Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1019 Acer truncatum HOM05D022648 ORTHO05D023191 1.5e-71 272.7 138 100.0
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 4.6e-23 111.7 141 44.0
Atru.chr9.1723 Acer truncatum HOM05D022648 ORTHO05D023191 2.3e-22 109.4 99 56.6
Ciclev10003509m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.0e-14 82.4 116 37.1
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 9.5e-13 77.4 138 34.8
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 1.6e-12 76.6 111 38.7
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-12 75.9 130 32.3
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.3e-11 72.8 141 31.9
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.0e-11 72.0 138 33.3
CANSAT01G0991 Cannabis sativa HOM05D000002 ORTHO05D000001 5.2e-11 71.6 129 30.2
CANSAT78G1493 Cannabis sativa HOM05D000002 ORTHO05D000001 5.2e-11 71.6 98 36.7
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 6.8e-11 71.2 120 29.2
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 8.9e-11 70.9 141 30.5
Atru.chr3.1163 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-10 70.1 132 28.0
Atru.chr5.2499 Acer truncatum HOM05D019558 ORTHO05D000001 1.5e-10 70.1 140 30.7
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 1.5e-10 70.1 137 29.9
Atru.chr10.264 Acer truncatum HOM05D000002 ORTHO05D000001 3.4e-10 68.9 139 30.9
CANSAT25G2785 Cannabis sativa HOM05D000002 ORTHO05D000001 3.4e-10 68.9 112 35.7
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 4.4e-10 68.6 135 28.9
Dinv13259 Davidia involucrata HOM05D000097 ORTHO05D000041 5.8e-10 68.2 110 34.5
SGA_v2.0_scaffold88G27191 Striga asiatica HOM05D001613 ORTHO05D001556 9.8e-10 67.4 145 32.4
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 9.8e-10 67.4 111 28.8
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-09 67.0 135 28.9
Dinv13278 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-09 66.6 108 34.3
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-09 66.6 131 27.5
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 1.7e-09 66.6 122 32.0
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 2.2e-09 66.2 136 30.1
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 2.2e-09 66.2 139 25.9
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 2.2e-09 66.2 122 31.1
CANSAT01G1314 Cannabis sativa HOM05D000002 ORTHO05D000001 3.7e-09 65.5 113 31.9
Dinv13260 Davidia involucrata HOM05D000097 ORTHO05D000041 3.7e-09 65.5 110 31.8
Dinv13270 Davidia involucrata HOM05D002148 ORTHO05D013593 3.7e-09 65.5 125 33.6
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-09 65.5 110 30.9
Cpa.g.sc47.46 Carica papaya HOM05D012279 ORTHO05D000001 4.9e-09 65.1 126 28.6
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 4.9e-09 65.1 140 27.1
CANSAT56G4524 Cannabis sativa HOM05D007933 ORTHO05D000001 6.4e-09 64.7 118 29.7
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.3e-09 64.3 135 29.6
PSO423G0122 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-08 63.9 104 33.7
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-08 63.9 139 30.2
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 2.4e-08 62.8 136 26.5
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-08 62.8 139 29.5
Ah.11g039570 Amaranthus hybridus HOM05D000002 ORTHO05D000001 3.2e-08 62.4 110 27.3
arahy.Tifrunner.gnm1.ann1.8J635S Arachis hypogaea HOM05D000002 ORTHO05D000001 4.1e-08 62.0 109 28.4
Hma1.2p1_1761F.1_g301270 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.1e-08 62.0 129 31.0
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 4.1e-08 62.0 133 32.3
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 4.1e-08 62.0 134 26.9
CANSAT25G1167 Cannabis sativa HOM05D000002 ORTHO05D000001 5.4e-08 61.6 111 32.4
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.4e-08 61.6 104 30.8
Dinv02040 Davidia involucrata HOM05D000097 ORTHO05D000041 5.4e-08 61.6 125 28.8
TPR.G833 Trifolium pratense HOM05D000002 ORTHO05D000001 5.4e-08 61.6 109 25.7
Dinv09586 Davidia involucrata HOM05D000097 ORTHO05D013593 7.1e-08 61.2 130 33.1
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 9.2e-08 60.8 140 27.1
MD02G1303700 Malus domestica HOM05D000002 ORTHO05D000001 9.2e-08 60.8 145 29.0
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 9.2e-08 60.8 128 33.6
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 9.2e-08 60.8 104 27.9
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 1.2e-07 60.5 141 31.9
Sabra05G0021700 Salix brachista HOM05D000002 ORTHO05D000001 1.2e-07 60.5 93 32.3
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.2e-07 60.5 96 27.1
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-07 60.1 144 31.9
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-07 60.1 116 31.0
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-07 60.1 138 29.0
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 2.1e-07 59.7 134 31.3
FvH4_4g05872 Fragaria vesca HOM05D000002 ORTHO05D000001 2.1e-07 59.7 111 27.0
Prupe.7G008100 Prunus persica HOM05D000007 ORTHO05D000017 2.1e-07 59.7 135 29.6
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-07 59.7 111 28.8
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.7e-07 59.3 134 27.6
Dinv03804 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-07 59.3 141 29.1
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 2.7e-07 59.3 101 29.7
MD11G1197500 Malus domestica HOM05D000002 ORTHO05D000001 2.7e-07 59.3 110 32.7
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.7e-07 59.3 141 30.5
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 2.7e-07 59.3 150 27.3
Solyc06g082797.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.7e-07 59.3 138 29.7
Atru.chr5.2493 Acer truncatum HOM05D022648 ORTHO05D023191 3.5e-07 58.9 69 40.6
CANSAT21G0774 Cannabis sativa HOM05D007933 ORTHO05D000001 3.5e-07 58.9 97 33.0
Ciclev10024253m.g Citrus clementina HOM05D000002 ORTHO05D000001 3.5e-07 58.9 94 30.9
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-07 58.9 119 26.9
Nn2g15978 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.5e-07 58.9 109 25.7
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 58.9 138 30.4
FvH4_4g05782 Fragaria vesca HOM05D000002 ORTHO05D000001 4.6e-07 58.5 140 27.9
Oeu059914.1 Olea europaea HOM05D000002 ORTHO05D000001 4.6e-07 58.5 119 32.8
Psat4g210200 Pisum sativum HOM05D018610 ORTHO05D000001 4.6e-07 58.5 122 31.1
CANSAT54G0642 Cannabis sativa HOM05D000002 ORTHO05D000001 6.0e-07 58.2 118 32.2
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.0e-07 58.2 104 30.8
Dinv13272 Davidia involucrata HOM05D000097 ORTHO05D000041 6.0e-07 58.2 108 33.3
Atru.chr2.2558 Acer truncatum HOM05D019558 ORTHO05D000001 7.8e-07 57.8 109 33.9
Dinv07199 Davidia involucrata HOM05D000097 ORTHO05D000041 7.8e-07 57.8 112 26.8
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 7.8e-07 57.8 116 34.5
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 7.8e-07 57.8 111 36.0
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 7.8e-07 57.8 140 30.0
Prupe.6G214700 Prunus persica HOM05D000007 ORTHO05D000017 1.0e-06 57.4 110 30.0
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.0e-06 57.4 131 30.5
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 142 29.6
Sabra14G0114400 Salix brachista HOM05D000002 ORTHO05D000001 1.0e-06 57.4 110 28.2
Sed0018564 Sechium edule HOM05D007933 ORTHO05D000001 1.0e-06 57.4 132 27.3
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 1.0e-06 57.4 116 26.7
Dinv00709 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-06 57.0 115 27.8
PSO421G0367 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-06 57.0 147 28.6
Nn2g15971 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-06 56.6 110 24.5
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 1.7e-06 56.6 110 35.5
Oeu021500.1 Olea europaea HOM05D000002 ORTHO05D000001 1.7e-06 56.6 104 33.7
Psat7g120640 Pisum sativum HOM05D018610 ORTHO05D000001 1.7e-06 56.6 125 31.2
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 1.7e-06 56.6 118 28.8
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 2.3e-06 56.2 134 26.9
Hma1.2p1_2656F.1_g326290 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.3e-06 56.2 126 27.8
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-06 56.2 122 28.7
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 2.3e-06 56.2 111 34.2
Sabra05G0005600 Salix brachista HOM05D000002 ORTHO05D000001 2.3e-06 56.2 116 28.4
Sed0025154 Sechium edule HOM05D001081 ORTHO05D003320 2.3e-06 56.2 107 29.0
Ciclev10023695m.g Citrus clementina HOM05D044847 ORTHO05D000001 3.0e-06 55.8 90 35.6
Ciclev10030451m.g Citrus clementina HOM05D044847 ORTHO05D000001 3.0e-06 55.8 90 35.6
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 3.0e-06 55.8 143 28.0
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 3.9e-06 55.5 136 27.9
CANSAT11G1034 Cannabis sativa HOM05D007933 ORTHO05D000001 3.9e-06 55.5 97 33.0
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 3.9e-06 55.5 133 28.6
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 3.9e-06 55.5 96 31.2
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 5.1e-06 55.1 109 33.9
Nitab4.5_0000342g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.1e-06 55.1 80 31.2
Oeu012960.1 Olea europaea HOM05D000002 ORTHO05D000001 5.1e-06 55.1 122 31.1
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 6.6e-06 54.7 114 30.7
PSO541G5397 Papaver somniferum HOM05D000002 ORTHO05D000001 6.6e-06 54.7 127 26.0
PSO674G0121 Papaver somniferum HOM05D000002 ORTHO05D000001 6.6e-06 54.7 110 29.1
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 8.6e-06 54.3 112 32.1
MBI09_g18618_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000001 8.6e-06 54.3 99 30.3
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.6e-06 54.3 115 24.3
TAR175G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.6e-06 54.3 133 27.8


User provided reference genes

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