7e-45 186.4 97 91.8
BcaB07g32867 Brassica carinata HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BcaC05g27231 Brassica carinata HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BcaC05g27932 Brassica carinata HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BcaC07g37635 Brassica carinata HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
A05p25300 Brassica napus HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
A09p34110 Brassica napus HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
C05p31460 Brassica napus HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
C05p39370 Brassica napus HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BolC5t31869H Brassica oleracea HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BolC5t32673H Brassica oleracea HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BraA05t21415Z Brassica rapa HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
BraA09t38959Z Brassica rapa HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
Sp1g27720 Schrenkiella parvula HOM05D003770 ORTHO05D004424 2.2e-45 186.0 97 90.7
THA.LOC104798502 Tarenaya hassleriana HOM05D003770 ORTHO05D004424 2.2e-45 186.0 159 64.2
BcaB04g18001 Brassica carinata HOM05D003770 ORTHO05D004424 5.0e-45 184.9 159 65.4
A08p09370 Brassica napus HOM05D003770 ORTHO05D004424 5.0e-45 184.9 159 65.4
BraA08t32935Z Brassica rapa HOM05D003770 ORTHO05D004424 5.0e-45 184.9 159 65.4
TAR622G0569 Trochodendron aralioides HOM05D003770 ORTHO05D004424 5.0e-45 184.9 99 87.9
TAR697G0002 Trochodendron aralioides HOM05D003770 ORTHO05D004424 5.0e-45 184.9 99 87.9
CDE11G0445 Ceratophyllum demersum HOM05D003770 ORTHO05D004424 8.5e-45 184.1 159 62.3
vmacro23512 Vaccinium macrocarpon HOM05D003770 ORTHO05D004424 8.5e-45 184.1 159 62.9
BolC8t48008H Brassica oleracea HOM05D003770 ORTHO05D004424 1.1e-44 183.7 97 89.7
Carub.0001s3038 Capsella rubella HOM05D003770 ORTHO05D004424 2.5e-44 182.6 159 63.5
MBI19_g21088_MAGBIO Magnolia biondii HOM05D003770 ORTHO05D004424 2.5e-44 182.6 97 86.6
AL1G46130 Arabidopsis lyrata HOM05D003770 ORTHO05D004424 3.2e-44 182.2 159 64.2
AT1G32060 Arabidopsis thaliana HOM05D003770 ORTHO05D004424 3.2e-44 182.2 159 63.5
Pp3c18_7120 Physcomitrium patens HOM05D003770 ORTHO05D004424 3.2e-44 182.2 99 86.9
AagrBONN_evm.TU.Sc2ySwM_117.3106 Anthoceros agrestis HOM05D003770 ORTHO05D004424 4.2e-44 181.8 99 86.9
ATR0829G012 Amborella trichopoda HOM05D003770 ORTHO05D004424 5.5e-44 181.4 166 60.2
Mapoly0012s0175 Marchantia polymorpha HOM05D003770 ORTHO05D004424 5.5e-44 181.4 101 85.1
SEGI_11015 Sequoiadendron giganteum HOM05D003770 ORTHO05D004424 4.7e-43 178.3 97 87.6
Pp3c21_14450 Physcomitrium patens HOM05D003770 ORTHO05D004424 1.5e-41 173.3 93 89.2
Cre12.g554800 Chlamydomonas reinhardtii HOM05D003770 ORTHO05D004424 1.8e-39 166.4 97 79.4
Pp3c19_14070 Physcomitrium patens HOM05D003770 ORTHO05D004424 4.1e-39 165.2 88 88.6
unitig_748.g8135 Utricularia gibba HOM05D003770 ORTHO05D004424 6.5e-37 157.9 79 93.7
Zm00001eb072030 Zea mays HOM05D003770 ORTHO05D004424 6.5e-37 157.9 99 76.8
MCO14G400 Micromonas commoda HOM05D003770 ORTHO05D004424 2.7e-35 152.5 95 73.7
ECA240G0263 Erigeron canadensis HOM05D003770 ORTHO05D004424 3.6e-35 152.1 79 91.1
Os04g0596900 Oryza sativa ssp. japonica HOM05D003770 ORTHO05D004424 6.1e-35 151.4 100 75.0
CDE02G2545 Ceratophyllum demersum HOM05D003770 ORTHO05D004424 5.7e-33 144.8 95 74.7
PRCOL_00002010 Prasinoderma coloniale HOM05D003770 ORTHO05D004424 1.2e-25 120.6 80 72.5
SEGI_13950 Sequoiadendron giganteum HOM05D003770 ORTHO05D004424 4.1e-23 112.1 62 85.5
BcaB03g13770 Brassica carinata HOM05D003770 ORTHO05D004424 3.4e-17 92.4 45 95.6
MD13G1246600 Malus domestica HOM05D003770 ORTHO05D004424 3.7e-16 89.0 59 72.9
MD11G1196800 Malus domestica HOM05D003770 ORTHO05D004424 2.8e-11 72.8 48 68.8
SEGI_01860 Sequoiadendron giganteum HOM05D003770 ORTHO05D004424 2.6e-09 66.2 37 78.4


User provided reference genes

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