Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr5.927 Acer truncatum HOM05D008191 ORTHO05D010044 9.7e-98 360.1 183 100.0
Atru.chr5.928 Acer truncatum HOM05D008191 ORTHO05D010044 2.0e-42 176.4 164 54.3
COL.COLO4_23184 Corchorus olitorius HOM05D008191 ORTHO05D010044 4.6e-31 138.7 176 42.6
Thecc.01G319900 Theobroma cacao HOM05D008191 ORTHO05D010044 7.9e-31 137.9 173 43.4
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 1.3e-30 137.1 181 42.0
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 3.9e-30 135.6 172 40.1
Ciclev10024443m.g Citrus clementina HOM05D008191 ORTHO05D010044 1.3e-28 130.6 156 41.0
Potri.002G191500 Populus trichocarpa HOM05D008191 ORTHO05D010044 2.8e-28 129.4 156 41.0
Gorai.001G145900 Gossypium raimondii HOM05D008191 ORTHO05D010044 3.7e-28 129.0 138 42.0
Gohir.A07G130033 Gossypium hirsutum HOM05D008191 ORTHO05D010044 4.8e-28 128.6 138 42.0
Gohir.D07G134300 Gossypium hirsutum HOM05D008191 ORTHO05D010044 8.1e-28 127.9 138 42.0
Gohir.A11G107700 Gossypium hirsutum HOM05D008191 ORTHO05D010044 1.1e-24 117.5 175 39.4
Cfa004856 Carpinus fangiana HOM05D012615 ORTHO05D010044 2.4e-24 116.3 169 35.5
Cpa.g.c31737 Carica papaya HOM05D008191 ORTHO05D010044 4.2e-24 115.5 175 36.6
COL.COLO4_23185 Corchorus olitorius HOM05D008191 ORTHO05D010044 5.5e-24 115.2 177 38.4
RcHm_v2.0_Chr3g0486661 Rosa chinensis HOM05D008191 ORTHO05D010044 6.0e-23 111.7 157 40.1
PSO724G1245 Papaver somniferum HOM05D008191 ORTHO05D010044 4.8e-20 102.1 174 32.8
QL05p060436 Quercus lobata HOM05D012615 ORTHO05D010044 2.4e-19 99.8 162 34.6
PSO620G0001 Papaver somniferum HOM05D008191 ORTHO05D010044 3.1e-19 99.4 166 31.9
QL01p035229 Quercus lobata HOM05D012615 ORTHO05D010044 9.0e-19 97.8 176 34.1
QL09p000952 Quercus lobata HOM05D012615 ORTHO05D010044 1.2e-18 97.4 170 31.8
QL02p008132 Quercus lobata HOM05D012615 ORTHO05D010044 5.5e-16 88.6 160 32.5
THA.LOC104827389 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 1.2e-15 87.4 167 30.5
Carub.0004s1276 Capsella rubella HOM05D008191 ORTHO05D010044 1.0e-14 84.3 175 30.3
Gorai.007G120800 Gossypium raimondii HOM05D008191 ORTHO05D010044 1.8e-14 83.6 168 33.3
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 3.9e-14 82.4 171 29.8
PSO729G0168 Papaver somniferum HOM05D008191 ORTHO05D010044 4.3e-13 79.0 170 31.2
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.2e-12 76.6 172 30.2
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 3.7e-12 75.9 170 29.4
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 1.1e-11 74.3 172 29.1
MBI19_g08236_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D010044 9.0e-11 71.2 159 31.4
PSO724G0909 Papaver somniferum HOM05D008191 ORTHO05D010044 6.5e-09 65.1 153 27.5
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 1.1e-08 64.3 173 26.6
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 1.9e-08 63.5 122 30.3
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 1.9e-08 63.5 153 27.5
PGSC0003DMG400037039 Solanum tuberosum HOM05D004113 ORTHO05D005233 3.2e-08 62.8 162 25.3
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 4.2e-08 62.4 152 27.0
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 4.2e-08 62.4 152 27.0
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.5e-08 62.0 143 28.7
Rhsim03G0038400 Rhododendron simsii HOM05D001578 ORTHO05D001207 7.2e-08 61.6 153 30.1
Rhsim03G0038600 Rhododendron simsii HOM05D000036 ORTHO05D005472 7.2e-08 61.6 164 29.3
Rhsim03G0038700 Rhododendron simsii HOM05D001578 ORTHO05D001207 7.2e-08 61.6 157 30.6
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.4e-08 61.2 188 28.7
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 9.4e-08 61.2 188 28.7
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 2.1e-07 60.1 171 24.0
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 3.6e-07 59.3 156 30.1
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.6e-07 58.9 148 25.0
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 6.1e-07 58.5 168 27.4
vmacro15637 Vaccinium macrocarpon HOM05D000074 ORTHO05D001262 7.9e-07 58.2 96 35.4
Haze_05101 Corylus avellana HOM05D012615 ORTHO05D010044 1.0e-06 57.8 80 37.5
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.4e-06 57.4 150 25.3
Nitab4.5_0001270g0060 Nicotiana tabacum HOM05D004113 ORTHO05D005233 1.8e-06 57.0 102 31.4
A01p37140 Brassica napus HOM05D009524 ORTHO05D001207 2.3e-06 56.6 148 29.1
BraA01t03775Z Brassica rapa HOM05D009524 ORTHO05D001207 2.3e-06 56.6 148 29.1
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 3.0e-06 56.2 171 29.8
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 3.9e-06 55.8 151 25.2
Thecc.01G317500 Theobroma cacao HOM05D001578 ORTHO05D001207 5.1e-06 55.5 95 33.7
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 6.7e-06 55.1 138 26.8


User provided reference genes

Program Settings