Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.98 Acer truncatum HOM05D001543 ORTHO05D001722 8.9e-57 223.8 150 100.0
Oeu024403.4 Olea europaea HOM05D001543 ORTHO05D001722 1.3e-20 103.6 106 62.3
Manes.05G056900 Manihot esculenta HOM05D001543 ORTHO05D001722 5.1e-20 101.7 106 67.9
Nitab4.5_0000563g0160 Nicotiana tabacum HOM05D001543 ORTHO05D001722 8.7e-20 100.9 110 70.0
Peaxi162Scf00853g00434 Petunia axillaris HOM05D001543 ORTHO05D001722 1.5e-19 100.1 110 60.0
Cpa.g.c42156 Carica papaya HOM05D001543 ORTHO05D001722 1.9e-19 99.8 106 59.4
vmacro21069 Vaccinium macrocarpon HOM05D001543 ORTHO05D001722 1.9e-19 99.8 92 65.2
Nitab4.5_0004425g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 2.5e-19 99.4 110 70.0
Ca_14794_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 3.3e-19 99.0 108 62.0
Medtr8g007390 Medicago truncatula HOM05D001543 ORTHO05D001722 1.3e-18 97.1 108 62.0
Actinidia21626 Actinidia chinensis HOM05D001543 ORTHO05D001722 2.2e-18 96.3 106 60.4
Rhsim01G0141800 Rhododendron simsii HOM05D001543 ORTHO05D001722 2.8e-18 95.9 107 57.9
Prupe.2G120600 Prunus persica HOM05D001543 ORTHO05D001722 6.3e-18 94.7 129 52.7
CDE04G2807 Ceratophyllum demersum HOM05D001543 ORTHO05D001722 1.1e-17 94.0 103 61.2
Duzib138G1252 Durio zibethinus HOM05D001543 ORTHO05D001722 1.1e-17 94.0 89 58.4
Phvul.008G049100 Phaseolus vulgaris HOM05D001543 ORTHO05D001722 1.4e-17 93.6 108 58.3
FvH4_7g09210 Fragaria vesca HOM05D001543 ORTHO05D001722 2.4e-17 92.8 106 58.5
FAN03G0838 Fragaria x ananassa HOM05D001543 ORTHO05D001722 2.4e-17 92.8 106 58.5
FAN06G2038 Fragaria x ananassa HOM05D001543 ORTHO05D001722 2.4e-17 92.8 106 58.5
RcHm_v2.0_Chr1g0345261 Rosa chinensis HOM05D001543 ORTHO05D001722 2.4e-17 92.8 106 58.5
Sopen01g035640 Solanum pennellii HOM05D001543 ORTHO05D001722 3.1e-17 92.4 110 58.2
Glyma.18G248200 Glycine max HOM05D001543 ORTHO05D001722 5.3e-17 91.7 107 57.9
Glyma.09G245000 Glycine max HOM05D001543 ORTHO05D001722 6.9e-17 91.3 107 57.9
MD07G1096800 Malus domestica HOM05D001543 ORTHO05D001722 6.9e-17 91.3 91 61.5
PGR004G2018 Punica granatum HOM05D001543 ORTHO05D001722 9.0e-17 90.9 103 68.9
FAN10G3183 Fragaria x ananassa HOM05D001543 ORTHO05D001722 1.2e-16 90.5 106 57.5
Sabra14G0036500 Salix brachista HOM05D001543 ORTHO05D001722 1.2e-16 90.5 108 61.1
Sabra14G0038600 Salix brachista HOM05D001543 ORTHO05D001722 1.2e-16 90.5 108 61.1
PGSC0003DMG400001694 Solanum tuberosum HOM05D001543 ORTHO05D001722 1.2e-16 90.5 111 56.8
PGSC0003DMG400003302 Solanum tuberosum HOM05D001543 ORTHO05D001722 1.5e-16 90.1 107 58.9
Solyc10g062180.2 Solanum lycopersicum HOM05D001543 ORTHO05D001722 3.4e-16 89.0 106 53.8
Glyma.07G119000 Glycine max HOM05D001543 ORTHO05D001722 5.9e-16 88.2 108 57.4
AUR62043413 Chenopodium quinoa HOM05D001543 ORTHO05D001722 7.6e-16 87.8 105 59.0
CDE12G0756 Ceratophyllum demersum HOM05D001543 ORTHO05D001722 1.0e-15 87.4 103 57.3
Oeu018078.2 Olea europaea HOM05D001543 ORTHO05D001722 1.0e-15 87.4 133 47.4
Peaxi162Scf00103g01116 Petunia axillaris HOM05D001543 ORTHO05D001722 1.0e-15 87.4 106 53.8
Sopen00g003100 Solanum pennellii HOM05D001543 ORTHO05D001722 1.0e-15 87.4 107 57.9
QL04p028571 Quercus lobata HOM05D001543 ORTHO05D001722 1.7e-15 86.7 115 53.9
VMungo0331G0452 Vigna mungo HOM05D001543 ORTHO05D001722 2.2e-15 86.3 111 57.7
Psat2g160240 Pisum sativum HOM05D001543 ORTHO05D001722 2.9e-15 85.9 108 57.4
Psat6g092200 Pisum sativum HOM05D001543 ORTHO05D001722 2.9e-15 85.9 108 57.4
Sopen10g026850 Solanum pennellii HOM05D001543 ORTHO05D001722 3.8e-15 85.5 106 52.8
PGSC0003DMG400003492 Solanum tuberosum HOM05D001543 ORTHO05D001722 3.8e-15 85.5 106 63.2
Migut.B01504 Erythranthe guttata HOM05D001543 ORTHO05D001722 5.0e-15 85.1 110 54.5
SalBow5G2614 Salvia bowleyana HOM05D001543 ORTHO05D001722 5.0e-15 85.1 103 54.4
TAR636G0309 Trochodendron aralioides HOM05D001543 ORTHO05D001722 5.0e-15 85.1 92 58.7
Ah.05g177760 Amaranthus hybridus HOM05D001543 ORTHO05D001722 8.5e-15 84.3 109 57.8
Ciclev10018944m.g Citrus clementina HOM05D001543 ORTHO05D001722 8.5e-15 84.3 106 55.7
Nn6g33745 Nelumbo nucifera HOM05D001543 ORTHO05D001722 1.1e-14 84.0 106 62.3
Phvul.010G044700 Phaseolus vulgaris HOM05D001543 ORTHO05D001722 1.1e-14 84.0 108 56.5
CiPaw.13G024300 Carya illinoinensis HOM05D001543 ORTHO05D001722 1.4e-14 83.6 107 59.8
SGA_v2.0_scaffold52G19257 Striga asiatica HOM05D001543 ORTHO05D001722 1.4e-14 83.6 91 67.0
HPP92_002460 Vanilla planifolia HOM05D001543 ORTHO05D001722 4.2e-14 82.0 108 49.1
Hma1.2p1_0270F.1_g108210 Hydrangea macrophylla HOM05D001543 ORTHO05D001722 9.3e-14 80.9 115 61.7
Nitab4.5_0000228g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 2.1e-13 79.7 112 62.5
HPP92_002474 Vanilla planifolia HOM05D001543 ORTHO05D001722 2.1e-13 79.7 108 48.1
PSO782G5099 Papaver somniferum HOM05D001543 ORTHO05D001722 4.6e-13 78.6 108 51.9
FAN01G1148 Fragaria x ananassa HOM05D001543 ORTHO05D001722 6.1e-13 78.2 106 52.8
Lj1g0023999 Lotus japonicus HOM05D001543 ORTHO05D001722 6.1e-13 78.2 93 61.3
VMungo1383G3467 Vigna mungo HOM05D001543 ORTHO05D001722 1.0e-12 77.4 106 58.5
TWI23G1103 Tripterygium wilfordii HOM05D001543 ORTHO05D001722 2.3e-12 76.3 108 56.5
Lj7A549T58 Lonicera japonica HOM05D001543 ORTHO05D001722 6.7e-12 74.7 92 65.2
Medtr7g081210 Medicago truncatula HOM05D001543 ORTHO05D001722 6.7e-12 74.7 105 54.3
Lalb_Chr19g0126391 Lupinus albus HOM05D001543 ORTHO05D001722 8.8e-12 74.3 107 51.4
MBI04_g38565_MAGBIO Magnolia biondii HOM05D001543 ORTHO05D001722 8.8e-12 74.3 107 49.5
Aqoxy3G02626 Aquilegia oxysepala HOM05D001543 ORTHO05D001722 1.5e-11 73.6 103 59.2
SGA_v2.0_scaffold340G49337 Striga asiatica HOM05D001543 ORTHO05D001722 1.5e-11 73.6 105 56.2
Ca_08046_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 2.5e-11 72.8 82 56.1
Ca_08052_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 2.5e-11 72.8 82 56.1
Solyc10g062340.2 Solanum lycopersicum HOM05D001543 ORTHO05D001722 4.3e-11 72.0 68 61.8
TPR.G32125 Trifolium pratense HOM05D001543 ORTHO05D001722 7.4e-11 71.2 108 59.3
TWI59G0607 Tripterygium wilfordii HOM05D001543 ORTHO05D001722 7.4e-11 71.2 92 57.6
COL.COLO4_12374 Corchorus olitorius HOM05D001543 ORTHO05D001722 9.7e-11 70.9 106 55.7
AUR62023388 Chenopodium quinoa HOM05D001543 ORTHO05D001722 1.7e-10 70.1 106 61.3
FAN10G3391 Fragaria x ananassa HOM05D001543 ORTHO05D001722 2.2e-10 69.7 106 60.4
Carub.0004s2727 Capsella rubella HOM05D001543 ORTHO05D001722 2.8e-10 69.3 106 56.6
DCAR_029504 Daucus carota HOM05D001543 ORTHO05D001722 2.8e-10 69.3 112 52.7
ECA248G1955 Erigeron canadensis HOM05D001543 ORTHO05D001722 3.7e-10 68.9 109 58.7
TAR374G0507 Trochodendron aralioides HOM05D001543 ORTHO05D001722 8.2e-10 67.8 106 61.3
arahy.Tifrunner.gnm1.ann1.D07A28 Arachis hypogaea HOM05D001543 ORTHO05D001722 1.1e-09 67.4 85 50.6
AUR62013767 Chenopodium quinoa HOM05D001543 ORTHO05D001722 1.1e-09 67.4 106 60.4
GSVIVG01018314001 Vitis vinifera HOM05D001543 ORTHO05D001722 1.1e-09 67.4 106 49.1
Hma1.2p1_1882F.1_g306400 Hydrangea macrophylla HOM05D001543 ORTHO05D001722 1.8e-09 66.6 42 83.3
TPR.G25979 Trifolium pratense HOM05D001543 ORTHO05D001722 2.4e-09 66.2 105 51.4
Actinidia12638 Actinidia chinensis HOM05D001543 ORTHO05D001722 3.1e-09 65.9 68 63.2
Gohir.A11G074600 Gossypium hirsutum HOM05D001543 ORTHO05D001722 3.1e-09 65.9 74 70.3
Potri.002G139700 Populus trichocarpa HOM05D001543 ORTHO05D001722 3.1e-09 65.9 41 78.0
arahy.Tifrunner.gnm1.ann1.SVU6LR Arachis hypogaea HOM05D001543 ORTHO05D001722 4.1e-09 65.5 87 51.7
Cpa.g.sc41.80 Carica papaya HOM05D001543 ORTHO05D001722 4.1e-09 65.5 68 54.4
Lj9A553G38 Lonicera japonica HOM05D001543 ORTHO05D001722 4.1e-09 65.5 68 55.9
Solyc01g088800.4 Solanum lycopersicum HOM05D001543 ORTHO05D001722 9.1e-09 64.3 46 76.1
Nitab4.5_0002106g0030 Nicotiana tabacum HOM05D001543 ORTHO05D001722 1.2e-08 63.9 74 66.2
Lj3g0023648 Lotus japonicus HOM05D001543 ORTHO05D001722 3.4e-08 62.4 109 55.0
Lalb_Chr12g0210441 Lupinus albus HOM05D001543 ORTHO05D001722 3.4e-08 62.4 72 70.8
unitig_22.g5409 Utricularia gibba HOM05D001543 ORTHO05D001722 3.4e-08 62.4 103 59.2
CANSAT25G3262 Cannabis sativa HOM05D001543 ORTHO05D001722 4.5e-08 62.0 106 52.8
SHI13633 Sapria himalayana HOM05D001543 ORTHO05D001722 4.5e-08 62.0 94 45.7
CSS0014924 Camellia sinensis var. sinensis HOM05D001543 ORTHO05D001722 5.9e-08 61.6 106 57.5
BcaB02g08849 Brassica carinata HOM05D001543 ORTHO05D001722 1.0e-07 60.8 124 41.1
MELO3C006286.2 Cucumis melo HOM05D001543 ORTHO05D001722 1.7e-07 60.1 108 47.2
Hund17112 Selenicereus undatus HOM05D001543 ORTHO05D001722 1.7e-07 60.1 107 57.0
Psat3g099600 Pisum sativum HOM05D001543 ORTHO05D001722 2.9e-07 59.3 105 49.5
Potri.014G051500 Populus trichocarpa HOM05D001543 ORTHO05D001722 5.0e-07 58.5 108 45.4
PSO063G5496 Papaver somniferum HOM05D001543 ORTHO05D001722 6.5e-07 58.2 42 64.3
HanXRQChr01g0019921 Helianthus annuus HOM05D001543 ORTHO05D001722 8.5e-07 57.8 46 73.9
Lalb_Chr07g0195281 Lupinus albus HOM05D001543 ORTHO05D001722 3.2e-06 55.8 107 41.1
AL4G43770 Arabidopsis lyrata HOM05D001543 ORTHO05D001722 7.2e-06 54.7 42 66.7
AT2G44710 Arabidopsis thaliana HOM05D001543 ORTHO05D001722 7.2e-06 54.7 42 66.7
Haze_02878 Corylus avellana HOM05D001543 ORTHO05D001722 7.2e-06 54.7 45 75.6
Glyma.03G107700 Glycine max HOM05D001543 ORTHO05D001722 9.4e-06 54.3 108 46.3
Zm00001eb075060 Zea mays HOM05D001543 ORTHO05D001722 9.4e-06 54.3 108 47.2


User provided reference genes

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