Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 6.1e-102 374.4 222 100.0
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 1.9e-15 87.0 93 62.4
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 1.9e-15 87.0 87 62.1
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 3.3e-15 86.3 70 58.6
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 1.3e-14 84.3 93 59.1
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.8e-14 83.2 93 58.1
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.4e-13 80.1 68 58.8
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 4.0e-13 79.3 70 55.7
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 5.3e-13 79.0 93 53.8
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 9.0e-13 78.2 65 60.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 2.6e-12 76.6 90 55.6
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 5.8e-12 75.5 87 52.9
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 5.8e-12 75.5 88 55.7
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 7.6e-12 75.1 76 55.3
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 7.6e-12 75.1 93 46.2
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 1.3e-11 74.3 93 46.2
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 1.3e-11 74.3 91 45.1
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 2.9e-11 73.2 65 60.0
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 8.4e-11 71.6 92 47.8
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 1.1e-10 71.2 93 47.3
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.4e-10 70.9 91 52.7
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 1.9e-10 70.5 82 59.8
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 1.9e-10 70.5 87 57.5
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 4.2e-10 69.3 92 56.5
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 4.2e-10 69.3 87 57.5
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 4.2e-10 69.3 65 55.4
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 5.4e-10 68.9 93 59.1
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 5.4e-10 68.9 90 44.4
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 9.3e-10 68.2 100 52.0
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 9.3e-10 68.2 90 43.3
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.2e-09 67.8 70 55.7
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.2e-09 67.8 91 51.6
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.6e-09 67.4 90 42.2
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 2.1e-09 67.0 90 51.1
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 2.7e-09 66.6 70 47.1
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 2.7e-09 66.6 70 47.1
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 3.5e-09 66.2 90 42.2
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 4.6e-09 65.9 91 52.7
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 7.9e-09 65.1 65 50.8
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.0e-08 64.7 64 56.2
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.0e-08 64.7 87 57.5
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.3e-08 64.3 87 44.8
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 2.3e-08 63.5 92 55.4
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 2.3e-08 63.5 88 51.1
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 2.3e-08 63.5 93 51.6
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.3e-08 63.5 86 41.9
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 3.0e-08 63.2 88 37.5
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 3.0e-08 63.2 92 50.0
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 3.0e-08 63.2 70 50.0
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 3.0e-08 63.2 90 50.0
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 3.0e-08 63.2 91 52.7
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 8.7e-08 61.6 92 47.8
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 8.7e-08 61.6 86 41.9
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 1.1e-07 61.2 88 52.3
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.1e-07 61.2 98 37.8
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 1.1e-07 61.2 63 50.8
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 1.5e-07 60.8 65 46.2
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.5e-07 60.8 69 44.9
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 1.9e-07 60.5 67 47.8
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 2.5e-07 60.1 89 52.8
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 2.5e-07 60.1 66 47.0
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 2.5e-07 60.1 62 48.4
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 3.3e-07 59.7 68 47.1
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 7.4e-07 58.5 88 34.1
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 7.4e-07 58.5 65 47.7
Lsat_1_v5_gn_5_108861 Lactuca sativa HOM05D007310 ORTHO05D002375 7.4e-07 58.5 68 47.1
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 7.4e-07 58.5 63 50.8
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 9.6e-07 58.2 70 40.0
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 2.1e-06 57.0 86 45.3
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.1e-06 57.0 68 52.9
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 4.8e-06 55.8 68 48.5
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 6.2e-06 55.5 59 49.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 8.1e-06 55.1 66 42.4


User provided reference genes

Program Settings