Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1356 Acer truncatum HOM05D000336 ORTHO05D000593 1.7e-85 319.3 166 100.0
Sed0024361 Sechium edule HOM05D000336 ORTHO05D000593 4.5e-17 92.0 101 51.5
TWI59G0378 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 1.3e-16 90.5 103 49.5
TWI14G0475 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 8.5e-16 87.8 104 51.0
ClCG10G009770 Citrullus lanatus HOM05D000336 ORTHO05D000593 1.1e-15 87.4 102 48.0
MELO3C018043.2 Cucumis melo HOM05D000336 ORTHO05D000593 4.2e-15 85.5 102 49.0
CsaV3_4G014650 Cucumis sativus L. HOM05D000336 ORTHO05D000593 5.5e-15 85.1 102 47.1
Ciclev10028177m.g Citrus clementina HOM05D000336 ORTHO05D000593 1.6e-14 83.6 104 48.1
Lalb_Chr16g0383081 Lupinus albus HOM05D000336 ORTHO05D000593 2.7e-14 82.8 109 45.9
Lj4g0007650 Lotus japonicus HOM05D000336 ORTHO05D000593 1.8e-13 80.1 83 50.6
CANSAT54G0865 Cannabis sativa HOM05D000336 ORTHO05D000593 3.0e-13 79.3 105 50.5
Lj6g0016097 Lotus japonicus HOM05D000336 ORTHO05D000593 3.9e-13 79.0 118 43.2
Phvul.006G199400 Phaseolus vulgaris HOM05D000336 ORTHO05D000593 1.1e-12 77.4 100 46.0
VMungo0540G1758 Vigna mungo HOM05D000336 ORTHO05D000593 1.5e-12 77.0 102 46.1
Lalb_Chr18g0060291 Lupinus albus HOM05D000336 ORTHO05D000593 2.0e-12 76.6 110 45.5
Phvul.006G199500 Phaseolus vulgaris HOM05D000336 ORTHO05D000593 2.0e-12 76.6 103 45.6
TWI23G0192 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 2.5e-12 76.3 104 46.2
Cpa.g.c39174 Carica papaya HOM05D000336 ORTHO05D000593 3.3e-12 75.9 108 44.4
Manes.10G093200 Manihot esculenta HOM05D000336 ORTHO05D000593 7.4e-12 74.7 112 44.6
GSVIVG01038522001 Vitis vinifera HOM05D000336 ORTHO05D000593 7.4e-12 74.7 87 49.4
Duzib132G0652 Durio zibethinus HOM05D000336 ORTHO05D000593 9.7e-12 74.3 113 44.2
Glyma.13G254500 Glycine max HOM05D000336 ORTHO05D000593 9.7e-12 74.3 102 45.1
MD10G1057000 Malus domestica HOM05D000336 ORTHO05D000593 1.3e-11 73.9 117 45.3
arahy.Tifrunner.gnm1.ann1.F46B23 Arachis hypogaea HOM05D000336 ORTHO05D000593 1.7e-11 73.6 107 43.9
MD05G1049900 Malus domestica HOM05D000336 ORTHO05D000593 1.7e-11 73.6 117 45.3
Potri.009G080000 Populus trichocarpa HOM05D000336 ORTHO05D000593 1.7e-11 73.6 108 41.7
arahy.Tifrunner.gnm1.ann1.JI061M Arachis hypogaea HOM05D000336 ORTHO05D000593 4.8e-11 72.0 107 43.0
Thecc.02G124900 Theobroma cacao HOM05D000336 ORTHO05D000593 4.8e-11 72.0 115 47.0
Sabra09G0062000 Salix brachista HOM05D000336 ORTHO05D000593 6.3e-11 71.6 106 42.5
Duzib052G0642 Durio zibethinus HOM05D000336 ORTHO05D000593 8.2e-11 71.2 81 50.6
Manes.10G094333 Manihot esculenta HOM05D000336 ORTHO05D000593 8.2e-11 71.2 112 42.9
Glyma.15G060200 Glycine max HOM05D000336 ORTHO05D000593 1.1e-10 70.9 53 58.5
Prupe.8G075200 Prunus persica HOM05D000336 ORTHO05D000593 1.4e-10 70.5 81 53.1
arahy.Tifrunner.gnm1.ann1.GEB016 Arachis hypogaea HOM05D000336 ORTHO05D000593 1.8e-10 70.1 107 42.1
arahy.Tifrunner.gnm1.ann1.303TEV Arachis hypogaea HOM05D000336 ORTHO05D000593 2.4e-10 69.7 107 42.1
Gohir.A01G010100 Gossypium hirsutum HOM05D000336 ORTHO05D000593 3.1e-10 69.3 55 58.2
Gorai.013G053500 Gossypium raimondii HOM05D000336 ORTHO05D000593 5.3e-10 68.6 119 41.2
TAR381G1197 Trochodendron aralioides HOM05D000336 ORTHO05D000593 5.3e-10 68.6 101 38.6
Gohir.D13G047900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.1e-10 67.8 119 39.5
Dinv08966 Davidia involucrata HOM05D000336 ORTHO05D000593 1.2e-09 67.4 100 46.0
Duzib248G0904 Durio zibethinus HOM05D000336 ORTHO05D000593 1.2e-09 67.4 122 45.1
Gohir.A13G049400 Gossypium hirsutum HOM05D000336 ORTHO05D000593 1.2e-09 67.4 119 41.2
Sed0007557 Sechium edule HOM05D000336 ORTHO05D000593 1.5e-09 67.0 99 39.4
Lalb_Chr15g0090261 Lupinus albus HOM05D000336 ORTHO05D000593 2.0e-09 66.6 105 41.0
Potri.001G285700 Populus trichocarpa HOM05D000336 ORTHO05D000593 2.6e-09 66.2 109 41.3
CsaV3_7G007420 Cucumis sativus L. HOM05D000336 ORTHO05D000593 4.5e-09 65.5 56 53.6
TAR381G0068 Trochodendron aralioides HOM05D000336 ORTHO05D000593 7.7e-09 64.7 101 40.6
MELO3C018560.2 Cucumis melo HOM05D000336 ORTHO05D000593 1.0e-08 64.3 56 55.4
Sabra16G0178100 Salix brachista HOM05D000336 ORTHO05D000593 1.3e-08 63.9 106 38.7
Ca_18413_v3 Cicer arietinum L. HOM05D000336 ORTHO05D000593 2.2e-08 63.2 93 43.0
ClCG09G016470 Citrullus lanatus HOM05D000336 ORTHO05D000593 2.2e-08 63.2 83 47.0
Gohir.D01G009700 Gossypium hirsutum HOM05D000336 ORTHO05D000593 2.2e-08 63.2 116 42.2
Gorai.002G011800 Gossypium raimondii HOM05D000336 ORTHO05D000593 2.2e-08 63.2 116 42.2
Psat7g102800 Pisum sativum HOM05D000336 ORTHO05D000593 2.9e-08 62.8 60 50.0
Medtr4g092900 Medicago truncatula HOM05D000336 ORTHO05D000593 3.8e-08 62.4 110 38.2
CSS0038549 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 5.0e-08 62.0 58 48.3
Glyma.15G060300 Glycine max HOM05D000336 ORTHO05D000593 5.0e-08 62.0 102 42.2
FAN27G1881 Fragaria x ananassa HOM05D000336 ORTHO05D000593 1.4e-07 60.5 112 46.4
TAR625G1523 Trochodendron aralioides HOM05D000336 ORTHO05D000593 1.9e-07 60.1 77 40.3
FAN20G1434 Fragaria x ananassa HOM05D000336 ORTHO05D000593 2.5e-07 59.7 118 44.1
TPR.G16886 Trifolium pratense HOM05D000336 ORTHO05D000593 3.2e-07 59.3 105 40.0
TAR376G0749 Trochodendron aralioides HOM05D000336 ORTHO05D000593 3.2e-07 59.3 97 39.2
FAN15G1559 Fragaria x ananassa HOM05D000336 ORTHO05D000593 4.2e-07 58.9 117 43.6
Cfa004802 Carpinus fangiana HOM05D000336 ORTHO05D000593 5.5e-07 58.5 68 50.0
Actinidia02412 Actinidia chinensis HOM05D000336 ORTHO05D000593 7.2e-07 58.2 114 36.0
Hund06480 Selenicereus undatus HOM05D000336 ORTHO05D000593 7.2e-07 58.2 109 34.9
FvH4_2g11150 Fragaria vesca HOM05D000336 ORTHO05D000593 9.4e-07 57.8 79 46.8
Medtr4g092880 Medicago truncatula HOM05D000336 ORTHO05D000593 9.4e-07 57.8 95 43.2
QL11p026618 Quercus lobata HOM05D000336 ORTHO05D000593 9.4e-07 57.8 40 65.0
RcHm_v2.0_Chr6g0269471 Rosa chinensis HOM05D000336 ORTHO05D000593 9.4e-07 57.8 105 44.8
Psat1g212800 Pisum sativum HOM05D000336 ORTHO05D000593 1.6e-06 57.0 114 37.7
vmacro23359 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 1.6e-06 57.0 57 50.9
Actinidia00324 Actinidia chinensis HOM05D000336 ORTHO05D000593 3.6e-06 55.8 99 37.4
Haze_10394 Corylus avellana HOM05D000336 ORTHO05D000593 3.6e-06 55.8 110 39.1
CiPaw.05G026900 Carya illinoinensis HOM05D000336 ORTHO05D000593 6.1e-06 55.1 105 38.1
TPR.G16870 Trifolium pratense HOM05D000336 ORTHO05D000593 6.1e-06 55.1 52 50.0
Ca_00182_v3 Cicer arietinum L. HOM05D000336 ORTHO05D000593 7.9e-06 54.7 106 36.8


User provided reference genes

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