Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 3.6e-163 578.2 286 100.0
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 1.4e-111 406.8 289 71.3
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.2e-104 382.9 281 67.6
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 3.7e-104 382.1 281 68.0
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 4.6e-102 375.2 281 65.1
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.8e-102 374.4 303 63.4
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 7.8e-102 374.4 303 63.4
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 4.3e-100 368.6 288 64.2
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 9.5e-100 367.5 286 66.1
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 4.0e-98 362.1 281 65.5
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 2.0e-97 359.8 292 62.3
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.6e-97 359.4 281 64.8
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 1.1e-95 354.0 294 61.6
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.4e-95 353.6 281 63.7
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.4e-95 353.6 288 62.2
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 2.4e-95 352.8 285 62.8
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 4.1e-95 352.1 295 63.4
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 1.2e-94 350.5 290 61.4
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 4.6e-94 348.6 282 62.8
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 1.5e-92 343.6 285 61.1
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 5.6e-92 341.7 292 60.3
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 6.2e-91 338.2 245 68.2
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.4e-90 337.0 277 62.1
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.8e-90 336.7 277 62.1
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 3.4e-89 332.4 277 61.0
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 5.8e-89 331.6 276 59.4
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 2.2e-88 329.7 288 55.9
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 1.1e-87 327.4 284 59.2
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 2.4e-87 326.2 287 56.4
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 3.2e-87 325.9 293 57.3
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 9.3e-87 324.3 276 58.7
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 7.8e-86 321.2 287 54.7
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 7.8e-86 321.2 287 54.7
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 7.8e-86 321.2 285 54.4
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 1.0e-85 320.9 289 55.4
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.7e-85 320.1 295 59.0
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.3e-85 319.7 276 60.1
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 3.0e-85 319.3 246 65.9
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 5.1e-85 318.5 276 59.8
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 8.7e-85 317.8 264 60.2
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 1.5e-84 317.0 288 55.6
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.5e-84 317.0 274 59.5
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 1.9e-84 316.6 288 53.5
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.5e-84 316.2 270 60.7
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 5.6e-84 315.1 273 60.1
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 9.6e-84 314.3 250 62.0
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.1e-83 313.2 272 59.6
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 2.1e-83 313.2 274 59.1
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 8.1e-83 311.2 270 58.1
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 5.3e-82 308.5 276 57.6
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 9.0e-82 307.8 219 65.3
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 1.2e-81 307.4 276 56.9
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 3.8e-80 302.4 274 55.1
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 3.8e-80 302.4 280 54.6
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 1.1e-79 300.8 274 55.8
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 1.9e-79 300.1 280 53.6
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 2.4e-79 299.7 293 52.9
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 2.4e-79 299.7 230 63.9
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 3.2e-79 299.3 274 56.9
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 4.2e-79 298.9 274 56.9
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 2.1e-78 296.6 291 52.2
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 2.1e-78 296.6 273 54.6
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 3.5e-78 295.8 275 53.8
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 1.3e-77 293.9 257 56.8
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.7e-77 293.5 280 53.6
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 1.7e-77 293.5 278 54.0
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 2.3e-77 293.1 281 53.0
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 1.1e-76 290.8 281 53.4
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.5e-76 290.4 306 50.7
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 2.5e-76 289.7 307 49.2
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 5.6e-76 288.5 289 50.9
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.8e-74 283.5 278 53.6
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 4.0e-74 282.3 302 49.3
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 4.0e-74 282.3 302 49.3
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 4.0e-74 282.3 372 44.1
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 5.3e-74 282.0 298 50.7
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 9.0e-74 281.2 282 52.1
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 2.6e-73 279.6 301 48.8
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 2.6e-73 279.6 301 48.8
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 3.4e-73 279.3 280 51.4
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 2.9e-72 276.2 293 50.5
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.8e-72 275.8 292 51.0
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 4.9e-72 275.4 281 50.9
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 4.9e-72 275.4 273 52.4
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 2.7e-70 269.6 225 57.3
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 4.6e-70 268.9 298 48.7
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 5.1e-69 265.4 261 52.9
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 8.7e-69 264.6 290 51.4
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 1.3e-67 260.8 220 56.8
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 5.3e-66 255.4 303 47.2
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 6.9e-66 255.0 188 67.0
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 1.2e-65 254.2 195 65.1
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.5e-65 253.8 244 53.3
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 3.4e-65 252.7 282 50.4
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 3.4e-65 252.7 224 57.1
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 1.9e-63 246.9 275 48.7
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 3.2e-63 246.1 265 47.5
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 4.2e-63 245.7 180 67.2
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 6.0e-62 241.9 193 63.2
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 7.9e-62 241.5 313 43.1
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.8e-61 240.4 219 55.3
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 2.3e-61 240.0 283 48.4
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 8.7e-61 238.0 182 64.8
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.9e-60 236.9 289 46.4
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 2.5e-60 236.5 390 37.7
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 8.2e-59 231.5 233 49.8
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 2.4e-58 229.9 274 46.0
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.4e-55 220.7 293 44.4
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 2.7e-54 216.5 277 44.8
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 6.1e-54 215.3 293 44.4
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 9.7e-52 208.0 174 59.8
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 3.8e-48 196.1 172 56.4
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 5.0e-48 195.7 232 43.1
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 3.2e-47 193.0 179 53.6
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 6.5e-40 168.7 178 47.8
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.1e-39 167.9 177 46.3
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 7.7e-33 145.2 148 52.0
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 2.9e-32 143.3 82 74.4
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 9.4e-31 138.3 186 39.8
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 1.3e-24 117.9 239 32.6
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.4e-18 97.8 121 41.3
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 1.4e-18 97.8 152 44.7
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 2.4e-18 97.1 106 50.0
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 1.3e-16 91.3 234 30.8
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 3.6e-14 83.2 170 31.8
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.0e-13 81.6 109 34.9
SMO169G0249 Selaginella moellendorffii HOM05D005964 ORTHO05D007242 1.0e-13 81.6 200 29.5
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 9.8e-12 75.1 44 75.0
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 4.9e-11 72.8 40 72.5
Ciclev10003484m.g Citrus clementina HOM05D005964 ORTHO05D007242 2.0e-09 67.4 72 58.3
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 3.5e-09 66.6 50 54.0


User provided reference genes

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