Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.125 Acer truncatum HOM05D002599 ORTHO05D001895 5.8e-55 217.2 104 100.0
Atru.chr13.1025 Acer truncatum HOM05D008353 ORTHO05D001895 7.1e-45 183.7 103 87.4
Atru.chr13.1023 Acer truncatum HOM05D008353 ORTHO05D001895 7.9e-44 180.3 103 85.4
Atru.chr8.2426 Acer truncatum HOM05D008353 ORTHO05D001895 1.9e-29 132.5 87 70.1
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 1.9e-21 105.9 88 52.3
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.9e-21 105.9 88 54.5
Manes.07G022000 Manihot esculenta HOM05D008353 ORTHO05D001895 2.7e-20 102.1 102 51.0
Manes.07G021800 Manihot esculenta HOM05D008353 ORTHO05D001895 1.9e-18 95.9 102 46.1
Potri.003G011200 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.3e-17 93.2 105 46.7
Potri.004G220550 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.2e-17 92.4 83 51.8
Potri.004G220700 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.2e-17 92.4 83 51.8
Potri.004G220400 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.8e-17 92.0 83 51.8
Manes.10G124100 Manihot esculenta HOM05D008353 ORTHO05D001895 1.4e-16 89.7 102 44.1
Manes.10G123900 Manihot esculenta HOM05D008353 ORTHO05D001895 6.9e-16 87.4 102 42.2
Sabra01G0167300 Salix brachista HOM05D008353 ORTHO05D001895 1.5e-15 86.3 83 49.4
Sabra01G0166900 Salix brachista HOM05D008353 ORTHO05D001895 3.4e-15 85.1 83 50.6
Manes.07G021400 Manihot esculenta HOM05D008353 ORTHO05D001895 1.0e-14 83.6 81 48.1
Thecc.02G092000 Theobroma cacao HOM05D008353 ORTHO05D001895 1.0e-14 83.6 81 46.9
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-14 82.8 85 43.5
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.0e-14 81.3 86 45.3
Thecc.02G091800 Theobroma cacao HOM05D008353 ORTHO05D001895 1.9e-13 79.3 84 46.4
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-13 79.0 86 43.0
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 5.5e-13 77.8 87 40.2
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 7.2e-13 77.4 80 47.5
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.4e-13 77.0 86 43.0
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-12 75.9 86 41.9
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-12 75.9 84 44.0
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-12 75.9 86 41.9
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 6.1e-12 74.3 89 40.4
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-11 73.6 86 39.5
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-11 73.2 84 38.1
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-11 73.2 99 34.3
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-11 72.8 105 36.2
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.3e-11 72.4 87 41.4
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 3.0e-11 72.0 97 39.2
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-11 72.0 84 41.7
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-11 72.0 86 45.3
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 3.9e-11 71.6 86 37.2
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-11 71.6 90 40.0
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.1e-11 71.2 84 38.1
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 6.7e-11 70.9 105 35.2
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 1.1e-10 70.1 86 43.0
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-10 69.7 84 36.9
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-10 69.7 87 36.8
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-10 68.6 81 40.7
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 4.3e-10 68.2 84 39.3
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-10 68.2 81 39.5
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 5.7e-10 67.8 81 40.7
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 7.4e-10 67.4 86 36.0
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 9.7e-10 67.0 88 39.8
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-09 66.6 84 38.1
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-09 66.6 86 39.5
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-09 65.9 89 38.2
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-09 65.9 86 39.5
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 2.2e-09 65.9 83 38.6
COL.COLO4_11746 Corchorus olitorius HOM05D008353 ORTHO05D001895 2.8e-09 65.5 91 40.7
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-09 65.5 85 36.5
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-09 65.5 93 34.4
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.7e-09 65.1 91 35.2
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 3.7e-09 65.1 87 37.9
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.8e-09 64.7 89 37.1
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.8e-09 64.7 89 38.2
Gohir.A12G027266 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.8e-09 64.7 87 39.1
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.8e-09 64.7 89 38.2
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.8e-09 64.7 84 40.5
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 4.8e-09 64.7 83 38.6
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 6.3e-09 64.3 93 36.6
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-09 63.9 85 40.0
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.1e-08 63.5 81 42.0
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-08 63.5 86 36.0
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-08 63.5 85 35.3
Gohir.A03G192300 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.4e-08 63.2 88 36.4
Gohir.D02G213100 Gossypium hirsutum HOM05D008353 ORTHO05D001895 1.8e-08 62.8 89 37.1
Gorai.005G241000 Gossypium raimondii HOM05D008353 ORTHO05D001895 1.8e-08 62.8 89 37.1
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-08 62.8 80 38.8
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-08 62.8 85 35.3
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 3.1e-08 62.0 87 34.5
Gohir.A04G133075 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-08 62.0 85 35.3
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-08 62.0 85 35.3
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-08 62.0 85 35.3
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 4.1e-08 61.6 83 36.1
Gohir.D02G213200 Gossypium hirsutum HOM05D008353 ORTHO05D001895 5.3e-08 61.2 103 33.0
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.3e-08 61.2 89 37.1
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.3e-08 61.2 84 36.9
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 5.3e-08 61.2 94 31.9
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.9e-08 60.8 86 37.2
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.9e-08 60.8 86 37.2
Atru.chr6.704 Acer truncatum HOM05D002599 ORTHO05D001895 9.1e-08 60.5 98 31.6
Duzib052G1144 Durio zibethinus HOM05D002599 ORTHO05D001895 9.1e-08 60.5 97 37.1
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.1e-08 60.5 86 39.5
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 9.1e-08 60.5 85 41.2
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-07 59.7 86 34.9
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-07 59.7 90 33.3
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-07 59.3 86 37.2
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-07 58.9 86 37.2
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.5e-07 58.2 89 33.7
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.5e-07 58.2 89 33.7
Gorai.012G151200 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.5e-07 58.2 102 31.4
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.5e-07 58.2 89 33.7
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-07 58.2 91 36.3
Duzib052G0486 Durio zibethinus HOM05D002599 ORTHO05D001895 5.9e-07 57.8 98 34.7
Gohir.A04G121884 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.7e-07 57.4 102 29.4
COL.COLO4_11748 Corchorus olitorius HOM05D008353 ORTHO05D001895 1.0e-06 57.0 79 35.4
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-06 57.0 91 36.3
Gohir.A12G027233 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-06 57.0 87 35.6
Gohir.D04G176066 Gossypium hirsutum HOM05D002599 ORTHO05D047328 1.0e-06 57.0 87 39.1
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-06 57.0 89 34.8
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-06 57.0 89 34.8
Gorai.012G167600 Gossypium raimondii HOM05D002599 ORTHO05D047328 1.0e-06 57.0 87 39.1
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 1.0e-06 57.0 100 35.0
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-06 57.0 87 39.1
Gohir.D04G163166 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-06 56.6 102 31.4
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 1.3e-06 56.6 83 34.9
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-06 56.2 89 34.8
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.7e-06 56.2 84 35.7
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.2e-06 55.8 89 33.7
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-06 55.8 90 36.7
COL.COLO4_17742 Corchorus olitorius HOM05D002599 ORTHO05D012670 5.0e-06 54.7 81 35.8
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.0e-06 54.7 86 32.6
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.0e-06 54.7 90 35.6
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.0e-06 54.7 86 32.6
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.5e-06 54.3 85 31.8


User provided reference genes

Program Settings