Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 5.3e-44 180.6 91 100.0
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.4e-33 145.2 89 76.4
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 4.2e-33 144.4 87 79.3
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 4.2e-33 144.4 87 78.2
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 5.5e-33 144.1 89 77.5
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 5.5e-33 144.1 89 74.2
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 5.5e-33 144.1 88 78.4
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 9.3e-33 143.3 88 79.5
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 9.3e-33 143.3 88 79.5
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 9.3e-33 143.3 89 75.3
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 9.3e-33 143.3 87 80.5
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 1.2e-32 142.9 89 73.0
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 1.6e-32 142.5 89 71.9
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 1.6e-32 142.5 88 77.3
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 88 78.4
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.6e-32 142.5 89 73.0
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.1e-32 142.1 88 76.1
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 2.7e-32 141.7 89 71.9
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 2.7e-32 141.7 89 71.9
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 2.7e-32 141.7 89 71.9
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 2.7e-32 141.7 89 73.0
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 2.7e-32 141.7 87 77.0
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.7e-32 141.7 87 77.0
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 2.7e-32 141.7 86 79.1
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 3.5e-32 141.4 89 75.3
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 3.5e-32 141.4 89 77.5
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 3.5e-32 141.4 89 74.2
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 3.5e-32 141.4 89 74.2
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 3.5e-32 141.4 89 76.4
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 6.0e-32 140.6 89 71.9
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 6.0e-32 140.6 89 75.3
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 6.0e-32 140.6 87 77.0
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 7.9e-32 140.2 89 73.0
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 7.9e-32 140.2 89 73.0
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 1.0e-31 139.8 89 71.9
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.0e-31 139.8 89 74.2
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 1.3e-31 139.4 89 73.0
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 88 76.1
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.3e-31 139.4 89 73.0
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 2.3e-31 138.7 88 75.0
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 2.3e-31 138.7 89 75.3
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 3.0e-31 138.3 88 75.0
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 3.9e-31 137.9 89 70.8
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.9e-31 137.9 88 73.9
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 5.1e-31 137.5 89 71.9
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 5.1e-31 137.5 89 73.0
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 6.7e-31 137.1 89 71.9
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 6.7e-31 137.1 89 70.8
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 8.7e-31 136.7 89 74.2
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 8.7e-31 136.7 89 74.2
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 8.7e-31 136.7 89 75.3
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.1e-30 136.3 89 75.3
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 1.1e-30 136.3 89 73.0
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.1e-30 136.3 89 70.8
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 1.1e-30 136.3 89 73.0
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 72.2
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 72.2
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 1.5e-30 136.0 88 73.9
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 1.9e-30 135.6 89 74.2
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.5e-30 135.2 86 75.6
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 74.4
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.3e-30 134.4 96 67.7
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 4.3e-30 134.4 89 71.9
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 4.3e-30 134.4 89 70.8
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 4.3e-30 134.4 88 71.6
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 7.4e-30 133.7 88 69.3
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 7.4e-30 133.7 87 73.6
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 7.4e-30 133.7 89 73.0
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 7.4e-30 133.7 89 69.7
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 9.6e-30 133.3 89 70.8
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 9.6e-30 133.3 89 69.7
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.3e-29 132.9 87 71.3
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.6e-29 132.5 89 68.5
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.6e-29 132.5 90 71.1
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 1.6e-29 132.5 87 71.3
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.6e-29 132.5 89 69.7
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.6e-29 132.5 88 70.5
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 2.1e-29 132.1 87 72.4
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 2.8e-29 131.7 100 66.0
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 4.8e-29 131.0 89 73.0
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 6.2e-29 130.6 88 69.3
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 6.2e-29 130.6 89 69.7
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 8.2e-29 130.2 89 67.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 8.2e-29 130.2 90 70.0
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 1.4e-28 129.4 89 73.0
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 1.8e-28 129.0 84 71.4
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 2.4e-28 128.6 89 67.4
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 2.4e-28 128.6 89 67.4
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 3.1e-28 128.3 93 67.7
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 4.0e-28 127.9 84 75.0
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 4.0e-28 127.9 88 70.5
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 5.3e-28 127.5 89 64.0
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 2.0e-27 125.6 89 65.2
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.0e-27 125.6 89 65.2
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 2.6e-27 125.2 76 78.9
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 1.1e-25 119.8 84 66.7
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 3.2e-25 118.2 97 64.9
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 3.2e-25 118.2 70 81.4
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 7.1e-25 117.1 89 66.3
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 9.3e-25 116.7 123 52.0
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 1.2e-24 116.3 84 69.0
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.1e-24 115.5 70 80.0
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 2.7e-24 115.2 70 78.6
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 7.9e-24 113.6 70 77.1
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.3e-23 112.1 69 76.8
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 1.1e-22 109.8 87 57.5
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 4.3e-22 107.8 67 76.1
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 7.4e-22 107.1 68 75.0
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.3e-21 106.3 68 73.5
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 2.2e-21 105.5 66 78.8
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 1.8e-20 102.4 71 70.4
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 1.5e-19 99.4 60 78.3
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 7.6e-19 97.1 69 63.8
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 2.9e-18 95.1 65 67.7
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 1.4e-17 92.8 56 76.8
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.9e-17 92.4 80 62.5
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 4.2e-17 91.3 78 65.4
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 1.9e-14 82.4 89 47.2
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 3.3e-14 81.6 61 70.5
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 2.2e-13 79.0 92 43.5
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.2e-10 68.9 90 43.3
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 1.4e-09 66.2 53 62.3
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.2e-08 63.2 46 60.9
Carub.0003s0674 Capsella rubella HOM05D006090 ORTHO05D007600 2.3e-07 58.9 35 74.3


User provided reference genes

Program Settings