Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1343 Acer truncatum HOM05D000017 ORTHO05D000013 4.0e-47 191.0 93 100.0
Atru.chr3.1166 Acer truncatum HOM05D000017 ORTHO05D000013 9.9e-22 106.7 56 98.2
Atru.chr7.748 Acer truncatum HOM05D000017 ORTHO05D000013 3.0e-18 95.1 84 47.6
Atru.chr10.1873 Acer truncatum HOM05D000017 ORTHO05D000013 6.8e-15 84.0 85 47.1
Atru.chr3.2457 Acer truncatum HOM05D000017 ORTHO05D000013 1.7e-13 79.3 85 44.7
Atru.chr10.215 Acer truncatum HOM05D000017 ORTHO05D000013 4.9e-13 77.8 85 42.4
Atru.chr6.454 Acer truncatum HOM05D000017 ORTHO05D000013 6.4e-13 77.4 85 42.4
Atru.chr8.1311 Acer truncatum HOM05D000017 ORTHO05D000013 8.4e-13 77.0 76 44.7
Atru.chr10.566 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-12 76.3 85 40.0
Atru.chr3.730 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-12 75.9 85 38.8
Atru.chr1.2885 Acer truncatum HOM05D000017 ORTHO05D000013 4.2e-12 74.7 81 40.7
Atru.chr12.1107 Acer truncatum HOM05D000017 ORTHO05D000013 5.4e-12 74.3 64 43.8
Atru.chr11.1920 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-12 73.9 85 42.4
Atru.chr1.2149 Acer truncatum HOM05D000017 ORTHO05D000013 3.5e-11 71.6 85 37.6
Atru.chr11.936 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-11 71.2 85 42.4
Atru.chr2.1485 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-11 71.2 85 41.2
Atru.chr8.42 Acer truncatum HOM05D000017 ORTHO05D000013 7.8e-11 70.5 76 40.8
THA.LOC104817595 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.3e-10 69.7 85 40.0
THA.LOC104810169 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 6.6e-10 67.4 85 38.8
Cc06_g15030 Coffea canephora HOM05D000017 ORTHO05D000013 8.7e-10 67.0 91 36.3
THA.LOC104803431 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-09 66.6 85 41.2
THA.LOC104806000 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-09 66.6 85 41.2
THA.LOC104824602 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.1e-09 66.6 85 41.2
THA.LOC104806013 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.5e-09 65.5 85 38.8
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-09 65.1 86 38.4
Ciclev10028630m.g Citrus clementina HOM05D000017 ORTHO05D000013 4.3e-09 64.7 87 40.2
TWI23G0845 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.3e-09 64.7 86 40.7
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.6e-09 64.3 86 38.4
Atru.chr4.646 Acer truncatum HOM05D000017 ORTHO05D000013 7.3e-09 63.9 84 36.9
CSS0018151 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 7.3e-09 63.9 89 37.1
Atru.chr6.1096 Acer truncatum HOM05D000017 ORTHO05D000013 9.6e-09 63.5 85 37.6
COL.COLO4_10434 Corchorus olitorius HOM05D000017 ORTHO05D000013 9.6e-09 63.5 85 34.1
TWI59G1465 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-09 63.5 86 39.5
TWI79G1677 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.6e-09 63.5 86 39.5
CSS0005205 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.3e-08 63.2 89 36.0
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-08 62.8 89 37.1
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.6e-08 62.8 85 32.9
Atru.chr7.860 Acer truncatum HOM05D000017 ORTHO05D000013 3.6e-08 61.6 82 37.8
TWI09G0785 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.6e-08 61.6 85 35.3
Atru.chr1.3260 Acer truncatum HOM05D000017 ORTHO05D000013 4.8e-08 61.2 81 33.3
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 4.8e-08 61.2 85 37.6
Nitab4.5_0000419g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000013 4.8e-08 61.2 91 31.9
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.8e-08 61.2 85 31.8
ECA248G0264 Erigeron canadensis HOM05D000017 ORTHO05D000013 6.2e-08 60.8 85 32.9
Gorai.002G000800 Gossypium raimondii HOM05D000017 ORTHO05D000013 6.2e-08 60.8 85 32.9
ECA232G2152 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.1e-08 60.5 86 36.0
Ciclev10023995m.g Citrus clementina HOM05D000017 ORTHO05D000013 1.4e-07 59.7 86 36.0
TWI75G0721 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.4e-07 59.7 85 35.3
Atru.chr3.3587 Acer truncatum HOM05D001475 ORTHO05D001525 1.8e-07 59.3 71 40.8
TWI59G0444 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.8e-07 59.3 87 41.4
TWI63G0149 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.8e-07 59.3 86 34.9
TWI79G0048 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.8e-07 59.3 86 37.2
ECA238G3593 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.4e-07 58.9 86 33.7
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.4e-07 58.9 85 34.1
Hund14945 Selenicereus undatus HOM05D000017 ORTHO05D000013 2.4e-07 58.9 85 37.6
Gorai.011G000500 Gossypium raimondii HOM05D000017 ORTHO05D000013 3.1e-07 58.5 85 31.8
Actinidia00337 Actinidia chinensis HOM05D000017 ORTHO05D000013 4.0e-07 58.2 85 32.9
Hma1.2p1_0257F.1_g103550 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.3e-07 57.8 85 35.3
ECA236G3721 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.0e-07 57.0 86 34.9
THA.LOC104815408 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.0e-07 57.0 85 36.5
ECA238G0171 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.2e-06 56.6 85 31.8
TWI59G0994 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 56.6 86 37.2
CSS0010669 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.5e-06 56.2 85 32.9
Dinv16052 Davidia involucrata HOM05D000017 ORTHO05D000013 1.5e-06 56.2 85 31.8
ECA233G5000 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.5e-06 56.2 85 31.8
COL.COLO4_26563 Corchorus olitorius HOM05D000017 ORTHO05D000013 2.0e-06 55.8 81 33.3
Thhalv10006911m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.0e-06 55.8 85 34.1
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 55.8 85 35.3
Atru.chr1.1848 Acer truncatum HOM05D000017 ORTHO05D000013 2.6e-06 55.5 76 39.5
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 55.5 82 36.6
CANSAT25G3737 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-06 55.5 85 30.6
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-06 55.5 86 34.9
Os10g0104700 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 2.6e-06 55.5 86 33.7
PGR004G0303 Punica granatum HOM05D000017 ORTHO05D000013 2.6e-06 55.5 85 31.8
PGR044G1328 Punica granatum HOM05D000017 ORTHO05D000013 2.6e-06 55.5 85 31.8
TWI81G0891 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-06 55.5 86 31.4
ECA247G3710 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.4e-06 55.1 86 36.0
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 55.1 85 34.1
Hma1.2p1_0621F.1_g190790 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 55.1 85 31.8
Os06g0704400 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 3.4e-06 55.1 85 35.3
COL.COLO4_17826 Corchorus olitorius HOM05D000017 ORTHO05D000013 4.4e-06 54.7 85 31.8
Dinv06075 Davidia involucrata HOM05D000017 ORTHO05D000013 4.4e-06 54.7 85 27.1
THA.LOC104808850 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.4e-06 54.7 85 36.5
Ciclev10023619m.g Citrus clementina HOM05D000017 ORTHO05D000013 7.6e-06 53.9 85 35.3
COL.COLO4_05488 Corchorus olitorius HOM05D000017 ORTHO05D000013 7.6e-06 53.9 97 32.0
Gorai.007G309200 Gossypium raimondii HOM05D000017 ORTHO05D000013 7.6e-06 53.9 96 29.2
Solyc08g081505.1 Solanum lycopersicum HOM05D000017 ORTHO05D000013 7.6e-06 53.9 86 31.4
Sopen08g029830 Solanum pennellii HOM05D000017 ORTHO05D000013 7.6e-06 53.9 86 31.4
THA.LOC104820572 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 7.6e-06 53.9 85 34.1
Atru.chr13.2307 Acer truncatum HOM05D000017 ORTHO05D000013 9.9e-06 53.5 85 31.8
Ca_18426_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 9.9e-06 53.5 85 31.8
Ciclev10006748m.g Citrus clementina HOM05D000017 ORTHO05D000013 9.9e-06 53.5 88 35.2
ECA246G2359 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.9e-06 53.5 86 31.4
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.9e-06 53.5 85 34.1
RcHm_v2.0_Chr4g0427621 Rosa chinensis HOM05D000017 ORTHO05D000013 9.9e-06 53.5 85 30.6
THA.LOC104826793 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.9e-06 53.5 85 32.9
THA.LOC109116229 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.9e-06 53.5 85 36.5


User provided reference genes

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